Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001133-TA|BGIBMGA001133-PA|undefined
         (65 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   1.1  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   1.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          18   7.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    18   7.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       18   9.8  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    18   9.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    18   9.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    18   9.8  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock
          cognate 70 protein.
          Length = 196

 Score = 21.0 bits (42), Expect = 1.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 10 QGYKYIHNADLSPICGIFEDIRTSCQHLR 38
          Q +K  H AD+S        +RT C+  +
Sbjct: 71 QDFKKKHKADISGNPRALRRLRTQCERAK 99


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock
          protein 70 protein.
          Length = 196

 Score = 21.0 bits (42), Expect = 1.1
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 10 QGYKYIHNADLSPICGIFEDIRTSCQHLR 38
          Q +K  H AD+S        +RT C+  +
Sbjct: 71 QDFKKKHKADISGNPRALRRLRTQCERAK 99


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 18.2 bits (35), Expect = 7.4
 Identities = 9/30 (30%), Positives = 12/30 (40%)

Query: 1   MTAKSWRKVQGYKYIHNADLSPICGIFEDI 30
           MT    R + GY  +      P    FED+
Sbjct: 275 MTGPQQRVLSGYHALSGLKAPPGVEHFEDV 304


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 18.2 bits (35), Expect = 7.4
 Identities = 5/14 (35%), Positives = 10/14 (71%)

Query: 2   TAKSWRKVQGYKYI 15
           T ++W K+ GY+ +
Sbjct: 625 TIETWNKLFGYQIL 638


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 17.8 bits (34), Expect = 9.8
 Identities = 6/16 (37%), Positives = 8/16 (50%)

Query: 11  GYKYIHNADLSPICGI 26
           GY   HN     +CG+
Sbjct: 491 GYHGFHNPFTCNMCGV 506


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 17.8 bits (34), Expect = 9.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 27  FEDIRTSCQHLREYNDTTYRA 47
           FED R S  +L     TT++A
Sbjct: 140 FEDERISVMNLITEEITTHQA 160


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 17.8 bits (34), Expect = 9.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 27  FEDIRTSCQHLREYNDTTYRA 47
           FED R S  +L     TT++A
Sbjct: 140 FEDERISVMNLITEEITTHQA 160


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 17.8 bits (34), Expect = 9.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 27  FEDIRTSCQHLREYNDTTYRA 47
           FED R S  +L     TT++A
Sbjct: 140 FEDERISVMNLITEEITTHQA 160


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.326    0.138    0.447 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,389
Number of Sequences: 317
Number of extensions: 521
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 65
length of database: 114,650
effective HSP length: 43
effective length of query: 22
effective length of database: 101,019
effective search space:  2222418
effective search space used:  2222418
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.9 bits)
S2: 34 (17.8 bits)