GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001128-TA|BGIBMGA001128-PA|undefined
         (69 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   1.4  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    22   2.5  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    21   4.3  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    21   4.3  
AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical prote...    20   10.0 

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 38   TNGSGGADAKHLDVGDASDDEKVIENKLFMG 68
            T+ SG      + + D +D+  V E+K+F G
Sbjct: 1486 TSHSGNLLKATVYINDINDNSPVFESKIFTG 1516


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)

Query: 29  WSTPAGAPDTNGSGGADAKH 48
           W+T  G+  TN  G A  +H
Sbjct: 124 WATEWGSKSTNARGNAVLEH 143


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
          acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 47 KHLDVGDASDDEKVIENKLFMG 68
          ++L +G  S+DE+ +   LF G
Sbjct: 16 QYLGMGSCSEDEERLVRDLFRG 37


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)

Query: 33  AGAPDTNGSGGADAKH 48
           AG P T G  G  A+H
Sbjct: 204 AGIPGTKGEKGEPARH 219


>AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical
          protein protein.
          Length = 195

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query: 28 PWSTPAGAPDT 38
          PWS PA +P T
Sbjct: 31 PWSFPALSPTT 41


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.311    0.130    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,158
Number of Sequences: 2123
Number of extensions: 1962
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 69
length of database: 516,269
effective HSP length: 47
effective length of query: 22
effective length of database: 416,488
effective search space:  9162736
effective search space used:  9162736
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.5 bits)
S2: 39 (19.8 bits)