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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001132-TA|BGIBMGA001132-PA|IPR000910|HMG1/2 (high
mobility group) box, IPR000135|High mobility group box HMG1 and HMG2,
IPR009071|High mobility group box
         (297 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g28730.1 68416.m03587 structure-specific recognition protein ...    72   4e-13
At1g20693.1 68414.m02592 high mobility group protein beta1 (HMGb...    70   2e-12
At3g51880.2 68416.m05690 high mobility group protein alpha (HMGa...    65   5e-11
At3g51880.1 68416.m05689 high mobility group protein alpha (HMGa...    65   5e-11
At2g17560.1 68415.m02032 high mobility group protein gamma (HMGg...    65   5e-11
At4g11080.1 68417.m01800 high mobility group (HMG1/2) family pro...    62   3e-10
At4g35570.1 68417.m05054 high mobility group protein delta (HMGd...    60   1e-09
At1g20696.1 68414.m02593 high mobility group protein beta2 (HMGb...    60   1e-09
At4g23800.1 68417.m03422 high mobility group (HMG1/2) family pro...    58   9e-09
At2g34450.1 68415.m04227 high mobility group (HMG1/2) family pro...    53   3e-07
At1g76110.1 68414.m08838 high mobility group (HMG1/2) family pro...    50   2e-06
At5g23420.1 68418.m02747 high mobility group (HMG1/2) family pro...    48   6e-06
At1g04880.1 68414.m00485 high mobility group (HMG1/2) family pro...    46   3e-05
At3g13350.1 68416.m01680 high mobility group (HMG1/2) family pro...    39   0.005
At1g55650.1 68414.m06370 high mobility group (HMG1/2) family pro...    35   0.057
At1g69180.1 68414.m07917 transcription factor CRC (CRABS CLAW) i...    32   0.53 
At4g00180.1 68417.m00019 axial regulator YABBY3 (YABBY3) identic...    31   1.2  
At4g00170.1 68417.m00018 vesicle-associated membrane family prot...    31   1.2  
At2g45190.1 68415.m05627 axial regulator YABBY1 (YABBY1) / abnor...    31   1.2  
At2g36270.1 68415.m04452 bZIP transcription factor family protei...    30   2.1  
At1g56660.1 68414.m06516 expressed protein                             30   2.1  
At1g58225.1 68414.m06614 expressed protein                             29   2.8  
At2g38800.1 68415.m04764 calmodulin-binding protein-related cont...    29   3.7  
At3g53490.1 68416.m05905 expressed protein ADAM 13, Xenopus laev...    29   4.9  
At2g26580.2 68415.m03189 plant-specific transcription factor YAB...    28   6.5  
At2g26580.1 68415.m03188 plant-specific transcription factor YAB...    28   6.5  
At5g23405.2 68418.m02742 high mobility group (HMG1/2) family pro...    28   8.6  
At5g23405.1 68418.m02741 high mobility group (HMG1/2) family pro...    28   8.6  
At4g12460.1 68417.m01971 oxysterol-binding family protein simila...    28   8.6  
At3g21640.1 68416.m02729 FKBP-type peptidyl-prolyl cis-trans iso...    28   8.6  
At2g17970.1 68415.m02084 oxidoreductase, 2OG-Fe(II) oxygenase fa...    28   8.6  
At1g78810.2 68414.m09186 expressed protein                             28   8.6  
At1g78810.1 68414.m09185 expressed protein                             28   8.6  
At1g23420.1 68414.m02934 inner no outer protein (INO) identical ...    28   8.6  

>At3g28730.1 68416.m03587 structure-specific recognition protein 1 /
           high mobility group protein / HMG protein nearly
           identical to SP|Q05153 Structure-specific recognition
           protein 1 homolog (HMG protein) {Arabidopsis thaliana};
           contains Pfam profile PF00505: HMG (high mobility group)
           box; contains Pfam profile PF03531: Structure-specific
           recognition protein
          Length = 646

 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 31/80 (38%), Positives = 47/80 (58%)

Query: 187 RKRQQMKDPNAPKRSLSAFFLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAK 246
           +K ++ KDPNAPKR++S F  F   ER  +K  +P    G++ K LG +W     + K  
Sbjct: 551 KKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDKEP 610

Query: 247 YDALSEKDKARYDREMTAYK 266
           Y+A ++ DK RY  E++ YK
Sbjct: 611 YEAKAQVDKQRYKDEISDYK 630



 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 3/92 (3%)

Query: 94  NKARMPRSRPY-NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSE 152
           +K + P+ +   N P+  M+ + FF Q  R+  KK++P ++  F    K   ++W  MS 
Sbjct: 548 SKRKKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIA--FGEVGKVLGDKWRQMSA 605

Query: 153 KEKQRFHEMAEQDKHRFDLEMQNYVPPKDMKV 184
            +K+ +   A+ DK R+  E+ +Y  P+ M V
Sbjct: 606 DDKEPYEAKAQVDKQRYKDEISDYKNPQPMNV 637


>At1g20693.1 68414.m02592 high mobility group protein beta1
           (HMGbeta1) / HMG protein beta1 nearly identical to HMG
           protein (HMGbeta1) [Arabidopsis thaliana] GI:2832359
          Length = 144

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 1/92 (1%)

Query: 177 VPPKDMKVRGRKRQQMKDPNAPKRSLSAFFLFCNDERSKVKAGNPE-YTMGDIAKELGRR 235
           V  K  K  GR +   KDPN PKR  SAFF+F  D R   K  NP+  ++  + K  G +
Sbjct: 17  VTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDK 76

Query: 236 WAAADPETKAKYDALSEKDKARYDREMTAYKK 267
           W +     KA Y A +EK K  Y++ + AY K
Sbjct: 77  WKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNK 108



 Score = 41.1 bits (92), Expect = 9e-04
 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 105 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQ 164
           NKP+   +A+  F++  RE  KK+ P    + A   K   ++W ++S+ EK  +   AE+
Sbjct: 36  NKPKRPASAFFVFMEDFRETFKKENPKNKSV-ATVGKAAGDKWKSLSDSEKAPYVAKAEK 94

Query: 165 DKHRFDLEMQNY 176
            K  ++  ++ Y
Sbjct: 95  RKVEYEKNIKAY 106


>At3g51880.2 68416.m05690 high mobility group protein alpha
           (HMGalpha) / HMG protein alpha nearly identical to HMG
           protein (HMGalpha) [Arabidopsis thaliana] GI:2832357;
           contains Pfam profile PF00505: HMG (high mobility group)
           box
          Length = 185

 Score = 65.3 bits (152), Expect = 5e-11
 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 1/82 (1%)

Query: 187 RKRQQMKDPNAPKRSLSAFFLFCNDERSKVKAGNPEY-TMGDIAKELGRRWAAADPETKA 245
           ++++  KDPN PKR+ SAFF+F  D R   K  NP    +  + K  G++W +     KA
Sbjct: 42  KEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKA 101

Query: 246 KYDALSEKDKARYDREMTAYKK 267
            Y+  + K KA Y+++M AY K
Sbjct: 102 PYEEKAAKRKAEYEKQMDAYNK 123



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 105 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQ 164
           NKP+   +A+  F++  R   KK+ P+V  + +A  K   ++W +MS+ EK  + E A +
Sbjct: 51  NKPKRAPSAFFVFLEDFRVTFKKENPNVKAV-SAVGKAGGQKWKSMSQAEKAPYEEKAAK 109

Query: 165 DKHRFDLEMQNY 176
            K  ++ +M  Y
Sbjct: 110 RKAEYEKQMDAY 121


>At3g51880.1 68416.m05689 high mobility group protein alpha
           (HMGalpha) / HMG protein alpha nearly identical to HMG
           protein (HMGalpha) [Arabidopsis thaliana] GI:2832357;
           contains Pfam profile PF00505: HMG (high mobility group)
           box
          Length = 178

 Score = 65.3 bits (152), Expect = 5e-11
 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 1/82 (1%)

Query: 187 RKRQQMKDPNAPKRSLSAFFLFCNDERSKVKAGNPEY-TMGDIAKELGRRWAAADPETKA 245
           ++++  KDPN PKR+ SAFF+F  D R   K  NP    +  + K  G++W +     KA
Sbjct: 42  KEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKA 101

Query: 246 KYDALSEKDKARYDREMTAYKK 267
            Y+  + K KA Y+++M AY K
Sbjct: 102 PYEEKAAKRKAEYEKQMDAYNK 123



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 105 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQ 164
           NKP+   +A+  F++  R   KK+ P+V  + +A  K   ++W +MS+ EK  + E A +
Sbjct: 51  NKPKRAPSAFFVFLEDFRVTFKKENPNVKAV-SAVGKAGGQKWKSMSQAEKAPYEEKAAK 109

Query: 165 DKHRFDLEMQNY 176
            K  ++ +M  Y
Sbjct: 110 RKAEYEKQMDAY 121


>At2g17560.1 68415.m02032 high mobility group protein gamma
           (HMGgamma) / HMG protein gamma nearly identical to HMG
           protein (HMGgamma) [Arabidopsis thaliana] GI:2832355
          Length = 138

 Score = 65.3 bits (152), Expect = 5e-11
 Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 3/87 (3%)

Query: 182 MKVRGRK--RQQMKDPNAPKRSLSAFFLFCNDERSKVKAGNP-EYTMGDIAKELGRRWAA 238
           +K RGRK  ++  KDPN PKR  SAFF+F  D R +    NP   ++  + K  G RW A
Sbjct: 17  LKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKA 76

Query: 239 ADPETKAKYDALSEKDKARYDREMTAY 265
              E KA Y A +E  K  Y + +  Y
Sbjct: 77  MTDEDKAPYVAKAESRKTEYIKNVQQY 103



 Score = 35.1 bits (77), Expect = 0.057
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 1/82 (1%)

Query: 95  KARMPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKE 154
           KA     +  N+P+   +A+  F++  R+E     P+   + A   K    RW  M++++
Sbjct: 23  KAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSV-ATVGKAAGARWKAMTDED 81

Query: 155 KQRFHEMAEQDKHRFDLEMQNY 176
           K  +   AE  K  +   +Q Y
Sbjct: 82  KAPYVAKAESRKTEYIKNVQQY 103


>At4g11080.1 68417.m01800 high mobility group (HMG1/2) family
           protein similar to SP|P40618 High mobility group protein
           HMG2A {Gallus gallus}; contains Pfam profile PF00505:
           HMG (high mobility group) box
          Length = 446

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 2/81 (2%)

Query: 187 RKRQQMKDPNAPKRSLSAFFLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAK 246
           +K +++KDP  PK+ +SA+ ++ N+ R+ +K  N      ++AK  G  W     E KA 
Sbjct: 235 KKAKKIKDPLKPKQPISAYLIYANERRAALKGENKSVI--EVAKMAGEEWKNLSEEKKAP 292

Query: 247 YDALSEKDKARYDREMTAYKK 267
           YD +++K+K  Y +EM  YK+
Sbjct: 293 YDQMAKKNKEIYLQEMEGYKR 313



 Score = 57.6 bits (133), Expect = 9e-09
 Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 3/130 (2%)

Query: 141 KKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQ---NYVPPKDMKVRGRKRQQMKDPNA 197
           K+  E      +KE++ F ++ +Q+  +   + +   N +       + +K+ +  DPN 
Sbjct: 312 KRTKEEEAMSQKKEEEEFMKLHKQEALQLLKKKEKTDNIIKKTKETAKNKKKNENVDPNK 371

Query: 198 PKRSLSAFFLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKYDALSEKDKAR 257
           PK+  S++FLFC D R  V   +P      +   +  +W     E K  Y++ + +    
Sbjct: 372 PKKPTSSYFLFCKDARKSVLEEHPGINNSTVTAHISLKWMELGEEEKQVYNSKAAELMEA 431

Query: 258 YDREMTAYKK 267
           Y +E+  Y K
Sbjct: 432 YKKEVEEYNK 441



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 2/83 (2%)

Query: 185 RGRKRQQMKDPNAPKRSLSAFFLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETK 244
           +G+K++  KD    KR  + + L+C D  ++VK  NPE    + +  LG +W     E K
Sbjct: 118 KGKKKK--KDCAETKRPSTPYILWCKDNWNEVKKQNPEADFKETSNILGAKWKGISAEEK 175

Query: 245 AKYDALSEKDKARYDREMTAYKK 267
             Y+   + DK  Y + +T  K+
Sbjct: 176 KPYEEKYQADKEAYLQVITKEKR 198



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 94  NKARMPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEK 153
           NK +  + +   KP+  ++AY  +    R   K +  + SVI  A  K   E W  +SE+
Sbjct: 233 NKKKAKKIKDPLKPKQPISAYLIYANERRAALKGE--NKSVIEVA--KMAGEEWKNLSEE 288

Query: 154 EKQRFHEMAEQDKHRFDLEMQNYVPPKDMKVRGRKRQQ 191
           +K  + +MA+++K  +  EM+ Y   K+ +   +K+++
Sbjct: 289 KKAPYDQMAKKNKEIYLQEMEGYKRTKEEEAMSQKKEE 326


>At4g35570.1 68417.m05054 high mobility group protein delta
           (HMGdelta) / HMG protein delta identical to HMG protein
           (HMGdelta) [Arabidopsis thaliana] GI:2832363
          Length = 125

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%)

Query: 182 MKVRGRK-RQQMKDPNAPKRSLSAFFLFCNDERSKVKAGNPE-YTMGDIAKELGRRWAAA 239
           +KVRG K  ++ KDPN PK+  S FF+F +D R +    NP+  ++G++ +  G++W   
Sbjct: 17  LKVRGNKVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKWKTM 76

Query: 240 DPETKAKYDALSEKDKARYDREMTAY 265
             E +A + A S+  K  Y   M  Y
Sbjct: 77  TEEERAPFVAKSQSKKTEYAVTMQQY 102



 Score = 35.5 bits (78), Expect = 0.043
 Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 1/77 (1%)

Query: 100 RSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFH 159
           +++  N+P+   + +  F+   R+E     PD   +     +   ++W TM+E+E+  F 
Sbjct: 27  KTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSV-GNVGRAAGKKWKTMTEEERAPFV 85

Query: 160 EMAEQDKHRFDLEMQNY 176
             ++  K  + + MQ Y
Sbjct: 86  AKSQSKKTEYAVTMQQY 102


>At1g20696.1 68414.m02593 high mobility group protein beta2
           (HMGbeta2) / HMG protein beta2 nearly identical to HMG
           protein (HMGbeta2) [Arabidopsis thaliana] GI:2832361
          Length = 141

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 193 KDPNAPKRSLSAFFLFCNDERSKVKAGNPE-YTMGDIAKELGRRWAAADPETKAKYDALS 251
           KDPN PKR  SAFF+F  D R   K  +P+  ++  + K  G +W +     KA Y A +
Sbjct: 30  KDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKA 89

Query: 252 EKDKARYDREMTAYKK 267
           +K K  Y++ M AY K
Sbjct: 90  DKRKVEYEKNMKAYNK 105


>At4g23800.1 68417.m03422 high mobility group (HMG1/2) family
           protein similar to HMG2B [Homo sapiens] GI:32335;
           contains Pfam profile PF00505: HMG (high mobility group)
           box
          Length = 456

 Score = 57.6 bits (133), Expect = 9e-09
 Identities = 32/120 (26%), Positives = 64/120 (53%), Gaps = 7/120 (5%)

Query: 152 EKEKQRFHEMAEQDKHRFDLEMQ----NYVPPKDMKVRGRKRQQMKDPNAPKRSLSAFFL 207
           ++EK+    + +  K R  +E+     N+V   +   + +K ++ KDP  PK  +SAF +
Sbjct: 206 KREKEAMKLLEDDQKQRTAMELLDQYLNFVQEAEQDNK-KKNKKEKDPLKPKHPVSAFLV 264

Query: 208 FCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKYDALSEKDKARYDREMTAYKK 267
           + N+ R+ ++  N   ++ ++AK  G  W     + KA Y+ +++K+K  Y + M  YK+
Sbjct: 265 YANERRAALREENK--SVVEVAKITGEEWKNLSDKKKAPYEKVAKKNKETYLQAMEEYKR 322



 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 27/88 (30%), Positives = 41/88 (46%)

Query: 180 KDMKVRGRKRQQMKDPNAPKRSLSAFFLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAA 239
           K  K   +K+ +  DPN PK+  S++FLF  DER K+    P      +   +  +W   
Sbjct: 361 KKEKATKKKKNENVDPNKPKKPASSYFLFSKDERKKLTEERPGTNNATVTALISLKWKEL 420

Query: 240 DPETKAKYDALSEKDKARYDREMTAYKK 267
             E K  Y+  + K    Y +E+ AY K
Sbjct: 421 SEEEKQVYNGKAAKLMEAYKKEVEAYNK 448



 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 21/70 (30%), Positives = 37/70 (52%)

Query: 189 RQQMKDPNAPKRSLSAFFLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKYD 248
           +++ KD    KR  S++ L+C D+ ++VK  NPE    + +  LG +W +   E K  Y+
Sbjct: 129 KKKKKDCPETKRPSSSYVLWCKDQWTEVKKENPEADFKETSNILGAKWKSLSAEDKKPYE 188

Query: 249 ALSEKDKARY 258
              + +K  Y
Sbjct: 189 ERYQVEKEAY 198



 Score = 36.7 bits (81), Expect = 0.019
 Identities = 21/98 (21%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 94  NKARMPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEK 153
           NK +  + +   KP+  ++A+  +    R   +++  + SV+  A  K   E W  +S+K
Sbjct: 242 NKKKNKKEKDPLKPKHPVSAFLVYANERRAALREE--NKSVVEVA--KITGEEWKNLSDK 297

Query: 154 EKQRFHEMAEQDKHRFDLEMQNYVPPKDMKVRGRKRQQ 191
           +K  + ++A+++K  +   M+ Y   K+ +   +K+++
Sbjct: 298 KKAPYEKVAKKNKETYLQAMEEYKRTKEEEALSQKKEE 335



 Score = 29.1 bits (62), Expect = 3.7
 Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 105 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQ 164
           NKP+   ++Y  F +  R++  ++ P  +   A  +   + +W  +SE+EKQ ++  A +
Sbjct: 377 NKPKKPASSYFLFSKDERKKLTEERPGTNN--ATVTALISLKWKELSEEEKQVYNGKAAK 434

Query: 165 DKHRFDLEMQNY 176
               +  E++ Y
Sbjct: 435 LMEAYKKEVEAY 446


>At2g34450.1 68415.m04227 high mobility group (HMG1/2) family
           protein similar to HMG protein [Arabidopsis thaliana]
           GI:2832361; contains Pfam profile PF00505: HMG (high
           mobility group) box
          Length = 151

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)

Query: 178 PPKDMKVRGRKRQQMKDPNAPKRSLSAFFLFCNDERSKVKAGNPEY-TMGDIAKELGRRW 236
           P +  K   +K+        PK+  +AFF F +D R + +  NP+  +M +I K  G +W
Sbjct: 43  PLRKPKTSPKKKPVKLQTKMPKKPATAFFFFLDDFRKQYQEENPDVKSMREIGKTCGEKW 102

Query: 237 AAADPETKAKYDALSEKDKARYDREMTAYKK 267
                E K KY  ++ + +  + R MT Y K
Sbjct: 103 KTMTYEEKVKYYDIATEKREEFHRAMTEYTK 133



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)

Query: 107 PRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDK 166
           P+   TA+ FF+   R++++++ PDV  +     K C E+W TM+ +EK +++++A + +
Sbjct: 63  PKKPATAFFFFLDDFRKQYQEENPDVKSM-REIGKTCGEKWKTMTYEEKVKYYDIATEKR 121

Query: 167 HRFDLEMQNY 176
             F   M  Y
Sbjct: 122 EEFHRAMTEY 131


>At1g76110.1 68414.m08838 high mobility group (HMG1/2) family
           protein / ARID/BRIGHT DNA-binding domain-containing
           protein low similarity to high mobility group protein
           [Plasmodium falciparum] GI:790198; contains Pfam
           profiles PF00505: HMG (high mobility group) box,
           PF01388: ARID/BRIGHT DNA binding domain
          Length = 338

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)

Query: 187 RKRQQMKDPNAPKRSLSAFFLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAK 246
           R+ ++ +DPN PK + S +  F  ++  K+K+  P     +  K +G  W+    E +  
Sbjct: 244 RRSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKER-EFTKLIGESWSNLSTEERMV 302

Query: 247 YDALSEKDKARYDREMTAYKK 267
           Y  +  KDK RY RE+  Y++
Sbjct: 303 YQDIGLKDKERYQRELNEYRE 323



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 3/82 (3%)

Query: 95  KARMPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKE 154
           + R  R    N P+   + Y FF      + K  YP+       F+K   E W+ +S +E
Sbjct: 243 RRRSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKE---REFTKLIGESWSNLSTEE 299

Query: 155 KQRFHEMAEQDKHRFDLEMQNY 176
           +  + ++  +DK R+  E+  Y
Sbjct: 300 RMVYQDIGLKDKERYQRELNEY 321


>At5g23420.1 68418.m02747 high mobility group (HMG1/2) family
           protein similar to high mobility group protein 2 HMG2
           [Ipomoea nil] GI:1052956; contains Pfam profile PF00505:
           HMG (high mobility group) box
          Length = 241

 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 26/84 (30%), Positives = 42/84 (50%)

Query: 179 PKDMKVRGRKRQQMKDPNAPKRSLSAFFLFCNDERSKVKAGNPEYTMGDIAKELGRRWAA 238
           PK +K    +++     N PKR L+AFF+F +D R   K+ +      D AK  G +W +
Sbjct: 96  PKRLKKTNDEKKSSSTSNKPKRPLTAFFIFMSDFRKTFKSEHNGSLAKDAAKIGGEKWKS 155

Query: 239 ADPETKAKYDALSEKDKARYDREM 262
              E K  Y   + + KA Y++ +
Sbjct: 156 LTEEEKKVYLDKAAELKAEYNKSL 179



 Score = 33.5 bits (73), Expect = 0.17
 Identities = 18/71 (25%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 105 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQ 164
           NKP+  +TA+  F+   R+  K ++       AA  K   E+W +++E+EK+ + + A +
Sbjct: 113 NKPKRPLTAFFIFMSDFRKTFKSEHNGSLAKDAA--KIGGEKWKSLTEEEKKVYLDKAAE 170

Query: 165 DKHRFDLEMQN 175
            K  ++  +++
Sbjct: 171 LKAEYNKSLES 181


>At1g04880.1 68414.m00485 high mobility group (HMG1/2) family
           protein / ARID/BRIGHT DNA-binding domain-containing
           protein low similarity to SP|O15347|HMG4_HUMAN High
           mobility group protein 4 (HMG-4) (High mobility group
           protein 2a) (HMG-2a) {Homo sapiens}; contains Pfam
           profiles PF00505: HMG (high mobility group) box,
           PF01388: ARID/BRIGHT DNA binding domain
          Length = 448

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 4/122 (3%)

Query: 148 NTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPPKDMKVRGRKRQQMK--DPNAPKRSLSAF 205
           NT+S +  Q+ H +     +      Q        + R RK+ ++K  DP+ PK + S +
Sbjct: 212 NTVSYQTPQQSHGVLPNTLN-ISANPQGVAGGVTKRRRRRKKSEIKRRDPDHPKPNRSGY 270

Query: 206 FLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKYDALSEKDKARYDREMTAY 265
             F  ++ +++K  +P     DI++ +G  W   + + K  Y   + +DK RY  EM  Y
Sbjct: 271 NFFFAEQHARLKPLHPGKDR-DISRMIGELWNKLNEDEKLIYQGKAMEDKERYRTEMEDY 329

Query: 266 KK 267
           ++
Sbjct: 330 RE 331



 Score = 38.3 bits (85), Expect = 0.006
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 95  KARMPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKE 154
           K+ + R  P + P+   + Y FF     E+H +  P         S+   E WN ++E E
Sbjct: 252 KSEIKRRDP-DHPKPNRSGYNFFFA---EQHARLKPLHPGKDRDISRMIGELWNKLNEDE 307

Query: 155 KQRFHEMAEQDKHRFDLEMQNY 176
           K  +   A +DK R+  EM++Y
Sbjct: 308 KLIYQGKAMEDKERYRTEMEDY 329


>At3g13350.1 68416.m01680 high mobility group (HMG1/2) family
           protein / ARID/BRIGHT DNA-binding domain-containing
           protein low similarity to Dead Ringer Protein Chain A
           Dna-Binding Domain (GI:6573608), Arid-Dna Complex
           (GI:20150982) from [Drosophila melanogaster]; contains
           Pfam profiles PF00505: HMG (high mobility group) box,
           PF01388: ARID/BRIGHT DNA binding domain
          Length = 319

 Score = 38.7 bits (86), Expect = 0.005
 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 3/71 (4%)

Query: 106 KPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQD 165
           KP+   + Y FF     E++ +  P+      + +KK    W+ ++E EKQ + +   +D
Sbjct: 237 KPKCHRSGYNFFFA---EQYARLKPEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKD 293

Query: 166 KHRFDLEMQNY 176
             R+ +EM  Y
Sbjct: 294 VERYRIEMLEY 304



 Score = 35.5 bits (78), Expect = 0.043
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 7/86 (8%)

Query: 185 RGRKRQQMK--DPNAPKRSLSAFFLFCNDERSKVKAGNPEYTMGD--IAKELGRRWAAAD 240
           R RK+ ++   D   PK   S +  F  ++ +++K   PEY   +  I K++G  W+   
Sbjct: 223 RHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLK---PEYHGQERSITKKIGHMWSNLT 279

Query: 241 PETKAKYDALSEKDKARYDREMTAYK 266
              K  Y     KD  RY  EM  YK
Sbjct: 280 ESEKQVYQDKGVKDVERYRIEMLEYK 305


>At1g55650.1 68414.m06370 high mobility group (HMG1/2) family
           protein / ARID/BRIGHT DNA-binding domain-containing
           protein low similarity to Dead Ringer Protein Chain A
           Dna-Binding Domain (GI:6573608), Arid-Dna Complex
           (GI:20150982) from [Drosophila melanogaster]; contains
           Pfam profiles PF00505: HMG (high mobility group) box,
           PF01388: ARID/BRIGHT DNA binding domain
          Length = 337

 Score = 35.1 bits (77), Expect = 0.057
 Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 3/82 (3%)

Query: 95  KARMPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKE 154
           KA+  +   +  P+ + T Y FFV       K +     V   +  K     W  +SE +
Sbjct: 203 KAKSSQGDSHKPPKRQRTGYNFFVAEQSVRIKAENAGQKV---SSPKNFGNMWTNLSESD 259

Query: 155 KQRFHEMAEQDKHRFDLEMQNY 176
           ++ ++E + +D  R+ +E+  Y
Sbjct: 260 RKVYYEKSREDGKRYKMEILQY 281


>At1g69180.1 68414.m07917 transcription factor CRC (CRABS CLAW)
           identical to transcription factor CRC (CRABS CLAW)
           GI:4836698 [Arabidopsis thaliana]
          Length = 181

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 15/52 (28%), Positives = 24/52 (46%)

Query: 192 MKDPNAPKRSLSAFFLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPET 243
           +K P   +R  SA+  F  DE  ++K+ NPE    +      + WA   P +
Sbjct: 109 VKPPEKKQRLPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKYIPNS 160


>At4g00180.1 68417.m00019 axial regulator YABBY3 (YABBY3) identical
           to YABBY3 [Arabidopsis thaliana] GI:4928753
          Length = 240

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/45 (28%), Positives = 23/45 (51%)

Query: 193 KDPNAPKRSLSAFFLFCNDERSKVKAGNPEYTMGDIAKELGRRWA 237
           + P   +R  SA+  F  +E  ++KAGNP+ +  +      + WA
Sbjct: 148 RPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWA 192


>At4g00170.1 68417.m00018 vesicle-associated membrane family protein
           / VAMP family protein similar to VAP27 GI:6688926
           [Nicotiana plumbaginifolia]
          Length = 239

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/45 (31%), Positives = 25/45 (55%)

Query: 129 YPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMAEQDKHRFDLEM 173
           + DVS  F   S+K +E W+ +S+  +++     +  K R +LEM
Sbjct: 160 FDDVSRTFEETSEKSSEAWSMISKLTEEKTSATQQSQKLRLELEM 204


>At2g45190.1 68415.m05627 axial regulator YABBY1 (YABBY1) / abnormal
           floral organs protein (AFO) / filamentous flower protein
           (FIL) identical to YABBY1 [Arabidopsis thaliana]
           GI:4928749, abnormal floral organs protein (AFO)
           [Arabidopsis thaliana] GI:4322477; supporting cDNA
           gi|4322476|gb|AF087015.1|AF087015
          Length = 229

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 13/45 (28%), Positives = 23/45 (51%)

Query: 193 KDPNAPKRSLSAFFLFCNDERSKVKAGNPEYTMGDIAKELGRRWA 237
           + P   +R  SA+  F  +E  ++KAGNP+ +  +      + WA
Sbjct: 136 RPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWA 180


>At2g36270.1 68415.m04452 bZIP transcription factor family protein /
           ABA-responsive element-binding protein, putative similar
           to ABA-responsive element binding protein 1 (AREB1)
           GI:9967417 from [Arabidopsis thaliana]; contains a bZIP
           transcription factor basic domain signature (PDOC00036)
          Length = 442

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 138 AFSKKCAERWNTMSEKEKQRFHEMAEQDKHR---FDLEMQNYVPPKDMKVRGRKRQQMKD 194
           A++ +     N + E+  Q  H +AE ++ R   +   +++   PK  K  GR R  M++
Sbjct: 378 AYTVELEAELNQLKEENAQLKHALAELERKRKQQYFESLKSRAQPKLPKSNGRLRTLMRN 437

Query: 195 PNAP 198
           P+ P
Sbjct: 438 PSCP 441


>At1g56660.1 68414.m06516 expressed protein
          Length = 522

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 6/123 (4%)

Query: 145 ERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPPKDMKVRGRKRQQMKDPNAPKRSLSA 204
           E  N  ++KEK+  HE   Q+K   + E       K+    G + ++ K     K+   +
Sbjct: 147 EEKNKKADKEKK--HEDVSQEKEELEEEDGKKNKKKEKDESGTEEKKKKPKKEKKQKEES 204

Query: 205 FFLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKYDALSEKDKARYDREMTA 264
                ++E  KVK    +   GD+ KE   +    D   +   +  S+K+K +   E  A
Sbjct: 205 K----SNEDKKVKGKKEKGEKGDLEKEDEEKKKEHDETDQEMKEKDSKKNKKKEKDESCA 260

Query: 265 YKK 267
            +K
Sbjct: 261 EEK 263


>At1g58225.1 68414.m06614 expressed protein
          Length = 143

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/67 (22%), Positives = 28/67 (41%)

Query: 103 PYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQRFHEMA 162
           P  +P G  +   FF    +++  K +P  +     F+    E W T+  K +  F  ++
Sbjct: 33  PSYEPVGSYSTGGFFAVENKDKMLKSFPSYNEYLKRFNLASVEIWQTVRRKCRDSFISLS 92

Query: 163 EQDKHRF 169
            +  H F
Sbjct: 93  IKSLHFF 99


>At2g38800.1 68415.m04764 calmodulin-binding protein-related
           contains similarity to potato calmodulin-binding protein
           PCBP GI:17933110 from [Solanum tuberosum]
          Length = 612

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)

Query: 164 QDKHRFDLE-MQNYVPPKDMKVRGRKRQQMKDPNAPKRSLSAFFLFCNDERSKVKAGNPE 222
           Q + RF  E ++N  P   M  R + R+++KD +   +S  +  L  +D   KV  G+P 
Sbjct: 18  QPETRFGQEHLKNLGPEMMMMKRTKPRRKLKDNHVSSQSGKSQELPKHDLVVKVIGGSPN 77

Query: 223 YTMGDIAKE 231
           Y  G  + E
Sbjct: 78  YMKGTSSSE 86


>At3g53490.1 68416.m05905 expressed protein ADAM 13, Xenopus laevis,
           EMBL:XLU66003
          Length = 225

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 121 CREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKE--KQRFHEMAEQDKHRFDLEMQNYVP 178
           C+ E+K   PDV     ++S    E W  ++E +  K +   + E D  ++D   +  + 
Sbjct: 58  CKGENKTVLPDVKRTNVSYSFNGEESWQPLTELQGTKCKRCGIYEDDPLKYDTFDEWELC 117

Query: 179 PKDMKVRGR-KRQQMKDPNA 197
           P D    G  KR + K+ NA
Sbjct: 118 PSDFTAEGSYKRFKEKEFNA 137


>At2g26580.2 68415.m03189 plant-specific transcription factor YABBY
           family protein contains Pfam profile: PF04690 YABBY
           protein
          Length = 164

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 193 KDPNAPKRSLSAFFLFCNDERSKVKAGNPEYTMGDIAKELGRRWA 237
           + P   +R  SA+  F  +E  ++KA NP+ +  +      + WA
Sbjct: 100 RPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWA 144


>At2g26580.1 68415.m03188 plant-specific transcription factor YABBY
           family protein contains Pfam profile: PF04690 YABBY
           protein
          Length = 164

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 193 KDPNAPKRSLSAFFLFCNDERSKVKAGNPEYTMGDIAKELGRRWA 237
           + P   +R  SA+  F  +E  ++KA NP+ +  +      + WA
Sbjct: 100 RPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWA 144


>At5g23405.2 68418.m02742 high mobility group (HMG1/2) family
           protein contains Pfam profile PF00505: HMG (high
           mobility group) box
          Length = 148

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 6/79 (7%)

Query: 100 RSRPYNKPRGR--MTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQR 157
           + +P NK +    +T +A F+   R+  +  Y    V     SK   E W +M+E EK+ 
Sbjct: 53  KKKPTNKKKSTTSLTDFAVFMNHFRKSFRTDYNGALV--KEGSKIGWEMWKSMTEDEKKD 110

Query: 158 FHEMA--EQDKHRFDLEMQ 174
           + + A  E+D+    +E Q
Sbjct: 111 YLDKAADEEDEDEDTVEEQ 129


>At5g23405.1 68418.m02741 high mobility group (HMG1/2) family
           protein contains Pfam profile PF00505: HMG (high
           mobility group) box
          Length = 149

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 6/79 (7%)

Query: 100 RSRPYNKPRGR--MTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQR 157
           + +P NK +    +T +A F+   R+  +  Y    V     SK   E W +M+E EK+ 
Sbjct: 54  KKKPTNKKKSTTSLTDFAVFMNHFRKSFRTDYNGALV--KEGSKIGWEMWKSMTEDEKKD 111

Query: 158 FHEMA--EQDKHRFDLEMQ 174
           + + A  E+D+    +E Q
Sbjct: 112 YLDKAADEEDEDEDTVEEQ 130


>At4g12460.1 68417.m01971 oxysterol-binding family protein similar
           to SP|P22059 Oxysterol-binding protein 1 {Homo sapiens};
           contains Pfam profiles PF00169: PH domain, PF01237:
           Oxysterol-binding protein
          Length = 694

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 142 KCAERWNTMSEKEKQRFHEMAEQDKHRFDLEMQNYVPPK--DMKVRGRKRQQMKDPNAPK 199
           K +E   + S  +KQ F +++E+D+  F    +++  P    +    ++R ++ DP   +
Sbjct: 261 KYSECSTSASSDDKQEFEDISEEDEASFHDTKESFGEPDVGSVLTHFKRRTKLPDPAEKE 320

Query: 200 RSLS 203
           R +S
Sbjct: 321 RGVS 324


>At3g21640.1 68416.m02729 FKBP-type peptidyl-prolyl cis-trans
           isomerase family protein similar to rof1 [Arabidopsis
           thaliana] GI:1354207; contains Pfam profile: PF00254
           FKBP-type peptidyl-prolyl cis-trans isomerases
          Length = 365

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 213 RSKVKAGNPEYTMGDIAKELGRRWAAADPETKAKYDALSEKDKARYDREMTAYK 266
           ++K + G  +    D  K   +++A  D   + +  AL+E++KA Y ++   YK
Sbjct: 272 KAKAELGQMDSARDDFRK--AQKYAPDDKAIRRELRALAEQEKALYQKQKEMYK 323


>At2g17970.1 68415.m02084 oxidoreductase, 2OG-Fe(II) oxygenase
           family protein similar to At2g17960, At4g36090; contains
           PF03171 2OG-Fe(II) oxygenase superfamily domain
          Length = 507

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 155 KQRFHEMAEQDKHRFDLEMQNYVPPKDMKVRGRKRQQMKDPNAPKRS 201
           + R+ +MA++D+  FD E +     +D   +G     MK P  PK S
Sbjct: 137 RMRWADMAQEDE--FDEEEEEEEEERDSSRKGFDASSMKTPEKPKLS 181


>At1g78810.2 68414.m09186 expressed protein
          Length = 480

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 14/88 (15%)

Query: 175 NYVPPKDMKVRGR-----KRQQMKDPNAPKRSLSAFFLFCNDERSKVKAGNPEYTMGDIA 229
           NY+PP D+++  R      +   ++PN P+       L+ N++R +  +G  E+ + D+ 
Sbjct: 49  NYIPPSDLQLLSRYGAVTPQIISRNPNNPQN------LYNNNKRPRPDSGR-EWPVNDVP 101

Query: 230 K--ELGRRWAAADPETKAKYDALSEKDK 255
           +    G  W    P  K +  +  EK+K
Sbjct: 102 QPPSTGSGWPEYRPCKKTRPISAEEKEK 129


>At1g78810.1 68414.m09185 expressed protein
          Length = 481

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 14/88 (15%)

Query: 175 NYVPPKDMKVRGR-----KRQQMKDPNAPKRSLSAFFLFCNDERSKVKAGNPEYTMGDIA 229
           NY+PP D+++  R      +   ++PN P+       L+ N++R +  +G  E+ + D+ 
Sbjct: 49  NYIPPSDLQLLSRYGAVTPQIISRNPNNPQN------LYNNNKRPRPDSGR-EWPVNDVP 101

Query: 230 K--ELGRRWAAADPETKAKYDALSEKDK 255
           +    G  W    P  K +  +  EK+K
Sbjct: 102 QPPSTGSGWPEYRPCKKTRPISAEEKEK 129


>At1g23420.1 68414.m02934 inner no outer protein (INO) identical to
           INNER NO OUTER (INO) [Arabidopsis thaliana] GI:6684816
          Length = 231

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/49 (28%), Positives = 22/49 (44%)

Query: 193 KDPNAPKRSLSAFFLFCNDERSKVKAGNPEYTMGDIAKELGRRWAAADP 241
           K P   +R+ SA+  F  +E  ++KA NP     +      + WA   P
Sbjct: 130 KPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPP 178


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.130    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,460,522
Number of Sequences: 28952
Number of extensions: 177111
Number of successful extensions: 598
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 539
Number of HSP's gapped (non-prelim): 55
length of query: 297
length of database: 12,070,560
effective HSP length: 81
effective length of query: 216
effective length of database: 9,725,448
effective search space: 2100696768
effective search space used: 2100696768
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)

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