Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001134-TA|BGIBMGA001134-PA|undefined
(177 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL358780-2|CAI13978.2| 818|Homo sapiens novel protein (FLJ16611... 31 2.2
AK131456-1|BAD18601.1| 762|Homo sapiens protein ( Homo sapiens ... 31 2.2
AB234866-1|BAE93016.1| 827|Homo sapiens DLN-1 protein. 31 2.2
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 31 2.9
BX322799-1|CAM24776.1| 483|Homo sapiens NADPH oxidase activator... 30 3.8
BC110840-1|AAI10841.1| 476|Homo sapiens NOXA1 protein protein. 30 3.8
BC041594-1|AAH41594.1| 483|Homo sapiens NADPH oxidase activator... 30 3.8
AY255769-1|AAP13480.1| 476|Homo sapiens NADPH oxidase activator... 30 3.8
AB095031-1|BAC76710.1| 476|Homo sapiens p67phox-like factor pro... 30 3.8
Z83844-7|CAI20371.1| 2193|Homo sapiens protein ( Human DNA seque... 30 5.1
DQ278603-1|ABB77204.1| 2266|Homo sapiens trio-associated repeat ... 30 5.1
DQ228005-1|ABB59561.1| 2365|Homo sapiens TRIOBP isoform 6 protein. 30 5.1
DQ228004-1|ABB59560.1| 1144|Homo sapiens TRIOBP isoform 4 protein. 30 5.1
DQ228003-1|ABB59559.1| 2193|Homo sapiens TRIOBP isoform 3 protein. 30 5.1
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 30 5.1
AY927790-1|AAY16126.1| 273|Homo sapiens truncated NADPH oxidase... 30 5.1
AP001751-1|BAA95536.1| 786|Homo sapiens SNF1LK protein. 30 5.1
BC105006-1|AAI05007.1| 312|Homo sapiens PRP38 pre-mRNA processi... 29 6.7
BC105004-1|AAI05005.1| 312|Homo sapiens PRP38 pre-mRNA processi... 29 6.7
BC098434-1|AAH98434.1| 1041|Homo sapiens ZNF318 protein protein. 29 6.7
BC063655-1|AAH63655.1| 125|Homo sapiens PRP38 pre-mRNA processi... 29 6.7
BC030687-1|AAH30687.2| 937|Homo sapiens ZNF318 protein protein. 29 6.7
BC000777-1|AAH00777.2| 125|Homo sapiens PRP38 pre-mRNA processi... 29 6.7
AY861434-1|AAX56124.1| 1329|Homo sapiens protocadherin 11X isofo... 29 6.7
AY861433-1|AAX56123.1| 1310|Homo sapiens protocadherin 11X isofo... 29 6.7
AY861432-1|AAX56122.1| 1339|Homo sapiens protocadherin 11X isofo... 29 6.7
AL590383-2|CAH71374.1| 2099|Homo sapiens zinc finger protein 318... 29 6.7
AL583834-1|CAI14459.1| 2099|Homo sapiens zinc finger protein 318... 29 6.7
AL513218-9|CAI12289.1| 312|Homo sapiens PRP38 pre-mRNA processi... 29 6.7
AL133321-2|CAI41436.1| 1337|Homo sapiens protocadherin 11 X-link... 29 6.7
AL133321-1|CAI41435.1| 1347|Homo sapiens protocadherin 11 X-link... 29 6.7
AL133274-3|CAI41629.1| 1310|Homo sapiens protocadherin 11 X-link... 29 6.7
AL133274-2|CAI41631.1| 1337|Homo sapiens protocadherin 11 X-link... 29 6.7
AL133274-1|CAI41630.1| 1347|Homo sapiens protocadherin 11 X-link... 29 6.7
AL121869-5|CAI41414.1| 1337|Homo sapiens protocadherin 11 X-link... 29 6.7
AL121869-4|CAI41413.1| 1347|Homo sapiens protocadherin 11 X-link... 29 6.7
AL121869-3|CAI41412.1| 1310|Homo sapiens protocadherin 11 X-link... 29 6.7
AK092038-1|BAC03796.1| 312|Homo sapiens protein ( Homo sapiens ... 29 6.7
AK027842-1|BAB55405.1| 236|Homo sapiens protein ( Homo sapiens ... 29 6.7
AJ564945-1|CAD92424.1| 224|Homo sapiens protocadherin protein. 29 6.7
AF332219-1|AAK13471.1| 1337|Homo sapiens protocadherin 11 protein. 29 6.7
AF332218-1|AAK13470.1| 1347|Homo sapiens protocadherin 11 protein. 29 6.7
AF217288-1|AAK82656.1| 1310|Homo sapiens protocadherin-S protein. 29 6.7
AF206516-1|AAK82655.1| 1347|Homo sapiens protocadherin-S protein. 29 6.7
AF121141-1|AAD17298.1| 2099|Homo sapiens endocrine regulator pro... 29 6.7
AF090114-1|AAD47387.1| 2099|Homo sapiens unknown protein. 29 6.7
AB037747-1|BAA92564.1| 424|Homo sapiens KIAA1326 protein protein. 29 6.7
CR457297-1|CAG33578.1| 383|Homo sapiens SAV1 protein. 29 8.9
BC020537-1|AAH20537.1| 383|Homo sapiens salvador homolog 1 (Dro... 29 8.9
AK023071-1|BAB14390.1| 383|Homo sapiens protein ( Homo sapiens ... 29 8.9
AK021500-1|BAB13835.1| 383|Homo sapiens protein ( Homo sapiens ... 29 8.9
AJ292969-1|CAC13972.1| 383|Homo sapiens WW45 protein protein. 29 8.9
>AL358780-2|CAI13978.2| 818|Homo sapiens novel protein (FLJ16611)
protein.
Length = 818
Score = 31.1 bits (67), Expect = 2.2
Identities = 27/81 (33%), Positives = 29/81 (35%), Gaps = 8/81 (9%)
Query: 72 PPAFSQIKASHRQSSHSKPASQPQQDHRSRLTRFLALRHAPTLPHRAAFKLSLDSPQTSS 131
PP H H A PQQ H H P PH +F S S SS
Sbjct: 244 PPPHHHHHHHHHHHHHHHRAQPPQQSHHP------PHHHRPQ-PHLGSFPESCSSDSESS 296
Query: 132 STGDNHAAFKLSLDSPQASSS 152
S D HAA S +SSS
Sbjct: 297 SYSD-HAANDSDFGSSLSSSS 316
>AK131456-1|BAD18601.1| 762|Homo sapiens protein ( Homo sapiens
cDNA FLJ16611 fis, clone TESTI4011829. ).
Length = 762
Score = 31.1 bits (67), Expect = 2.2
Identities = 27/81 (33%), Positives = 29/81 (35%), Gaps = 8/81 (9%)
Query: 72 PPAFSQIKASHRQSSHSKPASQPQQDHRSRLTRFLALRHAPTLPHRAAFKLSLDSPQTSS 131
PP H H A PQQ H H P PH +F S S SS
Sbjct: 244 PPPHHHHHHHHHHHHHHHRAQPPQQSHHP------PHHHRPQ-PHLGSFPESCSSDSESS 296
Query: 132 STGDNHAAFKLSLDSPQASSS 152
S D HAA S +SSS
Sbjct: 297 SYSD-HAANDSDFGSSLSSSS 316
>AB234866-1|BAE93016.1| 827|Homo sapiens DLN-1 protein.
Length = 827
Score = 31.1 bits (67), Expect = 2.2
Identities = 27/81 (33%), Positives = 29/81 (35%), Gaps = 8/81 (9%)
Query: 72 PPAFSQIKASHRQSSHSKPASQPQQDHRSRLTRFLALRHAPTLPHRAAFKLSLDSPQTSS 131
PP H H A PQQ H H P PH +F S S SS
Sbjct: 253 PPPHHHHHHHHHHHHHHHRAQPPQQSHHP------PHHHRPQ-PHLGSFPESCSSDSESS 305
Query: 132 STGDNHAAFKLSLDSPQASSS 152
S D HAA S +SSS
Sbjct: 306 SYSD-HAANDSDFGSSLSSSS 325
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 30.7 bits (66), Expect = 2.9
Identities = 21/88 (23%), Positives = 39/88 (44%)
Query: 86 SHSKPASQPQQDHRSRLTRFLALRHAPTLPHRAAFKLSLDSPQTSSSTGDNHAAFKLSLD 145
S S +S P H S +P+ + S S +SSS ++++ S
Sbjct: 57 SSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSS 116
Query: 146 SPQASSSTGPCKLISARTTLTKNDTTSS 173
SP +SSS+ S+ ++ + + ++SS
Sbjct: 117 SPSSSSSSSSSSPSSSSSSPSSSSSSSS 144
Score = 29.1 bits (62), Expect = 8.9
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 76 SQIKASHRQSSHSKPASQPQQDHRSRLTRFLALRHAPTLPHRAAFKLSLDSPQTSSSTGD 135
S +S SSHS +S P H S + +P+ ++ S S +SSS+
Sbjct: 58 SSSSSSSPSSSHS--SSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSS 115
Query: 136 NHAAFKLSLDSPQASSSTGPCKLISARTTLTKNDTTSS 173
+ + S S SSS+ S+ ++ + + ++SS
Sbjct: 116 SSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSS 153
Score = 29.1 bits (62), Expect = 8.9
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 76 SQIKASHRQSSHSKPASQPQQDHRSRLTRFLALRHAPTLPHRAAFKLSLDSPQTSSSTGD 135
S +S SS S P+S S + + + + P ++ S S SSS+
Sbjct: 115 SSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPS 174
Query: 136 NHAAFKLSLDSPQASSSTGPCKLISARTTLTKNDTTSS 173
+ + S +S +SSS+ P S+ + + + ++SS
Sbjct: 175 SSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSS 212
>BX322799-1|CAM24776.1| 483|Homo sapiens NADPH oxidase activator 1
protein.
Length = 483
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 127 PQTSSSTGDNHAAFKLSLDSPQASSSTGPCKLISARTTLTKNDTTSS 173
PQ G NH A L +DSP+A + GP + A T + + TS+
Sbjct: 220 PQQPQGPGANHDARSLIMDSPRAGTHQGP---LDAETEVGADRCTST 263
>BC110840-1|AAI10841.1| 476|Homo sapiens NOXA1 protein protein.
Length = 476
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 127 PQTSSSTGDNHAAFKLSLDSPQASSSTGPCKLISARTTLTKNDTTSS 173
PQ G NH A L +DSP+A + GP + A T + + TS+
Sbjct: 220 PQQPQGPGANHDARSLIMDSPRAGTHQGP---LDAETEVGADRCTST 263
>BC041594-1|AAH41594.1| 483|Homo sapiens NADPH oxidase activator 1
protein.
Length = 483
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 127 PQTSSSTGDNHAAFKLSLDSPQASSSTGPCKLISARTTLTKNDTTSS 173
PQ G NH A L +DSP+A + GP + A T + + TS+
Sbjct: 220 PQQPQGPGANHDARSLIMDSPRAGTHQGP---LDAETEVGADRCTST 263
>AY255769-1|AAP13480.1| 476|Homo sapiens NADPH oxidase activator 1
protein.
Length = 476
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 127 PQTSSSTGDNHAAFKLSLDSPQASSSTGPCKLISARTTLTKNDTTSS 173
PQ G NH A L +DSP+A + GP + A T + + TS+
Sbjct: 220 PQQPQGPGANHDARSLIMDSPRAGTHQGP---LDAETEVGADRCTST 263
>AB095031-1|BAC76710.1| 476|Homo sapiens p67phox-like factor
protein.
Length = 476
Score = 30.3 bits (65), Expect = 3.8
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 127 PQTSSSTGDNHAAFKLSLDSPQASSSTGPCKLISARTTLTKNDTTSS 173
PQ G NH A L +DSP+A + GP + A T + + TS+
Sbjct: 220 PQQPQGPGANHDARSLIMDSPRAGTHQGP---LDAETEVGADRCTST 263
>Z83844-7|CAI20371.1| 2193|Homo sapiens protein ( Human DNA sequence
from clone RP1-37E16 on chromosome 22. ).
Length = 2193
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 125 DSPQTSSSTGDNHAAFKLSLDSPQASSSTGPCKLISARTTLTKND 169
D+P+ SS+ D A ++P+ASS + +L + RT+ T+ D
Sbjct: 146 DTPRASSTQEDTPRASSTQWNTPRASSPSRSTQLDNPRTSSTQQD 190
>DQ278603-1|ABB77204.1| 2266|Homo sapiens trio-associated repeat on
actin protein.
Length = 2266
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 125 DSPQTSSSTGDNHAAFKLSLDSPQASSSTGPCKLISARTTLTKND 169
D+P+ SS+ D A ++P+ASS + +L + RT+ T+ D
Sbjct: 318 DTPRASSTQEDTPRASSTQWNTPRASSPSRSTQLDNPRTSSTQQD 362
>DQ228005-1|ABB59561.1| 2365|Homo sapiens TRIOBP isoform 6 protein.
Length = 2365
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 125 DSPQTSSSTGDNHAAFKLSLDSPQASSSTGPCKLISARTTLTKND 169
D+P+ SS+ D A ++P+ASS + +L + RT+ T+ D
Sbjct: 318 DTPRASSTQEDTPRASSTQWNTPRASSPSRSTQLDNPRTSSTQQD 362
>DQ228004-1|ABB59560.1| 1144|Homo sapiens TRIOBP isoform 4 protein.
Length = 1144
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 125 DSPQTSSSTGDNHAAFKLSLDSPQASSSTGPCKLISARTTLTKND 169
D+P+ SS+ D A ++P+ASS + +L + RT+ T+ D
Sbjct: 146 DTPRASSTQEDTPRASSTQWNTPRASSPSRSTQLDNPRTSSTQQD 190
>DQ228003-1|ABB59559.1| 2193|Homo sapiens TRIOBP isoform 3 protein.
Length = 2193
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 125 DSPQTSSSTGDNHAAFKLSLDSPQASSSTGPCKLISARTTLTKND 169
D+P+ SS+ D A ++P+ASS + +L + RT+ T+ D
Sbjct: 146 DTPRASSTQEDTPRASSTQWNTPRASSPSRSTQLDNPRTSSTQQD 190
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 29.9 bits (64), Expect = 5.1
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 76 SQIKASHRQSSHSKPASQPQQDHRSRLTRFLALRHAPTLPHRAAFKLSLDSPQTSSSTGD 135
S +S SSHS +S P H S + +P+ ++ S +SSS+
Sbjct: 58 SSSSSSSPSSSHS--SSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSS 115
Query: 136 NHAAFKLSLDSPQASSSTGPCKLISARTTLTKNDTTS 172
+ ++ S S +SSS+ P S+ ++ + ++S
Sbjct: 116 SPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSS 152
Score = 29.1 bits (62), Expect = 8.9
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 76 SQIKASHRQSSHSKPASQPQQDHRSRLTRFLALRHAPTLPHRAAFKLSLDSPQTSSSTGD 135
S +S SS S P+S S + + + + P ++ S S SSS+
Sbjct: 114 SSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPS 173
Query: 136 NHAAFKLSLDSPQASSSTGPCKLISARTTLTKNDTTSS 173
+ + S +S +SSS+ P S+ + + + ++SS
Sbjct: 174 SSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSS 211
>AY927790-1|AAY16126.1| 273|Homo sapiens truncated NADPH oxidase
activator 1 protein.
Length = 273
Score = 29.9 bits (64), Expect = 5.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 127 PQTSSSTGDNHAAFKLSLDSPQASSSTGP 155
PQ G NH A L +DSP+A + GP
Sbjct: 220 PQQPQGPGANHDARSLIMDSPRAGTHQGP 248
>AP001751-1|BAA95536.1| 786|Homo sapiens SNF1LK protein.
Length = 786
Score = 29.9 bits (64), Expect = 5.1
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 131 SSTGDNHAAFKLSLDSPQASSSTGPCKLISARTTLTKNDTTSS 173
SSTG H ++S + S T PCK +S TT + + TSS
Sbjct: 469 SSTGRRHTLAEVST---RLSPLTAPCKFVSPSTTASPAEGTSS 508
>BC105006-1|AAI05007.1| 312|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A, isoform 2
protein.
Length = 312
Score = 29.5 bits (63), Expect = 6.7
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 2 PESRLRHFQDKAHIYKFRTTTFGPSVYRAISPARWKIFPLSYIPTTGDLRRNNRNLLIHH 61
P+ R R ++D + T + S R+ SP R P P+ R +++ H
Sbjct: 210 PDHRRRSYRDLDKPRRSPTLRYRRS--RSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHR 267
Query: 62 QRIKNFGYQNPPAFSQIKASHRQSSHSKPASQPQQDHR 99
R ++ +++ SHR SHSK + ++ H+
Sbjct: 268 SRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHK 305
>BC105004-1|AAI05005.1| 312|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 312
Score = 29.5 bits (63), Expect = 6.7
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 2 PESRLRHFQDKAHIYKFRTTTFGPSVYRAISPARWKIFPLSYIPTTGDLRRNNRNLLIHH 61
P+ R R ++D + T + S R+ SP R P P+ R +++ H
Sbjct: 210 PDHRRRSYRDLDKPRRSPTLRYRRS--RSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHR 267
Query: 62 QRIKNFGYQNPPAFSQIKASHRQSSHSKPASQPQQDHR 99
R ++ +++ SHR SHSK + ++ H+
Sbjct: 268 SRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHK 305
>BC098434-1|AAH98434.1| 1041|Homo sapiens ZNF318 protein protein.
Length = 1041
Score = 29.5 bits (63), Expect = 6.7
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 61 HQRIKNFGYQNPPA-FSQIKASHRQSSHSK-PASQPQQDHRSRLTRFLALRHAPTLPHR 117
H +K G A SQ+ A ++ H K P+ + D RS + R+ + H ++ HR
Sbjct: 413 HDLLKTIGLDIGVAEISQLAARTQERLHGKKPSLRSSADRRSSVDRYFSADHCSSVDHR 471
>BC063655-1|AAH63655.1| 125|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 125
Score = 29.5 bits (63), Expect = 6.7
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 2 PESRLRHFQDKAHIYKFRTTTFGPSVYRAISPARWKIFPLSYIPTTGDLRRNNRNLLIHH 61
P+ R R ++D + T + S R+ SP R P P+ R +++ H
Sbjct: 23 PDHRRRSYRDLDKPRRSPTLRYRRS--RSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHR 80
Query: 62 QRIKNFGYQNPPAFSQIKASHRQSSHSKPASQPQQDHR 99
R ++ +++ SHR SHSK + ++ H+
Sbjct: 81 SRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHK 118
>BC030687-1|AAH30687.2| 937|Homo sapiens ZNF318 protein protein.
Length = 937
Score = 29.5 bits (63), Expect = 6.7
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 61 HQRIKNFGYQNPPA-FSQIKASHRQSSHSK-PASQPQQDHRSRLTRFLALRHAPTLPHR 117
H +K G A SQ+ A ++ H K P+ + D RS + R+ + H ++ HR
Sbjct: 413 HDLLKTIGLDIGVAEISQLAARTQERLHGKKPSLRSSADRRSSVDRYFSADHCSSVDHR 471
>BC000777-1|AAH00777.2| 125|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 125
Score = 29.5 bits (63), Expect = 6.7
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 2 PESRLRHFQDKAHIYKFRTTTFGPSVYRAISPARWKIFPLSYIPTTGDLRRNNRNLLIHH 61
P+ R R ++D + T + S R+ SP R P P+ R +++ H
Sbjct: 23 PDHRRRSYRDLDKPRRSPTLRYRRS--RSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHR 80
Query: 62 QRIKNFGYQNPPAFSQIKASHRQSSHSKPASQPQQDHR 99
R ++ +++ SHR SHSK + ++ H+
Sbjct: 81 SRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHK 118
>AY861434-1|AAX56124.1| 1329|Homo sapiens protocadherin 11X isoform 6
protein.
Length = 1329
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 72 PPAFSQIKASHRQSS---HSKPASQPQQDHRS-RLTRFLALRHAPTLPHRAA 119
P + +S Q+S HS P SQ H S R+T+ +AL H+P + A
Sbjct: 1137 PASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIA 1188
>AY861433-1|AAX56123.1| 1310|Homo sapiens protocadherin 11X isoform 7
protein.
Length = 1310
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 72 PPAFSQIKASHRQSS---HSKPASQPQQDHRS-RLTRFLALRHAPTLPHRAA 119
P + +S Q+S HS P SQ H S R+T+ +AL H+P + A
Sbjct: 1118 PASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIA 1169
>AY861432-1|AAX56122.1| 1339|Homo sapiens protocadherin 11X isoform 8
protein.
Length = 1339
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 72 PPAFSQIKASHRQSS---HSKPASQPQQDHRS-RLTRFLALRHAPTLPHRAA 119
P + +S Q+S HS P SQ H S R+T+ +AL H+P + A
Sbjct: 1147 PASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIA 1198
>AL590383-2|CAH71374.1| 2099|Homo sapiens zinc finger protein 318
protein.
Length = 2099
Score = 29.5 bits (63), Expect = 6.7
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 61 HQRIKNFGYQNPPA-FSQIKASHRQSSHSK-PASQPQQDHRSRLTRFLALRHAPTLPHR 117
H +K G A SQ+ A ++ H K P+ + D RS + R+ + H ++ HR
Sbjct: 413 HDLLKTIGLDIGVAEISQLAARTQERLHGKKPSLRSSADRRSSVDRYFSADHCSSVDHR 471
>AL583834-1|CAI14459.1| 2099|Homo sapiens zinc finger protein 318
protein.
Length = 2099
Score = 29.5 bits (63), Expect = 6.7
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 61 HQRIKNFGYQNPPA-FSQIKASHRQSSHSK-PASQPQQDHRSRLTRFLALRHAPTLPHR 117
H +K G A SQ+ A ++ H K P+ + D RS + R+ + H ++ HR
Sbjct: 413 HDLLKTIGLDIGVAEISQLAARTQERLHGKKPSLRSSADRRSSVDRYFSADHCSSVDHR 471
>AL513218-9|CAI12289.1| 312|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 312
Score = 29.5 bits (63), Expect = 6.7
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 2 PESRLRHFQDKAHIYKFRTTTFGPSVYRAISPARWKIFPLSYIPTTGDLRRNNRNLLIHH 61
P+ R R ++D + T + S R+ SP R P P+ R +++ H
Sbjct: 210 PDHRRRSYRDLDKPRRSPTLRYRRS--RSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHR 267
Query: 62 QRIKNFGYQNPPAFSQIKASHRQSSHSKPASQPQQDHR 99
R ++ +++ SHR SHSK + ++ H+
Sbjct: 268 SRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHK 305
>AL133321-2|CAI41436.1| 1337|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1337
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 72 PPAFSQIKASHRQSS---HSKPASQPQQDHRS-RLTRFLALRHAPTLPHRAA 119
P + +S Q+S HS P SQ H S R+T+ +AL H+P + A
Sbjct: 1145 PASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIA 1196
>AL133321-1|CAI41435.1| 1347|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1347
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 72 PPAFSQIKASHRQSS---HSKPASQPQQDHRS-RLTRFLALRHAPTLPHRAA 119
P + +S Q+S HS P SQ H S R+T+ +AL H+P + A
Sbjct: 1155 PASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIA 1206
>AL133274-3|CAI41629.1| 1310|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1310
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 72 PPAFSQIKASHRQSS---HSKPASQPQQDHRS-RLTRFLALRHAPTLPHRAA 119
P + +S Q+S HS P SQ H S R+T+ +AL H+P + A
Sbjct: 1118 PASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIA 1169
>AL133274-2|CAI41631.1| 1337|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1337
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 72 PPAFSQIKASHRQSS---HSKPASQPQQDHRS-RLTRFLALRHAPTLPHRAA 119
P + +S Q+S HS P SQ H S R+T+ +AL H+P + A
Sbjct: 1145 PASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIA 1196
>AL133274-1|CAI41630.1| 1347|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1347
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 72 PPAFSQIKASHRQSS---HSKPASQPQQDHRS-RLTRFLALRHAPTLPHRAA 119
P + +S Q+S HS P SQ H S R+T+ +AL H+P + A
Sbjct: 1155 PASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIA 1206
>AL121869-5|CAI41414.1| 1337|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1337
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 72 PPAFSQIKASHRQSS---HSKPASQPQQDHRS-RLTRFLALRHAPTLPHRAA 119
P + +S Q+S HS P SQ H S R+T+ +AL H+P + A
Sbjct: 1145 PASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIA 1196
>AL121869-4|CAI41413.1| 1347|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1347
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 72 PPAFSQIKASHRQSS---HSKPASQPQQDHRS-RLTRFLALRHAPTLPHRAA 119
P + +S Q+S HS P SQ H S R+T+ +AL H+P + A
Sbjct: 1155 PASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIA 1206
>AL121869-3|CAI41412.1| 1310|Homo sapiens protocadherin 11 X-linked
protein.
Length = 1310
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 72 PPAFSQIKASHRQSS---HSKPASQPQQDHRS-RLTRFLALRHAPTLPHRAA 119
P + +S Q+S HS P SQ H S R+T+ +AL H+P + A
Sbjct: 1118 PASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIA 1169
>AK092038-1|BAC03796.1| 312|Homo sapiens protein ( Homo sapiens
cDNA FLJ34719 fis, clone MESAN2005689, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 312
Score = 29.5 bits (63), Expect = 6.7
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 2 PESRLRHFQDKAHIYKFRTTTFGPSVYRAISPARWKIFPLSYIPTTGDLRRNNRNLLIHH 61
P+ R R ++D + T + S R+ SP R P P+ R +++ H
Sbjct: 210 PDHRRRSYRDLDKPRRSPTLRYRRS--RSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHR 267
Query: 62 QRIKNFGYQNPPAFSQIKASHRQSSHSKPASQPQQDHR 99
R ++ +++ SHR SHSK + ++ H+
Sbjct: 268 SRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHK 305
>AK027842-1|BAB55405.1| 236|Homo sapiens protein ( Homo sapiens
cDNA FLJ14936 fis, clone PLACE1010194, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 236
Score = 29.5 bits (63), Expect = 6.7
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 2 PESRLRHFQDKAHIYKFRTTTFGPSVYRAISPARWKIFPLSYIPTTGDLRRNNRNLLIHH 61
P+ R R ++D + T + S R+ SP R P P+ R +++ H
Sbjct: 134 PDHRRRSYRDLDKPRRSPTLRYRRS--RSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHR 191
Query: 62 QRIKNFGYQNPPAFSQIKASHRQSSHSKPASQPQQDHR 99
R ++ +++ SHR SHSK + ++ H+
Sbjct: 192 SRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHK 229
>AJ564945-1|CAD92424.1| 224|Homo sapiens protocadherin protein.
Length = 224
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 72 PPAFSQIKASHRQSS---HSKPASQPQQDHRS-RLTRFLALRHAPTLPHRAA 119
P + +S Q+S HS P SQ H S R+T+ +AL H+P + A
Sbjct: 32 PASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIA 83
>AF332219-1|AAK13471.1| 1337|Homo sapiens protocadherin 11 protein.
Length = 1337
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 72 PPAFSQIKASHRQSS---HSKPASQPQQDHRS-RLTRFLALRHAPTLPHRAA 119
P + +S Q+S HS P SQ H S R+T+ +AL H+P + A
Sbjct: 1145 PASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIA 1196
>AF332218-1|AAK13470.1| 1347|Homo sapiens protocadherin 11 protein.
Length = 1347
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 72 PPAFSQIKASHRQSS---HSKPASQPQQDHRS-RLTRFLALRHAPTLPHRAA 119
P + +S Q+S HS P SQ H S R+T+ +AL H+P + A
Sbjct: 1155 PASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIA 1206
>AF217288-1|AAK82656.1| 1310|Homo sapiens protocadherin-S protein.
Length = 1310
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 72 PPAFSQIKASHRQSS---HSKPASQPQQDHRS-RLTRFLALRHAPTLPHRAA 119
P + +S Q+S HS P SQ H S R+T+ +AL H+P + A
Sbjct: 1118 PASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIA 1169
>AF206516-1|AAK82655.1| 1347|Homo sapiens protocadherin-S protein.
Length = 1347
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 72 PPAFSQIKASHRQSS---HSKPASQPQQDHRS-RLTRFLALRHAPTLPHRAA 119
P + +S Q+S HS P SQ H S R+T+ +AL H+P + A
Sbjct: 1155 PASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIA 1206
>AF121141-1|AAD17298.1| 2099|Homo sapiens endocrine regulator
protein.
Length = 2099
Score = 29.5 bits (63), Expect = 6.7
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 61 HQRIKNFGYQNPPA-FSQIKASHRQSSHSK-PASQPQQDHRSRLTRFLALRHAPTLPHR 117
H +K G A SQ+ A ++ H K P+ + D RS + R+ + H ++ HR
Sbjct: 413 HDLLKTIGLDIGVAEISQLAARTQERLHGKKPSLRSSADRRSSVDRYFSADHCSSVDHR 471
>AF090114-1|AAD47387.1| 2099|Homo sapiens unknown protein.
Length = 2099
Score = 29.5 bits (63), Expect = 6.7
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 61 HQRIKNFGYQNPPA-FSQIKASHRQSSHSK-PASQPQQDHRSRLTRFLALRHAPTLPHR 117
H +K G A SQ+ A ++ H K P+ + D RS + R+ + H ++ HR
Sbjct: 413 HDLLKTIGLDIGVAEISQLAARTQERLHGKKPSLRSSADRRSSVDRYFSADHCSSVDHR 471
>AB037747-1|BAA92564.1| 424|Homo sapiens KIAA1326 protein protein.
Length = 424
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 72 PPAFSQIKASHRQSS---HSKPASQPQQDHRS-RLTRFLALRHAPTLPHRAA 119
P + +S Q+S HS P SQ H S R+T+ +AL H+P + A
Sbjct: 232 PASLDHSSSSQAQASALCHSPPLSQASTQHHSPRVTQTIALCHSPPVTQTIA 283
>CR457297-1|CAG33578.1| 383|Homo sapiens SAV1 protein.
Length = 383
Score = 29.1 bits (62), Expect = 8.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 108 LRHAPTLPHRAAFKLSLDSPQTSSSTGD 135
+RH PT+P R L SP S++GD
Sbjct: 38 IRHGPTIPRRTDICLPDSSPNAFSTSGD 65
>BC020537-1|AAH20537.1| 383|Homo sapiens salvador homolog 1
(Drosophila) protein.
Length = 383
Score = 29.1 bits (62), Expect = 8.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 108 LRHAPTLPHRAAFKLSLDSPQTSSSTGD 135
+RH PT+P R L SP S++GD
Sbjct: 38 IRHGPTIPRRTDICLPDSSPNAFSTSGD 65
>AK023071-1|BAB14390.1| 383|Homo sapiens protein ( Homo sapiens
cDNA FLJ13009 fis, clone NT2RP3000487. ).
Length = 383
Score = 29.1 bits (62), Expect = 8.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 108 LRHAPTLPHRAAFKLSLDSPQTSSSTGD 135
+RH PT+P R L SP S++GD
Sbjct: 38 IRHGPTIPRRTDICLPDSSPNAFSTSGD 65
>AK021500-1|BAB13835.1| 383|Homo sapiens protein ( Homo sapiens
cDNA FLJ11438 fis, clone HEMBA1001247. ).
Length = 383
Score = 29.1 bits (62), Expect = 8.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 108 LRHAPTLPHRAAFKLSLDSPQTSSSTGD 135
+RH PT+P R L SP S++GD
Sbjct: 38 IRHGPTIPRRTDICLPDSSPNAFSTSGD 65
>AJ292969-1|CAC13972.1| 383|Homo sapiens WW45 protein protein.
Length = 383
Score = 29.1 bits (62), Expect = 8.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 108 LRHAPTLPHRAAFKLSLDSPQTSSSTGD 135
+RH PT+P R L SP S++GD
Sbjct: 38 IRHGPTIPRRTDICLPDSSPNAFSTSGD 65
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.317 0.128 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,064,263
Number of Sequences: 224733
Number of extensions: 1087401
Number of successful extensions: 3068
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 2991
Number of HSP's gapped (non-prelim): 99
length of query: 177
length of database: 73,234,838
effective HSP length: 85
effective length of query: 92
effective length of database: 54,132,533
effective search space: 4980193036
effective search space used: 4980193036
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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