GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001128-TA|BGIBMGA001128-PA|undefined
         (69 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X60656-1|CAA43063.1|  225|Homo sapiens elongation factor 1-beta ...    27   7.1  
X60489-1|CAA43019.1|  225|Homo sapiens elongation factor-1-beta ...    27   7.1  
CR456825-1|CAG33106.1|  225|Homo sapiens EEF1B2 protein.               27   7.1  
BT007079-1|AAP35742.1|  225|Homo sapiens eukaryotic translation ...    27   7.1  
BC067787-1|AAH67787.1|  225|Homo sapiens eukaryotic translation ...    27   7.1  
BC004931-1|AAH04931.1|  225|Homo sapiens eukaryotic translation ...    27   7.1  
BC000211-1|AAH00211.1|  225|Homo sapiens eukaryotic translation ...    27   7.1  
AC007383-2|AAY15062.1|  225|Homo sapiens unknown protein.              27   7.1  

>X60656-1|CAA43063.1|  225|Homo sapiens elongation factor 1-beta
           protein.
          Length = 225

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 32  PAGAPDTNGSGGADAKHLDVGD--ASDDEKVIE 62
           PA   DT GSG  D+K  D  D   SDDE+  E
Sbjct: 81  PADVEDTTGSGATDSKDDDDIDLFGSDDEEESE 113


>X60489-1|CAA43019.1|  225|Homo sapiens elongation factor-1-beta
           protein.
          Length = 225

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 32  PAGAPDTNGSGGADAKHLDVGD--ASDDEKVIE 62
           PA   DT GSG  D+K  D  D   SDDE+  E
Sbjct: 81  PADVEDTTGSGATDSKDDDDIDLFGSDDEEESE 113


>CR456825-1|CAG33106.1|  225|Homo sapiens EEF1B2 protein.
          Length = 225

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 32  PAGAPDTNGSGGADAKHLDVGD--ASDDEKVIE 62
           PA   DT GSG  D+K  D  D   SDDE+  E
Sbjct: 81  PADVEDTTGSGATDSKDDDDIDLFGSDDEEESE 113


>BT007079-1|AAP35742.1|  225|Homo sapiens eukaryotic translation
           elongation factor 1 beta 2 protein.
          Length = 225

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 32  PAGAPDTNGSGGADAKHLDVGD--ASDDEKVIE 62
           PA   DT GSG  D+K  D  D   SDDE+  E
Sbjct: 81  PADVEDTTGSGATDSKDDDDIDLFGSDDEEESE 113


>BC067787-1|AAH67787.1|  225|Homo sapiens eukaryotic translation
           elongation factor 1 beta 2 protein.
          Length = 225

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 32  PAGAPDTNGSGGADAKHLDVGD--ASDDEKVIE 62
           PA   DT GSG  D+K  D  D   SDDE+  E
Sbjct: 81  PADVEDTTGSGATDSKDDDDIDLFGSDDEEESE 113


>BC004931-1|AAH04931.1|  225|Homo sapiens eukaryotic translation
           elongation factor 1 beta 2 protein.
          Length = 225

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 32  PAGAPDTNGSGGADAKHLDVGD--ASDDEKVIE 62
           PA   DT GSG  D+K  D  D   SDDE+  E
Sbjct: 81  PADVEDTTGSGATDSKDDDDIDLFGSDDEEESE 113


>BC000211-1|AAH00211.1|  225|Homo sapiens eukaryotic translation
           elongation factor 1 beta 2 protein.
          Length = 225

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 32  PAGAPDTNGSGGADAKHLDVGD--ASDDEKVIE 62
           PA   DT GSG  D+K  D  D   SDDE+  E
Sbjct: 81  PADVEDTTGSGATDSKDDDDIDLFGSDDEEESE 113


>AC007383-2|AAY15062.1|  225|Homo sapiens unknown protein.
          Length = 225

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 32  PAGAPDTNGSGGADAKHLDVGD--ASDDEKVIE 62
           PA   DT GSG  D+K  D  D   SDDE+  E
Sbjct: 81  PADVEDTTGSGATDSKDDDDIDLFGSDDEEESE 113


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.311    0.130    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,392,690
Number of Sequences: 224733
Number of extensions: 261562
Number of successful extensions: 405
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 405
Number of HSP's gapped (non-prelim): 8
length of query: 69
length of database: 73,234,838
effective HSP length: 48
effective length of query: 21
effective length of database: 62,447,654
effective search space: 1311400734
effective search space used: 1311400734
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 57 (27.1 bits)