Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001135-TA|BGIBMGA001135-PA|undefined
(996 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0026 + 219663-220843,222201-222447,222574-224535 35 0.37
11_01_0026 + 193383-194566,195726-195972,196099-198063 33 0.86
05_01_0251 + 1901709-1901864,1901968-1901999,1902534-1902664,190... 33 1.5
09_04_0687 + 19465594-19465780,19465994-19466022,19466731-194668... 32 2.0
04_03_0904 + 20717005-20718087 32 2.0
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 32 2.6
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 32 2.6
08_01_0620 - 5416197-5416225,5416333-5416652,5417144-5417235,541... 31 3.5
12_02_0133 - 14057469-14057497,14057516-14057581,14057770-140583... 31 4.6
09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397... 31 4.6
03_02_0762 - 10968888-10969466,10972522-10974175,10974277-109743... 31 4.6
09_04_0377 + 17086775-17088310 31 6.1
08_02_1508 + 27602104-27602265,27602398-27602449,27603357-276047... 31 6.1
05_03_0475 + 14486969-14487140,14487215-14487338,14487424-144875... 31 6.1
08_02_1013 + 23554996-23555139,23555456-23555541,23556375-235563... 30 8.0
08_01_1069 + 10916376-10916448,10917331-10918031,10918222-109184... 30 8.0
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 30 8.0
02_04_0206 + 20916063-20919669,20919816-20920014,20920935-209210... 30 8.0
>12_01_0026 + 219663-220843,222201-222447,222574-224535
Length = 1129
Score = 34.7 bits (76), Expect = 0.37
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 525 TNPLLDDTQLNDISPQARSDNDLELSGSQSGPGTLLDNDTEDN--SIEKLPPVETLKVEI 582
TN +D LN + ++SD +L+ G QS GTL + D D+ S PVET + +
Sbjct: 570 TNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNADNPDDHASPSSAAPVET-DLVL 628
Query: 583 STPADFS 589
TP D S
Sbjct: 629 CTPRDCS 635
>11_01_0026 + 193383-194566,195726-195972,196099-198063
Length = 1131
Score = 33.5 bits (73), Expect = 0.86
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 525 TNPLLDDTQLNDISPQARSDNDLELSGSQSGPGTL--LDNDTEDNSIEKLPPVETLKVEI 582
TN +D LN + ++SD +L+ G QS GTL +DN + S PVET + +
Sbjct: 571 TNKRNEDLVLNLQARHSKSDENLQERGMQSQHGTLSNVDNPDDHVSPSSAAPVET-DLVL 629
Query: 583 STPADFS 589
TP + S
Sbjct: 630 GTPRECS 636
>05_01_0251 +
1901709-1901864,1901968-1901999,1902534-1902664,
1902740-1902821,1902928-1903054,1903369-1903686,
1903785-1903846,1903988-1904074,1904139-1904195,
1906113-1906197,1906916-1907185,1908158-1908254,
1908390-1908436,1908826-1908939,1909024-1909117,
1909360-1909457,1910356-1910455,1911445-1911521,
1911824-1913122
Length = 1110
Score = 32.7 bits (71), Expect = 1.5
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 543 SDNDLELSGSQSGP-GTLLDNDTEDNSIEKLPPVETLKVEISTPADFS 589
S + L+ SGS+SG G L D+D E+NS P E ++ +I AD S
Sbjct: 515 SQSALQKSGSESGSLGDLFDSDNEENSSHFAPRKEVIQ-DIKVEADSS 561
>09_04_0687 +
19465594-19465780,19465994-19466022,19466731-19466803,
19467237-19467311,19467583-19467644,19467727-19467795,
19468447-19468475,19468553-19468760,19468867-19469100,
19469591-19470598
Length = 657
Score = 32.3 bits (70), Expect = 2.0
Identities = 49/217 (22%), Positives = 80/217 (36%), Gaps = 16/217 (7%)
Query: 482 SLYKFTLNRTPGSGRWQYKTSPKP-KVTIRKAVSEEELQQTTPNTNPL---LDDTQLNDI 537
+ Y L + G + P P +++ +V +E TT L L D L
Sbjct: 405 AFYSSPLQPSTNVGDLRDNKLPSPTRLSNAHSVLKESNTNTTDTRTMLVLPLGDLSLPGY 464
Query: 538 SPQARSDNDLELSGSQSGPGTLLDNDTEDNSIEKLPPVETLKVEISTPADFSDVYYEIAT 597
SDN GS SGP TE+ + +PP + + S ++ ++
Sbjct: 465 HDSKASDNKKVKRGSFSGPIVPRSRSTENIDVVSVPPRHSSSHQPS-------IHVRVSP 517
Query: 598 IKSPYTFQVGRVKNTRVITVTSTIEKRLEPTVAPSQISLNEPLTENILATASPYGKDHNL 657
SP ++K + + T PS ++ + PL N A +P G+DH
Sbjct: 518 NTSPPLLSSPKIKELHELPRPPA--NASKHTTFPSLVAHSAPLVPN-SAPLAPRGQDHFR 574
Query: 658 DSSIATLPAITLPSDMETPPLETITETFSTTQNMLKT 694
A S + TPP I+ +FS ++T
Sbjct: 575 PRQTPP-SAPQTASPLPTPP-GPISRSFSIPSRGMRT 609
>04_03_0904 + 20717005-20718087
Length = 360
Score = 32.3 bits (70), Expect = 2.0
Identities = 20/74 (27%), Positives = 31/74 (41%)
Query: 450 TPANNNENQSRRGFKPRAQPSPVEQVTPAPSTSLYKFTLNRTPGSGRWQYKTSPKPKVTI 509
TPA + +KP+ +P+P P P + +T TP S + Q K +P P
Sbjct: 133 TPAPYTPTPTPPTYKPQPKPTPPPTYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPT 192
Query: 510 RKAVSEEELQQTTP 523
S + + TP
Sbjct: 193 PTPPSYKPQPKPTP 206
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 321 SPSPTHRILKTAAPAISKNHRHNLEPTPSISDDDSSFGKTSRRQTISGSSFKNRHRSQNF 380
S S + + T APA++K + E + S SD DS ++ K S +
Sbjct: 225 SDSESDEDVPTKAPAVAKKKEESSESSDSESDSDSDDEAAKTIIPAKAAAVKKEEESSDS 284
Query: 381 AENDNHDNSPANQSKK 396
+++D+ S +++ K
Sbjct: 285 SDSDSESESDSDEPAK 300
>01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 31.9 bits (69), Expect = 2.6
Identities = 17/79 (21%), Positives = 35/79 (44%)
Query: 326 HRILKTAAPAISKNHRHNLEPTPSISDDDSSFGKTSRRQTISGSSFKNRHRSQNFAENDN 385
HR A + S NH+H + S DD++ G+ + + HR + + +
Sbjct: 1266 HRSSDEDATSDSNNHKHRRSRSLEESSDDAAAGEYEKVRNGKRPHKTGHHRHHHRHHHHH 1325
Query: 386 HDNSPANQSKKFKNRNAQR 404
HD+ +++ K ++ Q+
Sbjct: 1326 HDHRSSSEPNDKKRQDGQK 1344
>08_01_0620 -
5416197-5416225,5416333-5416652,5417144-5417235,
5417304-5417394,5417489-5417577,5417812-5417929,
5418007-5418098,5418180-5418215,5418323-5418403,
5418510-5418617,5418809-5418901,5419045-5419146,
5419345-5419449,5419526-5419612,5419952-5420227
Length = 572
Score = 31.5 bits (68), Expect = 3.5
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 171 KVEVKQGTPPSIISSKINSVVQVKSSQSDEEPAILISNNNL--GEP-EYDFLSRQPSEFV 227
KV+VK+ T P S + S D +PA ++NN L G+P D S E
Sbjct: 94 KVQVKKTTKPVKQESSSDESSDESSDDEDAKPADPVANNGLKKGKPASSDSESDSDDEMD 153
Query: 228 EETYKVINIRPSKTHGSKPKHAHKNRAHQPSPPSDDDE 265
E+ ++ + K K + + S SD DE
Sbjct: 154 EDEKPAAPVKKTSVTAQKKKD-DSDSSESESDESDSDE 190
>12_02_0133 -
14057469-14057497,14057516-14057581,14057770-14058363,
14058450-14058570,14058926-14059320,14059410-14059534,
14059646-14059876,14060012-14060484,14060587-14060693,
14060842-14061172,14061222-14061250,14061345-14061901,
14062170-14062255,14062344-14062406,14062646-14063001,
14063101-14063356
Length = 1272
Score = 31.1 bits (67), Expect = 4.6
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 343 NLEPTPSISDDDSSF--GKTSRRQTISGSSFKNRHRSQNFAENDNHDNSPANQSKKFKNR 400
N + S D+ S GK S+ T + KNR +N EN+N D N + + N
Sbjct: 310 NASKSNSYEDETSKALEGKISKPDT----ALKNRSSFENEVENENGDKKELNSTNQCNNS 365
Query: 401 NAQR 404
N++R
Sbjct: 366 NSKR 369
>09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,
3973665-3973982,3974565-3974763,3974937-3975202,
3975288-3975574,3976714-3977818,3977900-3978046,
3978146-3978226,3978315-3978540,3978622-3978761,
3979539-3979645,3979739-3979841
Length = 3638
Score = 31.1 bits (67), Expect = 4.6
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 178 TPPSIISSKINSVVQVKSSQSDEEPAILISNNNLGEPEYDFLSRQPSEFVEE 229
T P + S I ++V++ S++ E A+ N E D+L P EFV+E
Sbjct: 1201 TSPPLDESSIATIVEMGFSRARAEEALRSVRTNSVEMATDWLFSHPEEFVQE 1252
>03_02_0762 -
10968888-10969466,10972522-10974175,10974277-10974359,
10974435-10974533,10974620-10974706,10974782-10974838,
10974939-10975065,10975344-10975465,10975685-10975732,
10975867-10976268
Length = 1085
Score = 31.1 bits (67), Expect = 4.6
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 337 SKNHRHNLEPTPSISDDDSSFGKTSRRQTISGSSFKNRHRSQNFAENDNHDNSPANQSKK 396
SK H P+P+ D + K ++RQ + + RS N ++D+H + +++KK
Sbjct: 454 SKGESHRYTPSPA----DDRYHKATKRQRMDEAGACISSRSLNNCQSDHHLHESGHRAKK 509
Query: 397 -FKNRNAQRTPSTRFGRPANT 416
K ++ F R NT
Sbjct: 510 ELKRQSLAGGKHALFERQENT 530
>09_04_0377 + 17086775-17088310
Length = 511
Score = 30.7 bits (66), Expect = 6.1
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 313 PAGHRAKISPSPTHRILKTAAPAISKNHRHNLEPTP--SISDDDSSFGKTSRRQTISGSS 370
P R SPSP R + +P+ +N R + P+P S D S + RRQ
Sbjct: 15 PGRSRVSASPSPRRRRSPSRSPSPRRNRRRDRSPSPYRSRRDRSPSPYRDRRRQWSPYHR 74
Query: 371 FKNRHRSQNFAENDNH 386
+ R + +A + +H
Sbjct: 75 DRGRDVEREWARDRDH 90
>08_02_1508 +
27602104-27602265,27602398-27602449,27603357-27604757,
27604833-27606140,27606594-27607435
Length = 1254
Score = 30.7 bits (66), Expect = 6.1
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 3/103 (2%)
Query: 330 KTAAPAISKNHRHNLEPTPSISDDDSSFGKTSRRQTISGSSFKNRHRSQNFAENDNHDN- 388
+T P S H L+P + S + + + +SF ++ +E D
Sbjct: 234 QTELPQTSVGHTIRLDPRQTTSTESRTVLVPPPSAGMISTSFSSQREQPLPSETIRQDKP 293
Query: 389 SPANQSKKFKNRNAQRTPSTRFGRPANTAQLATVSVFSETATP 431
SP +S F ++TPST R T + + + F+ + TP
Sbjct: 294 SPRKESNFFTT--TEKTPSTPRSRAPTTQKQPSSTFFTPSTTP 334
>05_03_0475 +
14486969-14487140,14487215-14487338,14487424-14487559,
14487663-14488997
Length = 588
Score = 30.7 bits (66), Expect = 6.1
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 9/113 (7%)
Query: 314 AGHRAKISPSPTHRILKTAAPAISKNHRHNL---EPTPSISDDDSSFGKTSRRQTIS--- 367
AGH +P P+ ++AP N R L E P S S TS+ T++
Sbjct: 117 AGHHVSAAPPPSRLERASSAPYAKGNSRLPLTRRENGPPASRLSRSSSATSQLSTVAHAP 176
Query: 368 GSSFKNRHRSQNFAENDNHDNSPANQSKKFKNRNAQ---RTPSTRFGRPANTA 417
G+ F R + + + + S + + +A RTP+T G PA A
Sbjct: 177 GTVFSGRRTLSSASVSSINTASSTSVGSTPRGSSASTSPRTPATARGAPAGAA 229
>08_02_1013 +
23554996-23555139,23555456-23555541,23556375-23556399,
23556655-23556711,23556795-23556852,23557767-23558614,
23558862-23558921
Length = 425
Score = 30.3 bits (65), Expect = 8.0
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 353 DDSSFGKTSRRQTISGSSFKNRHRSQNFAENDNHDNSP 390
+ S+ + SR+ I +S + R+++ +E NHDNSP
Sbjct: 359 ESSNITQRSRKGRIDQASSNGKKRAKDTSETMNHDNSP 396
>08_01_1069 +
10916376-10916448,10917331-10918031,10918222-10918443,
10918526-10919351,10919437-10919574,10920431-10920569,
10920655-10920781,10921895-10921936,10922089-10922160,
10922491-10922589,10922694-10922735,10922947-10923027,
10923129-10923179,10923265-10923346,10923741-10923835,
10924739-10924810,10924907-10925023,10925176-10925244,
10925507-10925573,10925709-10925950
Length = 1118
Score = 30.3 bits (65), Expect = 8.0
Identities = 18/78 (23%), Positives = 35/78 (44%)
Query: 497 WQYKTSPKPKVTIRKAVSEEELQQTTPNTNPLLDDTQLNDISPQARSDNDLELSGSQSGP 556
W T+ + ++ S E +Q +P D L+ ISP + +++E S +
Sbjct: 375 WLDPTADAAALLFQQLTSSENIQLRKGLLSPNKKDFHLSSISPTKKQSDNVEDKLSNAEL 434
Query: 557 GTLLDNDTEDNSIEKLPP 574
T+ + E+N ++ L P
Sbjct: 435 STIYVHKQENNDVQGLIP 452
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 30.3 bits (65), Expect = 8.0
Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Query: 337 SKNHRHNLEPTPSISDDDSSFGKTSRRQTISGSSFKNRHRSQNF-AENDNHDNSPANQSK 395
S +HRH + S+ GK+ ++T S R +++ + +D+ D+S S
Sbjct: 213 SSDHRHKRRKSSKKDKHRSAKGKSKHKKTKRKSRGTKRKSKRSYRSSSDDSDSSKTGGSS 272
Query: 396 KFKNRNAQRTPSTRFGRPANTAQLATVSV 424
+RT T+ + T+S+
Sbjct: 273 SDSESEGRRTTRTKHSSKKDPDNTKTISL 301
>02_04_0206 + 20916063-20919669,20919816-20920014,20920935-20921074,
20921184-20921263,20922759-20922875,20923089-20923136,
20923509-20923601,20923881-20923958,20924114-20924218,
20924543-20925212,20925253-20925350,20925887-20925963,
20926035-20926117,20926208-20926287,20927060-20927139,
20927698-20927743,20928709-20929181,20929234-20929579
Length = 2139
Score = 30.3 bits (65), Expect = 8.0
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 543 SDNDLELSGSQSGPGTLLDNDTEDNSIEKLPPVETLKVEISTPADFS 589
S N EL Q GTL D +NS+E L P + V + TP S
Sbjct: 1585 SVNPPELESEQQTSGTLFDTSEPENSLEALSPQDDEDV-VRTPVHVS 1630
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.309 0.127 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,512,262
Number of Sequences: 37544
Number of extensions: 1125034
Number of successful extensions: 2643
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2626
Number of HSP's gapped (non-prelim): 30
length of query: 996
length of database: 14,793,348
effective HSP length: 89
effective length of query: 907
effective length of database: 11,451,932
effective search space: 10386902324
effective search space used: 10386902324
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 65 (30.3 bits)
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