Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001129-TA|BGIBMGA001129-PA|IPR009057|Homeodomain-like,
IPR000818|TEA/ATTS, IPR001139|Glycoside hydrolase, family 30
(671 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30397| Best HMM Match : TEA (HMM E-Value=1.2e-08) 143 4e-34
SB_8161| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 2e-31
SB_39315| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 2e-18
SB_929| Best HMM Match : LEA_3 (HMM E-Value=7.8) 87 4e-17
SB_25996| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 3e-13
SB_48706| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 1e-09
SB_25826| Best HMM Match : Ank (HMM E-Value=6.7e-37) 31 4.0
SB_22164| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.2
SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.9
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.1
>SB_30397| Best HMM Match : TEA (HMM E-Value=1.2e-08)
Length = 281
Score = 143 bits (347), Expect = 4e-34
Identities = 69/106 (65%), Positives = 90/106 (84%), Gaps = 2/106 (1%)
Query: 4 ADAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRK 63
A+ EG+W+ DIEQSFQEALAIYPPCGR+KI+LS + KMYGRNELIARYI ++TGK RTRK
Sbjct: 2 AEGEGLWAGDIEQSFQEALAIYPPCGRQKIMLSTKDKMYGRNELIARYILMKTGKMRTRK 61
Query: 64 QVSSHIQVLARRKLREIQAKLKVDGGVMKEKAMQSMSTLSSAQIVA 109
QV+SHIQVLAR+K+R+IQ+K+K D + + + M T+SSA+I++
Sbjct: 62 QVASHIQVLARKKIRQIQSKIK-DKPYLDDN-IHEMMTMSSAEILS 105
>SB_8161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 134 bits (324), Expect = 2e-31
Identities = 72/114 (63%), Positives = 81/114 (71%), Gaps = 3/114 (2%)
Query: 3 AADAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTR 62
A DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTR
Sbjct: 63 ANDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTR 122
Query: 63 KQVSSHIQVLARRKLREIQAKLKVDGGVMKEKAMQSMSTLSSAQIVAGLPHPAY 116
KQ + A + + + + V V+ K+M + S SA A P+Y
Sbjct: 123 KQ-DQAARDKALQTMASMSSAQIVSASVLHNKSMGTAS--MSAGYAAANESPSY 173
Score = 111 bits (267), Expect = 2e-24
Identities = 49/59 (83%), Positives = 53/59 (89%)
Query: 191 DTVETEYARFEGGRFVYRIHRSPMCEYMVNFIHKLKHLPEKYMMNSVLENFTILQDLNN 249
+ VETEY FE GRFVYRIHRSPMCEYM+NFIHKLK LPEKYMMNSVLENFTILQ ++N
Sbjct: 295 EKVETEYGHFENGRFVYRIHRSPMCEYMINFIHKLKQLPEKYMMNSVLENFTILQVVSN 353
Score = 30.3 bits (65), Expect = 5.2
Identities = 15/19 (78%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Query: 175 LRLVEFSAFVEHPR-DPDT 192
LRLVEFSAF+E R DPDT
Sbjct: 176 LRLVEFSAFLEQQRLDPDT 194
>SB_39315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 91.5 bits (217), Expect = 2e-18
Identities = 50/89 (56%), Positives = 66/89 (74%), Gaps = 4/89 (4%)
Query: 21 ALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKLREI 80
AL + P G R I D KMYGRNELIARYI ++TGK RTRKQV+SHIQVLAR+K+R+I
Sbjct: 12 ALELVDPPGCRNSITKD--KMYGRNELIARYILMKTGKMRTRKQVASHIQVLARKKIRQI 69
Query: 81 QAKLKVDGGVMKEKAMQSMSTLSSAQIVA 109
Q+K+K D + + + M T+SSA+I++
Sbjct: 70 QSKIK-DKPYLDDN-IHEMMTMSSAEILS 96
>SB_929| Best HMM Match : LEA_3 (HMM E-Value=7.8)
Length = 165
Score = 87.0 bits (206), Expect = 4e-17
Identities = 39/40 (97%), Positives = 39/40 (97%)
Query: 3 AADAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY 42
A DAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY
Sbjct: 81 ANDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMY 120
>SB_25996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 74.1 bits (174), Expect = 3e-13
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 356 AVTDAASLNWRKLPPAAQDKLIETYFGPNGLEYNMMRVPIGGSDFSTHPYTYNEQPWNDT 415
+ TDAA++N + Q KLI +YF P G+EY++ RVP+ DFSTH Y+Y++ D
Sbjct: 161 STTDAATMNILNQSNSLQQKLIRSYFSPVGIEYSIGRVPMASCDFSTHEYSYDDYS-GDF 219
Query: 416 ELSNFSLTNEDISFK 430
EL NFSL ED FK
Sbjct: 220 ELKNFSLAEEDKRFK 234
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 433 WIENNLGPTIRKSVFNRTLILGVDDQRLMLSAYMLGMEKAAPNSINYLDGIAVHYYEDFV 492
+I+ +LGP + + I+ +DDQRL L + + + A I+ + IA + +
Sbjct: 336 FIKEDLGPALSQEGHGNVQIIMLDDQRLFLDNW-VDVILALSELIDSILNIA-NAHRQCS 393
Query: 493 SPEILTNLHKRYPTKIIVA 511
SP ++ N H++ + +++A
Sbjct: 394 SPMLIANAHRQCSSPMLIA 412
>SB_48706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 62.1 bits (144), Expect = 1e-09
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 544 DLNNYVVGWIDWNLCLDPNGGPNWASNFVDSPIIVYEDKGEFVKQ 588
D++++VVGW+DWNL L+ +GGPNW +N VDSP+IV F +Q
Sbjct: 1 DISHWVVGWVDWNLALNMSGGPNWVNNNVDSPVIVDTTHHVFYQQ 45
Score = 57.2 bits (132), Expect = 4e-08
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 246 DLNNFVVRWIDWNLCLDPEGGPNWADNFVDSPILVYGDKDQFIKQ 290
D++++VV W+DWNL L+ GGPNW +N VDSP++V F +Q
Sbjct: 1 DISHWVVGWVDWNLALNMSGGPNWVNNNVDSPVIVDTTHHVFYQQ 45
>SB_25826| Best HMM Match : Ank (HMM E-Value=6.7e-37)
Length = 1041
Score = 30.7 bits (66), Expect = 4.0
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 74 RRKLREIQAKLKVDGGVMKEKAMQSMST--LSSAQIVAGLPHPAYHH 118
R+ LR I+A ++D V+ ++ + M T + A + GL HP Y H
Sbjct: 259 RKLLRRIKAH-ELDDDVITKEEFEKMDTQAIDDAMLALGLTHPRYRH 304
>SB_22164| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 30.3 bits (65), Expect = 5.2
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 26 PPCGRRK-IILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRK 76
PP R K +IL EGK+ +L R +++ KQV+ + +LAR K
Sbjct: 70 PPKRRGKALILRQEGKIQESLDLFQRTVQINPSNADNLKQVARSLFLLARHK 121
>SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1278
Score = 29.9 bits (64), Expect = 6.9
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 313 SRRSLAPIENVGLLTPNEENLLLVLQNRVDSTIKFQTIEGF 353
SR LAP LT EN ++ LQ R+D I+ +++E F
Sbjct: 1172 SRLRLAPWSTSRRLTRELENKIIELQQRLDQEIEARSVEHF 1212
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 29.5 bits (63), Expect = 9.1
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 5 DAEGVWSPDIEQSFQ---------EALAIYPPCGRRKIILSDEGKMYGRNELIA 49
DA+ +W PD +Q+FQ E LA+Y P +R+ I++ + G+ +L A
Sbjct: 2278 DAQWLWGPDQQQAFQRIKEVLASSEVLALYRP--KRETIIAADTSNAGKQQLTA 2329
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.136 0.423
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,640,986
Number of Sequences: 59808
Number of extensions: 936758
Number of successful extensions: 1729
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1716
Number of HSP's gapped (non-prelim): 14
length of query: 671
length of database: 16,821,457
effective HSP length: 87
effective length of query: 584
effective length of database: 11,618,161
effective search space: 6785006024
effective search space used: 6785006024
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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