GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001126-TA|BGIBMGA001126-PA|IPR002005|Rab GTPase
activator, IPR000632|Yeast Mrs6p protein
         (523 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    31   0.075
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    31   0.100
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    31   0.100
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    30   0.13 
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    30   0.13 
AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive ...    30   0.17 
AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1 prot...    30   0.17 
AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1 prot...    27   1.2  
AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A prot...    27   1.2  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    26   2.8  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    26   2.8  
AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding pr...    25   3.7  

>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 31.1 bits (67), Expect = 0.075
 Identities = 18/66 (27%), Positives = 27/66 (40%)

Query: 315 KKLNCDHLVIGVHECPEELMSSEPAESCDISKAVFVTNGTIMASEKEPLTLLRFPPLADD 374
           K L C+H    V +CP  L+ ++  + CD         G    +E  P      PP  D 
Sbjct: 42  KFLICNHGTPVVSQCPPGLLWNDSQKQCDYPSQAQCAPGVTPNTEPAPKPSPNCPPEYDP 101

Query: 375 DNAVTV 380
           D+ V +
Sbjct: 102 DHMVYI 107


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 30.7 bits (66), Expect = 0.100
 Identities = 18/66 (27%), Positives = 27/66 (40%)

Query: 315 KKLNCDHLVIGVHECPEELMSSEPAESCDISKAVFVTNGTIMASEKEPLTLLRFPPLADD 374
           K L C+H    V +CP  L+ ++  + CD         G    +E  P      PP  D 
Sbjct: 42  KFLICNHGTPVVSKCPPGLLWNDSQKQCDYPSQAQCAPGVTPNTEPAPKPSPNCPPEYDP 101

Query: 375 DNAVTV 380
           D+ V +
Sbjct: 102 DHMVYI 107


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 30.7 bits (66), Expect = 0.100
 Identities = 18/66 (27%), Positives = 27/66 (40%)

Query: 315 KKLNCDHLVIGVHECPEELMSSEPAESCDISKAVFVTNGTIMASEKEPLTLLRFPPLADD 374
           K L C+H    V +CP  L+ ++  + CD         G    +E  P      PP  D 
Sbjct: 42  KFLICNHGTPVVSKCPPGLLWNDSQKQCDYPSQAQCAPGVTPNTEPAPKPSPNCPPEYDP 101

Query: 375 DNAVTV 380
           D+ V +
Sbjct: 102 DHMVYI 107


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 30.3 bits (65), Expect = 0.13
 Identities = 18/66 (27%), Positives = 27/66 (40%)

Query: 315 KKLNCDHLVIGVHECPEELMSSEPAESCDISKAVFVTNGTIMASEKEPLTLLRFPPLADD 374
           K L C+H    V +CP  L+ ++  + CD         G    +E  P      PP  D 
Sbjct: 42  KFLICNHGTPVVSKCPPGLLWNDSQKQCDYPAQAQCAPGVTPNTEPAPKPSPNCPPEYDP 101

Query: 375 DNAVTV 380
           D+ V +
Sbjct: 102 DHMVYI 107


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 30.3 bits (65), Expect = 0.13
 Identities = 18/66 (27%), Positives = 27/66 (40%)

Query: 315 KKLNCDHLVIGVHECPEELMSSEPAESCDISKAVFVTNGTIMASEKEPLTLLRFPPLADD 374
           K L C+H    V +CP  L+ ++  + CD         G    +E  P      PP  D 
Sbjct: 42  KFLICNHGTPVVSKCPPGLLWNDSQKQCDYPAQAQCAPGVTPNTEPAPKPSPNCPPEYDP 101

Query: 375 DNAVTV 380
           D+ V +
Sbjct: 102 DHMVYI 107


>AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR20 protein.
          Length = 175

 Score = 29.9 bits (64), Expect = 0.17
 Identities = 18/72 (25%), Positives = 31/72 (43%)

Query: 320 DHLVIGVHECPEELMSSEPAESCDISKAVFVTNGTIMASEKEPLTLLRFPPLADDDNAVT 379
           D + +  ++C + ++S   A   DI   +   N  +M    EP      PP+ D D    
Sbjct: 15  DGICVYQYQCTDGVVSHSGANIIDIRHPLDDCNDHLMQCCAEPKQATTIPPITDGDADDQ 74

Query: 380 VLEVGPATGSCP 391
           V  V P++ + P
Sbjct: 75  VTIVPPSSTASP 86


>AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1
           protein.
          Length = 153

 Score = 29.9 bits (64), Expect = 0.17
 Identities = 18/66 (27%), Positives = 27/66 (40%)

Query: 315 KKLNCDHLVIGVHECPEELMSSEPAESCDISKAVFVTNGTIMASEKEPLTLLRFPPLADD 374
           K L C+H    V +CP  L+ ++  + CD         G    +E  P      PP  D 
Sbjct: 42  KFLICNHGTPVVSKCPPGLLWNDSQKQCDYPAQAQCAPGVTPNTEPVPKPSPNCPPEYDP 101

Query: 375 DNAVTV 380
           D+ V +
Sbjct: 102 DHMVYI 107


>AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1
           protein.
          Length = 153

 Score = 27.1 bits (57), Expect = 1.2
 Identities = 17/66 (25%), Positives = 26/66 (39%)

Query: 315 KKLNCDHLVIGVHECPEELMSSEPAESCDISKAVFVTNGTIMASEKEPLTLLRFPPLADD 374
           K L C+H    V +CP  L+ ++  + CD         G    +E         PP  D 
Sbjct: 42  KFLICNHGTPVVSKCPPGLLWNDSQKQCDYPAQAQCAPGVTPNTEPASKPSPNCPPEYDP 101

Query: 375 DNAVTV 380
           D+ V +
Sbjct: 102 DHMVYI 107


>AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 27.1 bits (57), Expect = 1.2
 Identities = 17/66 (25%), Positives = 26/66 (39%)

Query: 315 KKLNCDHLVIGVHECPEELMSSEPAESCDISKAVFVTNGTIMASEKEPLTLLRFPPLADD 374
           K L C+H    V +CP  L+ ++  + CD         G    +E         PP  D 
Sbjct: 42  KFLICNHGTPVVSKCPPGLLWNDSQKQCDYPAQAQCAPGVTPNTEPASKPSPNCPPEYDP 101

Query: 375 DNAVTV 380
           D+ V +
Sbjct: 102 DHMVYI 107


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 25.8 bits (54), Expect = 2.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)

Query: 218 GLTPNLIHYILYAIAGGNNSLPCLEGVKEC 247
           GL+P+L+H  L A+   N  L  L  V EC
Sbjct: 283 GLSPSLLHTKLNALLTPNRVLGMLLDVSEC 312


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 25.8 bits (54), Expect = 2.8
 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 11/82 (13%)

Query: 442 NVKDTSSPVSSVVDNVHVCSGPDAGLDFDRAVEQAEQIFKKICPGEEFLPRAPNPEEIVF 501
           +V +  S +   +D + +   P+A +D       AEQ       G+E    AP P   V 
Sbjct: 22  SVPEVPSDLQQQLDELQLADKPEAPVD------DAEQPLPP--NGDELPEDAPEP---VP 70

Query: 502 EDDVTHGPEFQREQDEEAEPKE 523
           ED        + EQ+EEAE  E
Sbjct: 71  EDGSPDEEHLEEEQEEEAEADE 92


>AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding
           protein AgamOBP11 protein.
          Length = 192

 Score = 25.4 bits (53), Expect = 3.7
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 8/84 (9%)

Query: 264 WPMYGSGELPQ-----CFCRLCAVFGGVYCLNRPIDKVETKTVDEGKTVVTIDSKSKKLN 318
           +P Y SG  P+     CF R  A+  GVYC  +  D ++   V  G      +  ++ L 
Sbjct: 78  FPSYLSGIFPEDPETKCFLRCVAIKLGVYCDEKGAD-LDRHCVQFGLGECCENFSNRHLV 136

Query: 319 CDHLVIGVHECPEELMSSEPAESC 342
           C  L      CP+   ++   E C
Sbjct: 137 C--LQQNSLPCPDRCTAAYKQELC 158


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.135    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,161
Number of Sequences: 2123
Number of extensions: 24356
Number of successful extensions: 117
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 109
Number of HSP's gapped (non-prelim): 13
length of query: 523
length of database: 516,269
effective HSP length: 67
effective length of query: 456
effective length of database: 374,028
effective search space: 170556768
effective search space used: 170556768
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 50 (24.2 bits)