Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001134-TA|BGIBMGA001134-PA|undefined
(177 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_27757| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_49641| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_25818| Best HMM Match : Pkinase (HMM E-Value=1.7e-20) 30 0.93
SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 30 1.2
SB_47133| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_14947| Best HMM Match : TSP_1 (HMM E-Value=6.8e-21) 29 1.6
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 29 2.8
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 28 3.7
SB_18624| Best HMM Match : EGF (HMM E-Value=7.8e-06) 28 3.7
SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09) 28 3.7
SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018) 28 5.0
SB_30396| Best HMM Match : M20_dimer (HMM E-Value=4e-08) 28 5.0
SB_7778| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_24569| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_52084| Best HMM Match : Vicilin_N (HMM E-Value=1.7) 27 8.7
SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_31639| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 27 8.7
SB_7746| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 31.9 bits (69), Expect = 0.30
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 83 RQSSHSKPASQPQQDHRSRLTR-FLALRHAPTLPHRAAFKLSLDSPQTSSSTGDNHAAFK 141
++ S +P++Q + R + +R F+ + A +P+ S + SSS+ N +
Sbjct: 78 KRVSSEQPSNQKSESWRFKSSRMFVYILIAFLVPYVTCTSSSSSNSSRSSSSSSNSNSNS 137
Query: 142 LSLDSPQASSSTGPCKLISARTTLTKNDTTSS 173
S S +SSS+G ++ + N ++SS
Sbjct: 138 SSSSSSSSSSSSGSSSSSNSNSNSNSNSSSSS 169
>SB_27757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 30.7 bits (66), Expect = 0.70
Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 5/93 (5%)
Query: 71 NPPAFSQIKASHRQSSHSKPASQPQQDHRSRLTRFLALRHAPTLPHRAAFKLSLDSPQTS 130
NP +S + +++P Q QQ HR + + T P A + + P
Sbjct: 155 NPNNYSSQSGASMMQGYTQPLLQQQQSHRLH----VPTSNPSTTPFTHALPSTAEQPNED 210
Query: 131 SSTGDNHAAFKLSLDSPQASSSTGPCKLISART 163
TGD + +P S +T +I+ RT
Sbjct: 211 GRTGDEYGTNGYGRGTP-LSRTTNHGTIINGRT 242
>SB_49641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 755
Score = 30.7 bits (66), Expect = 0.70
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 100 SRLTRFLALRHAPTLPHRAAF-KLSLDSPQTSSS--TGDNHAAFKLSLDSPQASSSTGPC 156
++ TRF ++ + RA K + SP +SSS TG + + A+++TG
Sbjct: 259 AKTTRFSTVKTSTKTSTRAGLTKAATTSPNSSSSLSTGKARTTEATTTGTTAATATTGTT 318
Query: 157 KLISARTTLTKNDTTSS 173
+ +S+++ ++ TTS+
Sbjct: 319 EALSSQSVISNASTTST 335
>SB_25818| Best HMM Match : Pkinase (HMM E-Value=1.7e-20)
Length = 956
Score = 30.3 bits (65), Expect = 0.93
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 67 FGYQNPPAFSQIKASHRQSSHSKPASQPQQDHRSRLTRFLALRHAPTL 114
+G PP++S++ S P+S+PQ +H+S + +A P L
Sbjct: 280 YGPVEPPSYSELGPPPAYSPSDIPSSEPQYEHKSHSSEGVASDLGPGL 327
>SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 659
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/61 (29%), Positives = 25/61 (40%)
Query: 113 TLPHRAAFKLSLDSPQTSSSTGDNHAAFKLSLDSPQASSSTGPCKLISARTTLTKNDTTS 172
T P A S P TS+ + + PQ SS+ GP + + T DTTS
Sbjct: 317 TTPSPQAQTSSTTGPTTSTQPQTSSTVGPTTPTQPQTSSTVGPTTSTQTQASSTVGDTTS 376
Query: 173 S 173
+
Sbjct: 377 T 377
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 127 PQTSSSTGDNHAAFKLSLDSPQASSSTGPCKLISARTTLTKNDTTSS 173
PQTSS+TG + L+ ++S+TGP +T+ TTS+
Sbjct: 407 PQTSSTTGSS----TLTQPETSSTSNTGPTTSTQTQTSSNTGPTTST 449
>SB_47133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 29.5 bits (63), Expect = 1.6
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 112 PTLPHRAAFKLSLDSPQTSSSTGDNHAAFKLSLDSPQASSSTGPCKLISARTTLTKNDTT 171
PT H+ S+ SP +S+ST H S+ +P S+T P + S TT T TT
Sbjct: 43 PTTQHQVT-TTSVSSPTSSTST-TQHQVTTTSVSTP---STTTPPRTTSISTTKTTRVTT 97
Query: 172 SS 173
S+
Sbjct: 98 ST 99
>SB_14947| Best HMM Match : TSP_1 (HMM E-Value=6.8e-21)
Length = 666
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 108 LRHAPTLPHRAAFKLSLDSPQTSSSTGDNHA 138
L HAPT H+ A K + + P S G HA
Sbjct: 11 LAHAPTPNHQVAVKTAWEMPSRLGSAGKRHA 41
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 28.7 bits (61), Expect = 2.8
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 59 IHHQRIK---NFGYQNPPAFSQIKASHRQSSHSKPASQPQQDHRSRLTRFLALRHAPTLP 115
+HH+ + GY++ S A HR+S + P++ RSR R +P+
Sbjct: 193 VHHRSLSPEPRRGYRDQRRRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPH 252
Query: 116 HRAAFKLSLD-SPQT--SSSTGDNHAAFKLSLDSPQ 148
HR+ S SP+ S S H + SP+
Sbjct: 253 HRSHRSRSRSRSPRRRHSRSRSPTHRRHRSRSHSPE 288
>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
Length = 240
Score = 28.7 bits (61), Expect = 2.8
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 70 QNPPAFSQIKASHRQSSHSKPASQPQQDHRSRLTRFLALRHAP-TLPHRAAFKLSLDSPQ 128
Q P S+ K S + S + + + R+ L R +L+ +P T P K SP+
Sbjct: 63 QTSPKTSR-KTSKKTSQKTSLNASRKTSRRTSLKR--SLKTSPKTSPKTMRMKSLKTSPK 119
Query: 129 TSSSTGDNHAAFKLSLDSPQASSSTGP--CKLISARTTLTKNDTTS 172
TS G + S SP+ S + P S++T+L + TS
Sbjct: 120 TSPEIGPRTSPKTSSKTSPKTSPKSSPKTSPKTSSKTSLKTSQKTS 165
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 28.3 bits (60), Expect = 3.7
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 79 KASHRQSSHSKPASQ--PQQDHRSRLTR-FLALRHAPTLPHRAAFKLSLDSPQTSSSTGD 135
+ + R++ S P Q PQ +R R + R + P +A+ K PQ ++
Sbjct: 834 RQASRKTKTSNPQDQDKPQDKQVARQARPRQSSRKSKARPRQASRKTKTSKPQHKQASRP 893
Query: 136 NHAAFKLSLDSPQASSSTGPCKLISARTTLTK 167
HA+ K PQ +R T TK
Sbjct: 894 RHASCKTMASKPQDQDKQSTRPGQKSRKTRTK 925
>SB_18624| Best HMM Match : EGF (HMM E-Value=7.8e-06)
Length = 382
Score = 28.3 bits (60), Expect = 3.7
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 103 TRFLALRHAPTLPHRAAF--KLSLDSPQTSSSTGDNHAAFKLSLDSPQASSST 153
T+ +L + L H F K LD+ ++ DNH ++LSLD Q ST
Sbjct: 204 TKAWSLIESYALKHNLDFQRKSFLDNYPVDETSPDNHEKYRLSLDKMQHLRST 256
>SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09)
Length = 1103
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 82 HRQSSHSKPASQPQQDHRSRLTRFLALRHAPTLP 115
H+++ HS PA P +HR F HAP P
Sbjct: 261 HKKAHHSDPAVPPPIEHRPHHRPFPPAVHAPYHP 294
>SB_53577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 123 SLDSPQTSSSTGDNHAAFKLSLDSPQASSST 153
S DSP + S + D+ +++ SLDSP + SS+
Sbjct: 18 SPDSPSSYSPSPDSPSSYSPSLDSPSSYSSS 48
>SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018)
Length = 3561
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 1 MPESRLRHFQDKAHIYKFRTTTFGPSVYRAISP 33
MPES + HF + H + F+ S + AI P
Sbjct: 1893 MPESGIHHFAETGHKFHFQELQISGSAHVAIWP 1925
>SB_30396| Best HMM Match : M20_dimer (HMM E-Value=4e-08)
Length = 489
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 45 PTTGDLRRNNRNLLIHHQRIKNFGYQNPPAFSQIKASHRQS-----SHSKPASQPQQD 97
P +L NN ++ ++FG + PP Q+K + SH KPA P D
Sbjct: 374 PFYSNLVTNNALAKLYQTHAESFGLKYPPKSEQVKIPFGSTDMGNVSHIKPAIHPYYD 431
>SB_7778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 72 PPAFS---QIKASHRQSSHSKPASQPQQD 97
PP+FS ++ H+ S H KPA P D
Sbjct: 227 PPSFSGKESVRKKHKSSPHKKPAVPPAPD 255
>SB_24569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1660
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 117 RAAFKLSLDSPQTSSSTGDNHAAFKLSL-DSPQASSSTGPCKLISARTTL 165
R F +D P TG A L+ D QA S+ GP I +RTTL
Sbjct: 286 RTIFDWPVDMPWLYYKTGIQDAVDVLNRRDITQAFSANGPLTFIISRTTL 335
>SB_52084| Best HMM Match : Vicilin_N (HMM E-Value=1.7)
Length = 520
Score = 27.1 bits (57), Expect = 8.7
Identities = 37/128 (28%), Positives = 49/128 (38%), Gaps = 18/128 (14%)
Query: 65 KNFGYQNPPAFSQIKASHRQSSHSKPASQPQQDHRSRLTRFLALRHAPTL---PHRAAFK 121
K FG + AF +I A R+SS S+ + HR + L+H T P R K
Sbjct: 53 KVFGTKGT-AFGKIPA-RRRSSGDAELSRKKHSHRMTSSDSEILKHKATAAPKPKRLFKK 110
Query: 122 LSLDSPQTSSS-----TGDNHAAFKLSLDSPQASSSTGPC--------KLISARTTLTKN 168
D P T S+ G + D P + GP KL+ + TK
Sbjct: 111 TRKDGPTTRSAFVKEKVGVFSESSSSGTDWPGLEKTPGPVSALNLIPDKLLPSSHGKTKR 170
Query: 169 DTTSSLGG 176
T SLGG
Sbjct: 171 RTRGSLGG 178
>SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 27.1 bits (57), Expect = 8.7
Identities = 21/98 (21%), Positives = 43/98 (43%)
Query: 76 SQIKASHRQSSHSKPASQPQQDHRSRLTRFLALRHAPTLPHRAAFKLSLDSPQTSSSTGD 135
S +S+ SS S +S S + + + + ++ S S +SSS+
Sbjct: 158 SSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 217
Query: 136 NHAAFKLSLDSPQASSSTGPCKLISARTTLTKNDTTSS 173
N ++ S S +SSS+ S+ ++ + + ++SS
Sbjct: 218 NSSSSSSSSSSSSSSSSSNNSSSSSSSSSSSSSSSSSS 255
>SB_31639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 27.1 bits (57), Expect = 8.7
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 6/110 (5%)
Query: 64 IKNFGYQNPPAFSQIKASHRQSSHSKPASQPQQDHRSRLTRFLALRHAPTLPHRAAFKLS 123
+K + + P A + H+Q K QPQQ + + + + P + A
Sbjct: 2 MKYYPSKIPQACLSTEKKHQQQQQKKQQQQPQQQQQQQQQQQQPQQQQQQQPQQQA---- 57
Query: 124 LDSPQTSSSTGDNHAAFKLSLDSPQASSSTGPCKLISARTTLTKNDTTSS 173
+ T+++T +N PQ P + + TT T T++
Sbjct: 58 --TTTTTTTTSNNSNHNNKQQQQPQQQQQQQPQQQQATTTTATTTTATTT 105
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 27.1 bits (57), Expect = 8.7
Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 73 PAFSQIKASHRQSSHSKPASQPQQDHRSRLTRFLALRHAPTLPHRAAFKLSLD---SPQT 129
P S + H A P H S+ L+ PT H A + S D SP+
Sbjct: 412 PTTSTVDQQHSLRWQYGSAFNPTAPHDSQSHNGLS---NPTKRHSAITEYSTDAMLSPKR 468
Query: 130 SSSTGDNHAAFKLSLDSPQASSSTGPCKLISARTTLTKNDTT 171
+++ N +++ +A TGP + + + T N+ T
Sbjct: 469 PTNSIPNERLYRIKEQYSEAVHQTGPRRPVKSTPTKRHNEGT 510
>SB_7746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 27.1 bits (57), Expect = 8.7
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 2/105 (1%)
Query: 27 VYRAISPARWKIFPLSYIPTTGDLRRNNRNLLIHHQRIKNFGYQNPPAFSQIKASHRQSS 86
V R + +K+F Y T ++RNLL +H + N + + + +
Sbjct: 29 VVRVVENKFFKVFRGMYSYTPRYSSPHDRNLLWYHSAVTNI--VEYKSMGNLFTTILRGR 86
Query: 87 HSKPASQPQQDHRSRLTRFLALRHAPTLPHRAAFKLSLDSPQTSS 131
H + + P S+ +R LA L A LSL P+ S
Sbjct: 87 HFETCAGPSDFRTSKASRALAPGFFRPLRKTTAIDLSLSLPRCFS 131
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.128 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,334,287
Number of Sequences: 59808
Number of extensions: 271890
Number of successful extensions: 835
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 679
Number of HSP's gapped (non-prelim): 143
length of query: 177
length of database: 16,821,457
effective HSP length: 78
effective length of query: 99
effective length of database: 12,156,433
effective search space: 1203486867
effective search space used: 1203486867
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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