Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001126-TA|BGIBMGA001126-PA|IPR002005|Rab GTPase
activator, IPR000632|Yeast Mrs6p protein
(523 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g06540.1 68416.m00758 GDP dissociation inhibitor family prote... 149 6e-36
At3g59920.1 68416.m06687 Rab GDP dissociation inhibitor (GDI2) i... 138 1e-32
At2g44100.1 68415.m05484 Rab GDP dissociation inhibitor (GDI1) i... 134 1e-31
At5g09550.1 68418.m01106 Rab GDP dissociation inhibitor, putativ... 116 3e-26
At1g62580.1 68414.m07060 flavin-containing monooxygenase family ... 32 1.1
At1g57770.1 68414.m06554 amine oxidase family contains similarit... 31 1.4
At5g34581.1 68418.m04037 hydroxyproline-rich glycoprotein family... 31 1.9
At3g56840.1 68416.m06321 FAD-dependent oxidoreductase family pro... 31 2.5
At1g62540.1 68414.m07056 flavin-containing monooxygenase family ... 31 2.5
At1g19250.1 68414.m02395 flavin-containing monooxygenase family ... 31 2.5
At1g32790.1 68414.m04042 RNA-binding protein, putative similar t... 30 3.3
At5g14080.1 68418.m01647 pentatricopeptide (PPR) repeat-containi... 30 4.3
At4g02350.1 68417.m00319 exocyst complex subunit Sec15-like fami... 29 5.7
At1g79580.3 68414.m09279 no apical meristem (NAM) family protein... 29 5.7
At1g79580.2 68414.m09278 no apical meristem (NAM) family protein... 29 5.7
At1g79580.1 68414.m09277 no apical meristem (NAM) family protein... 29 5.7
At1g63340.1 68414.m07160 flavin-containing monooxygenase-related... 29 5.7
At1g12200.1 68414.m01412 flavin-containing monooxygenase family ... 29 5.7
At3g01980.1 68416.m00155 short-chain dehydrogenase/reductase (SD... 29 10.0
At1g62570.1 68414.m07059 flavin-containing monooxygenase family ... 29 10.0
>At3g06540.1 68416.m00758 GDP dissociation inhibitor family protein
/ Rab GTPase activator family protein similar to
SP|P26374 Rab proteins geranylgeranyltransferase
component A 2 (Rab escort protein 2) {Homo sapiens};
contains Pfam profile PF00996: GDP dissociation
inhibitor
Length = 563
Score = 149 bits (360), Expect = 6e-36
Identities = 143/558 (25%), Positives = 249/558 (44%), Gaps = 59/558 (10%)
Query: 7 PTDFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWASYNFEGLQKFIKEVNSD 66
P+++ +IVVGTG+ ES++AAA S G +VLH+D + YG +AS + L F+ +
Sbjct: 12 PSNYDLIVVGTGVSESVLAAAASSSGSSVLHLDPNPFYGSHFASLSLPDLTSFLHSNSVS 71
Query: 67 PDRQKQVYNLSEKWFIEKESAQGETTDENKGEPRKVWS-QADFAAEY-RKFNIDTT-PKL 123
P L + + + + ++ S +++ E+ R+FN+D P++
Sbjct: 72 PPPSPSSPPLPPS--NNHDFISVDLVNRSLYSSVEISSFESEILEEHSRRFNVDLAGPRV 129
Query: 124 LFSRGPLVELLISSNIARYAEFRCVTRVLTW-LNDQLMPVPCSRADVFATEAVGIVEKRM 182
+F + L++ S Y EF+ + + +L VP SRA +F +++ ++EK
Sbjct: 130 VFCADESINLMLKSGANNYVEFKSIDASFVGDSSGELRNVPDSRAAIFKDKSLTLLEKNQ 189
Query: 183 LMK---MLTSIVGYSEEEMNNEFKDWNNKTLK----EYLTHKGLTPNLIHYILYAIA--- 232
LMK ++ S + S E+ ++ + + ++ ++L+ L P + ILYAIA
Sbjct: 190 LMKFFKLVQSHLASSTEKDDSTTVKISEEDMESPFVDFLSKMRLPPKIKSIILYAIAMLD 249
Query: 233 -GGNNSLPCL------EGVKECKKFLMSLGRYGNT--PFLWPMYGSGELPQCFCRLCAVF 283
+N+ C EG+ ++ S+GR+ N ++P+YG GELPQ FCR AV
Sbjct: 250 YDQDNTETCRHLLKTKEGIDRLALYITSMGRFSNALGALIYPIYGQGELPQAFCRRAAVK 309
Query: 284 GGVYCLNRPIDKVETKTVDEGKTVVTIDSK----SKKLNCDHLV-IGV----------HE 328
G +Y L PI + G V + S S+KL D V +G+ +E
Sbjct: 310 GCIYVLRMPITALLLDKETGGYKGVRLASGQEIFSQKLILDPCVTVGLESLSSLTDQQNE 369
Query: 329 CPEELMSSEPAESCDISKAVFVTNGTIMASEKEPLTLLRFPP---LADDDNAVTVLEVGP 385
L+ I++ V V G++ A+ L + +PP + A+ VL++G
Sbjct: 370 TLSVLVPKSMINKEKIARGVCVIRGSVKANVSNALVV--YPPKSLFPEQLTAIRVLQLGS 427
Query: 386 ATGSCPKGLFVVYFIT---------KKTKDAESDL--KPYAERIFDMSGGDQTAATDKPK 434
CP + V+Y T K A S+L P E S + + KP
Sbjct: 428 GLAVCPADMHVLYLSTLCDNDDQGIKALLSAMSNLISLPVPENRQSDSVVENDTSETKPI 487
Query: 435 CLWSLFYNVKDTSSPVSSVVDNVHVCSGPDAGLDFDRAVEQAEQIFKKICPGEEFLPRAP 494
LW Y + + ++ PD L+++ VE A ++++K+ EE
Sbjct: 488 LLWRALYVQELVKGEFGGTISSM---PSPDGNLNYNEIVESAVKLYEKLMGSEELFKEET 544
Query: 495 NPEEIVFEDDVTHGPEFQ 512
+P E E++ G E +
Sbjct: 545 SPAENTTEEENDGGVEIE 562
>At3g59920.1 68416.m06687 Rab GDP dissociation inhibitor (GDI2)
identical to Rab GDP dissociation inhibitor AtGDI2
[Arabidopsis thaliana] GI:2446981
Length = 444
Score = 138 bits (333), Expect = 1e-32
Identities = 109/409 (26%), Positives = 189/409 (46%), Gaps = 38/409 (9%)
Query: 89 GETTDENKGEPRKVWSQADFAAEY----RKFNIDTTPKLLFSRGPLVELLISSNIARYAE 144
GE+T N + K + + A E+ R +N+D PK + G LV LI +++ +Y
Sbjct: 41 GESTSLNLNQLWKKFRGEEKAPEHLGASRDYNVDMMPKFMMGNGKLVRTLIHTDVTKYLS 100
Query: 145 FRCVTRVLTWLNDQLMPVPCSRADVFATEAVGIVEKRMLMKMLTSIVGYSEEE-MNNEFK 203
F+ V ++ ++ VP + + + +GI EKR K + + Y E++ ++
Sbjct: 101 FKAVDGSYVFVKGKVQKVPATPMEALKSSLMGIFEKRRAGKFFSFVQEYDEKDPKTHDGM 160
Query: 204 DWNNKTLKEYLTHKGLTPNLIHYILYAIAGGNNSL----PCLEGVKECKKFLMSLGRY-G 258
D T KE + GL N I +I +A+A N P + V K + SL R+ G
Sbjct: 161 DLTRVTTKELIAKYGLDGNTIDFIGHAVALHTNDQHLDQPAFDTVMRMKLYAESLARFQG 220
Query: 259 NTPFLWPMYGSGELPQCFCRLCAVFGGVYCLNRPIDKVETKTVDEGKTVVTIDSKSKKLN 318
+P+++P+YG GELPQ F RL AV+GG Y LN+P KVE DEG V+ + S+ +
Sbjct: 221 TSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVE---FDEGGKVIGVTSEGETAK 277
Query: 319 CDHLVIGVHECPEELMSSEPAESCDISKAVFVTNGTIMASEKEPLTLLRFP--PLADDDN 376
C +V C + ++ + +++A+ + + I + + P LA +
Sbjct: 278 CKKIV-----CDPSYLPNKVRKIGRVARAIAIMSHPIPNTNDSHSVQVIIPQKQLARKSD 332
Query: 377 AVTVLEVGPATGSCPKGLFVVYFIT-KKTKDAESDLKPYAERIFDMSGGDQTAATDKPKC 435
+ V + PKG F+ + T +T + +++LKP G D D+
Sbjct: 333 -MYVFCCSYSHNVAPKGKFIAFVSTDAETDNPQTELKP---------GTDLLGPVDE--- 379
Query: 436 LWSLFYNVKDTSSPVSS-VVDNVHVCSGPDAGLDFDRAVEQAEQIFKKI 483
+F+++ D PV+ +DN + + DA F+ V ++ I
Sbjct: 380 ---IFFDMYDRYEPVNEPELDNCFISTSYDATTHFETTVADVLNMYTLI 425
Score = 48.8 bits (111), Expect = 9e-06
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 9 DFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWASYNFEGLQKFIKEVNSDPD 68
+++VIV+GTG+ E I++ S G VLHMD +D+YGG S N L K + P+
Sbjct: 4 EYEVIVLGTGLKECILSGLLSVDGVKVLHMDRNDYYGGESTSLNLNQLWKKFRGEEKAPE 63
>At2g44100.1 68415.m05484 Rab GDP dissociation inhibitor (GDI1)
identical to GDP dissociation inhibitor [Arabidopsis
thaliana] GI:1655424
Length = 445
Score = 134 bits (324), Expect = 1e-31
Identities = 103/379 (27%), Positives = 182/379 (48%), Gaps = 30/379 (7%)
Query: 113 RKFNIDTTPKLLFSRGPLVELLISSNIARYAEFRCVTRVLTWLNDQLMPVPCSRADVFAT 172
R +N+D PK + + G LV +LI +++ +Y F+ V ++ ++ VP + + +
Sbjct: 69 RDYNVDMMPKFMMANGKLVRVLIHTDVTKYLSFKAVDGSYVFVQGKVQKVPATPMEALKS 128
Query: 173 EAVGIVEKRMLMKMLTSIVGYSEEE-MNNEFKDWNNKTLKEYLTHKGLTPNLIHYILYAI 231
+GI EKR K + + Y E++ ++ D T K+ + GL + I +I +A+
Sbjct: 129 PLMGIFEKRRAGKFFSYVQEYDEKDPKTHDGMDLRRVTTKDLIAKFGLKEDTIDFIGHAV 188
Query: 232 A--GGNNSL--PCLEGVKECKKFLMSLGRY-GNTPFLWPMYGSGELPQCFCRLCAVFGGV 286
A +N L P + V K + SL R+ G +P+++P+YG GELPQ F RL AV+GG
Sbjct: 189 ALHCNDNHLHQPAYDTVMRMKLYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGT 248
Query: 287 YCLNRPIDKVETKTVDEGKTVVTIDSKSKKLNCDHLVIGVHECPEELMSSEPAESCDISK 346
Y LN+P KVE +EGK V + S+ + C +V C ++++ + +++
Sbjct: 249 YMLNKPECKVEFD--EEGK-VSGVTSEGETAKCKKVV-----CDPSYLTNKVRKIGRVAR 300
Query: 347 AVFVTNGTI-MASEKEPLTLLRFPPLADDDNAVTVLEVGPATGSCPKGLFVVYFITKKTK 405
A+ + + I ++ + + ++ + + V + PKG F+ + T
Sbjct: 301 AIAIMSHPIPNTNDSQSVQVILPQKQLGRKSDMYVFCCSYSHNVAPKGKFIAFVST---- 356
Query: 406 DAESDLKPYAERIFDMSGGDQTAATDKPKCLWSLFYNVKDTSSPVSS-VVDNVHVCSGPD 464
DAE+D P E G D D+ LF+++ D PV+ +DN + + D
Sbjct: 357 DAETD-NPQTEL---QPGIDLLGPVDE------LFFDIYDRYEPVNEPTLDNCFISTSYD 406
Query: 465 AGLDFDRAVEQAEQIFKKI 483
A FD V ++K I
Sbjct: 407 ATTHFDTTVVDVLNMYKLI 425
Score = 48.0 bits (109), Expect = 2e-05
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 9 DFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWASYNFEGLQK 58
+++VIV+GTG+ E I++ S G VLHMD +D+YGG S N L K
Sbjct: 4 EYEVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESTSLNLNQLWK 53
>At5g09550.1 68418.m01106 Rab GDP dissociation inhibitor, putative
strong similarity to GDP dissociation inhibitor protein
OsGDI1 [Oryza sativa] GI:2384758; contains Pfam profile
PF00996: GDP dissociation inhibitor
Length = 365
Score = 116 bits (280), Expect = 3e-26
Identities = 93/367 (25%), Positives = 170/367 (46%), Gaps = 32/367 (8%)
Query: 126 SRGPLVELLISSNIARYAEFRCVTRVLTWLNDQLMPVPCSRADVFATEAVGIVEKRMLMK 185
+ G LV+ LI +++ +Y F+ V + ++ VP + + + +G+ EKR K
Sbjct: 2 ANGLLVQTLIHTDVTKYLNFKAVDGSFVYKKGKIYKVPATDVEALKSPLMGLFEKRRARK 61
Query: 186 MLTSIVGYSEEE-MNNEFKDWNNKTLKEYLTHKGLTPNLIHYILYAIAGGNNS----LPC 240
+ Y E++ ++E D + T +E ++ GL + I +I +A+A N+ P
Sbjct: 62 FFIYVQDYDEKDPKSHEGLDLSKVTAREIISKYGLEDDTIDFIGHALALHNDDDYLDQPA 121
Query: 241 LEGVKECKKFLMSLGRY-GNTPFLWPMYGSGELPQCFCRLCAVFGGVYCLNRPIDKVETK 299
++ VK K + SL R+ G +P+++P+YG GELPQ F RL AV+GG Y LN+P KVE
Sbjct: 122 IDFVKRIKLYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVE-- 179
Query: 300 TVDEGKTVVTIDSKSKKLNCDHLVIGVHECPEELMSSEPAESCDISKAVFVTNGTIM-AS 358
D + + S + C +V C +S + + +++AV + + I +
Sbjct: 180 -FDGSGKAIGVTSAGETAKCKKVV-----CDPSYLSEKVKKVGKVTRAVCIMSHPIPDTN 233
Query: 359 EKEPLTLLRFPPLADDDNAVTVLEVGPATGSCPKGLFVVYFITK-KTKDAESDLKPYAER 417
+ + ++ + + + A PKG ++ + + +T + E +LKP
Sbjct: 234 DAHSVQIILPQKQLGRKSDMYLFCCSYAHNVAPKGKYIAFVSAEAETDNPEEELKP---- 289
Query: 418 IFDMSGGDQTAATDKPKCLWSLFYNVKDTSSPVS-SVVDNVHVCSGPDAGLDFDRAVEQA 476
G + TD+ +FY+ DT P + DN + + DA F+ V
Sbjct: 290 -----GIELLGPTDE------IFYHSYDTYVPTNIQEEDNCFISATYDATTHFESTVVDV 338
Query: 477 EQIFKKI 483
++ KI
Sbjct: 339 LDMYTKI 345
>At1g62580.1 68414.m07060 flavin-containing monooxygenase family
protein / FMO family protein low similarity to
SP|P97501 Dimethylaniline monooxygenase [N-oxide
forming] 3 (EC 1.14.13.8) (Hepatic flavin-containing
monooxygenase 3) (FMO 3) {Mus musculus}; contains Pfam
profile PF00743 Flavin-binding monooxygenase-like
domain
Length = 497
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 8 TDFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWA 49
T V V+G G + A R G +V+ + +H GG+WA
Sbjct: 10 TSNHVAVIGAGAAGLVAARELRREGHSVVVFERGNHIGGVWA 51
>At1g57770.1 68414.m06554 amine oxidase family contains similarity
to carotenoid isomerase [Lycopersicon esculentum]
GI:19550437, phytoene dehydrogenase (PDH1) GI:433144
from (Cercospora nicotianae); contains Pfam profile
PF01593 amine oxidase, flavin-containing
Length = 574
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 12 VIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWASYNFEG 55
V+V+G+G+ A +R ++V+ ++S DH GG S+ +G
Sbjct: 55 VVVIGSGIGGLCCGALLARYDQDVIVLESHDHPGGAAHSFEIKG 98
>At5g34581.1 68418.m04037 hydroxyproline-rich glycoprotein family
protein
Length = 161
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 485 PGEEFLPRAPNPEEIVFEDDVTHGPEFQREQDEEAEPKE 523
P +F+P NP ED G EF+ E EE + +E
Sbjct: 91 PETQFIPNHQNPNNHEEEDGEEDGDEFKEEDGEEVDEEE 129
>At3g56840.1 68416.m06321 FAD-dependent oxidoreductase family
protein contains Pfam profile PF01266 FAD dependent
oxidoreductase
Length = 483
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 13 IVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWASYNFE 54
+V+G G+V VA S G+ VL +D++ +G + +S N E
Sbjct: 83 VVIGAGVVGLAVARELSLRGREVLILDAASSFGTVTSSRNSE 124
>At1g62540.1 68414.m07056 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase GB:AAA21178 GI:349534
from Oryctolagus cuniculus [SP|P32417], SP|P97501 from
Mus musculus; contains Pfam profile PF00743
Flavin-binding monooxygenase-like
Length = 457
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 12 VIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLW 48
V+V+G G + A SR G V+ ++ GGLW
Sbjct: 13 VVVIGAGAAGLVAARELSREGHTVVVLEREKEVGGLW 49
>At1g19250.1 68414.m02395 flavin-containing monooxygenase family
protein / FMO family protein low similarity to
SP|P97501 Dimethylaniline monooxygenase [N-oxide
forming] 3 (EC 1.14.13.8) (Hepatic flavin-containing
monooxygenase 3) (FMO 3) {Mus musculus}; contains Pfam
profile PF00743: Flavin-binding monooxygenase-like
Length = 515
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 8 TDFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWASYNFE 54
T +V ++G G+ S +AAA + + N ++SD GG+W S +E
Sbjct: 9 TSSRVAIIGAGV--SGLAAAKNLVHHNPTVFEASDSVGGVWRSCTYE 53
>At1g32790.1 68414.m04042 RNA-binding protein, putative similar to
RNA-binding protein GB:CAB40027 GI:4539439 from
[Arabidopsis thaliana]
Length = 358
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 451 SSVVDNVHVCSGPDAGLDFDRAVEQAEQIFKKICP-GEEFLPRAPNPE 497
S + +V G D G F R + + +++F K+ P EEF+P + N +
Sbjct: 61 SKIGSHVARSDGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQ 108
>At5g14080.1 68418.m01647 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 634
Score = 29.9 bits (64), Expect = 4.3
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 2 MDEDFPTDFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDH 43
+D D +F V +V TG + +I S++ KN+ D SDH
Sbjct: 341 VDPDSAVEFLVYMVSTGKLPAI--RTLSKLSKNLCRHDKSDH 380
>At4g02350.1 68417.m00319 exocyst complex subunit Sec15-like family
protein contains Pfam profile PF04091: Exocyst complex
subunit Sec15-like
Length = 771
Score = 29.5 bits (63), Expect = 5.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 180 KRMLMKMLTSIVGYSEEEMNNEFKDW 205
KRML + +I Y E ++N EF DW
Sbjct: 187 KRMLENRIPAIRSYVERKVNKEFGDW 212
>At1g79580.3 68414.m09279 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 29.5 bits (63), Expect = 5.7
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 33 KNVLHMDSSDHYGGLWASYNFEGLQKFIKEVNSDPDRQKQVYNLSEKWF 81
+N+L + S+++YGG W+ L K + N + +Q+QV N K F
Sbjct: 281 QNLLRLTSNNNYGGDWSF-----LDKLLTTGNMNQQQQQQVQNHQAKCF 324
>At1g79580.2 68414.m09278 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 29.5 bits (63), Expect = 5.7
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 33 KNVLHMDSSDHYGGLWASYNFEGLQKFIKEVNSDPDRQKQVYNLSEKWF 81
+N+L + S+++YGG W+ L K + N + +Q+QV N K F
Sbjct: 281 QNLLRLTSNNNYGGDWSF-----LDKLLTTGNMNQQQQQQVQNHQAKCF 324
>At1g79580.1 68414.m09277 no apical meristem (NAM) family protein
similar to OsNAC7 protein (GI:6730944) [Oryza sativa];
contains weak hit to Pfam PF02365 : No apical meristem
(NAM) protein
Length = 371
Score = 29.5 bits (63), Expect = 5.7
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 33 KNVLHMDSSDHYGGLWASYNFEGLQKFIKEVNSDPDRQKQVYNLSEKWF 81
+N+L + S+++YGG W+ L K + N + +Q+QV N K F
Sbjct: 281 QNLLRLTSNNNYGGDWSF-----LDKLLTTGNMNQQQQQQVQNHQAKCF 324
>At1g63340.1 68414.m07160 flavin-containing monooxygenase-related
/ FMO-related low similarity to flavin-containing
monooxygenase 2 (FMO2) from Homo sapiens [SP|Q99518]
Length = 398
Score = 29.5 bits (63), Expect = 5.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 8 TDFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWA 49
T V V+G G + A R G +V+ + + GG+WA
Sbjct: 10 TSHHVAVIGAGAAGLVAARELRREGHSVVVFERGNQIGGVWA 51
>At1g12200.1 68414.m01412 flavin-containing monooxygenase family
protein / FMO family protein low similarity to FMO2
from Homo sapiens [SP|Q99518]; contains Pfam profile:
PF00743 Flavin-binding monooxygenase-like
Length = 465
Score = 29.5 bits (63), Expect = 5.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 5 DFPTDFQVIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLWA 49
D T V V+G G + A R G +V+ ++ GG+WA
Sbjct: 7 DPTTSRHVAVIGAGAAGLVAARELRREGHSVVVLERGSQIGGVWA 51
>At3g01980.1 68416.m00155 short-chain dehydrogenase/reductase (SDR)
family protein contains Pfam profiles: PF00106 short
chain dehydrogenase, PF00678 short chain
dehydrogenase/reductase C-terminus
Length = 266
Score = 28.7 bits (61), Expect = 10.0
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 41 SDHYGGLWASYNFEGLQKFIKEVNSDPDRQKQVYNLSEKWFIEKESA 87
S H+ SY ++G + I +V+ D + NL+ WF+ K A
Sbjct: 84 SGHFDAFLNSYTYQGKVQDILQVSQDEFHRITKINLTAPWFLLKAVA 130
>At1g62570.1 68414.m07059 flavin-containing monooxygenase family
protein / FMO family protein low similarity to
flavin-containing monooxygenase FMO3 [Rattus
norvegicus] GI:12006730; contains Pfam profile PF00743:
Flavin-binding monooxygenase-like
Length = 461
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 12 VIVVGTGMVESIVAAACSRIGKNVLHMDSSDHYGGLW 48
V V+G G + A R G V+ +D GGLW
Sbjct: 13 VAVIGAGAAGLVAARELRREGHTVVVLDREKQVGGLW 49
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,744,678
Number of Sequences: 28952
Number of extensions: 622252
Number of successful extensions: 1546
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1523
Number of HSP's gapped (non-prelim): 24
length of query: 523
length of database: 12,070,560
effective HSP length: 84
effective length of query: 439
effective length of database: 9,638,592
effective search space: 4231341888
effective search space used: 4231341888
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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