GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001133-TA|BGIBMGA001133-PA|undefined
         (65 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   0.36 
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    21   4.4  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           21   4.4  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       20   7.7  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 0.36
 Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 4/45 (8%)

Query: 8   KVQGYKYIHNADLS----PICGIFEDIRTSCQHLREYNDTTYRAV 48
           K+ G   + N D S     +  +F+++  + QHL++YN    +A+
Sbjct: 942 KIAGLGALPNVDASYQKMSLKSLFKELEKANQHLKKYNHVNKKAL 986


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)

Query: 41  NDTTYRAVGVR 51
           ND  YRA+G+R
Sbjct: 283 NDQGYRAIGIR 293


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 30  IRTSCQHLREYNDTTYRAVGVRD 52
           +  S   L++ ND  +R  GV+D
Sbjct: 200 LNISSNRLQDVNDLGFREKGVKD 222


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 8  KVQGYKYIHNADLSPICGIFEDIRTSCQHLREYNDTT 44
          K Q    I    L P   I  ++   C+ LR Y DT+
Sbjct: 49 KCQPLSNISEVSLEPGQRIRRELDPCCEILRLYCDTS 85


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.326    0.138    0.447 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,370
Number of Sequences: 2123
Number of extensions: 2518
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 65
length of database: 516,269
effective HSP length: 43
effective length of query: 22
effective length of database: 424,980
effective search space:  9349560
effective search space used:  9349560
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 40 (20.2 bits)