GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001128-TA|BGIBMGA001128-PA|undefined
         (69 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    20   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    19   3.6  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    19   3.6  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    19   4.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    19   4.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    18   8.4  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 2.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 47  KHLDVGDASDDEKVIENK 64
           KH  VG++  DEK  E+K
Sbjct: 169 KHKIVGESVIDEKAEEHK 186



 Score = 20.2 bits (40), Expect = 2.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 36  PDTNGSGGA 44
           PD NG GGA
Sbjct: 369 PDENGEGGA 377


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query: 38  TNGSGGADAKHLDVGDASD 56
           T G GGA A  +D+ D S+
Sbjct: 956 TKGFGGAVAWTIDLDDFSN 974


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 8/23 (34%), Positives = 11/23 (47%)

Query: 37  DTNGSGGADAKHLDVGDASDDEK 59
           D +G G    +  D GD   +EK
Sbjct: 89  DDSGGGRGGGRDGDRGDGGGEEK 111


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 19.0 bits (37), Expect = 4.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 45  DAKHLDVGDASDDEKVIE 62
           D+ H D   ASDD+  I+
Sbjct: 114 DSCHADKSCASDDKSPID 131


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 19.0 bits (37), Expect = 4.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)

Query: 56  DDEKVIENKL 65
           DDEK I NK+
Sbjct: 404 DDEKSIRNKM 413


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 5/13 (38%), Positives = 7/13 (53%)

Query: 29  WSTPAGAPDTNGS 41
           W+ P   P  +GS
Sbjct: 412 WARPPSTPSADGS 424


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.311    0.130    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,010
Number of Sequences: 317
Number of extensions: 354
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 69
length of database: 114,650
effective HSP length: 44
effective length of query: 25
effective length of database: 100,702
effective search space:  2517550
effective search space used:  2517550
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.7 bits)
S2: 35 (18.2 bits)