GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001131-TA|BGIBMGA001131-PA|IPR001247|Exoribonuclease
         (375 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    24   5.9  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   5.9  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    24   7.9  

>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 13/61 (21%), Positives = 26/61 (42%)

Query: 281 KDDNLRQKREKINFSDIITTEHMLALSRKDLNIQLKHYDVTELDEKDEEMFSDEDDIKPE 340
           K D  R +++    SD  +++   + S    + +   +D     E D +  S E+  +P 
Sbjct: 437 KRDQYRLRKQNDTSSDSSSSDDSSSSSSSSSSSESDEHDFYSSSESDSDSLSSEEFYQPI 496

Query: 341 P 341
           P
Sbjct: 497 P 497


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 13/61 (21%), Positives = 26/61 (42%)

Query: 281 KDDNLRQKREKINFSDIITTEHMLALSRKDLNIQLKHYDVTELDEKDEEMFSDEDDIKPE 340
           K D  R +++    SD  +++   + S    + +   +D     E D +  S E+  +P 
Sbjct: 437 KRDQYRLRKQNDTSSDSSSSDDSSSSSSSSSSSESDEHDFYSSSESDSDSLSSEEFYQPI 496

Query: 341 P 341
           P
Sbjct: 497 P 497


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 7.9
 Identities = 13/50 (26%), Positives = 24/50 (48%)

Query: 295 SDIITTEHMLALSRKDLNIQLKHYDVTELDEKDEEMFSDEDDIKPEPSKY 344
           +DII  EH L +    +   + H+D        +E   ++ +IKP+  +Y
Sbjct: 279 TDIIMGEHFLNMKDDSIVCNIGHFDCEINVTWLQENAVEKVNIKPQVDRY 328


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.134    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,084
Number of Sequences: 2123
Number of extensions: 15494
Number of successful extensions: 42
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 40
Number of HSP's gapped (non-prelim): 3
length of query: 375
length of database: 516,269
effective HSP length: 65
effective length of query: 310
effective length of database: 378,274
effective search space: 117264940
effective search space used: 117264940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)