GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001125-TA|BGIBMGA001125-PA|undefined
         (296 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VQZ3 Cluster: CG15431-PA; n=2; Sophophora|Rep: CG1543...    90   5e-17
UniRef50_UPI0000518448 Cluster: PREDICTED: hypothetical protein;...    39   0.13 
UniRef50_Q4QC74 Cluster: Putative uncharacterized protein; n=3; ...    34   3.8  
UniRef50_Q47SQ1 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  
UniRef50_A4A1J6 Cluster: Probable surface-associated protein csh...    33   6.7  
UniRef50_UPI0000E81A97 Cluster: PREDICTED: hypothetical protein,...    33   8.8  
UniRef50_UPI0000E1FF3D Cluster: PREDICTED: hypothetical protein;...    33   8.8  

>UniRef50_Q9VQZ3 Cluster: CG15431-PA; n=2; Sophophora|Rep:
           CG15431-PA - Drosophila melanogaster (Fruit fly)
          Length = 1026

 Score = 90.2 bits (214), Expect = 5e-17
 Identities = 46/65 (70%), Positives = 52/65 (80%), Gaps = 3/65 (4%)

Query: 17  NSTENSHATERDRVRIEFYATYDVMTGVRIAATLGGFFALMVFLIVYKSRSKS---VKAL 73
           N TE  +A ER R+R EF+ATYDVMTGVRIAATLGGFF LMVFLIV+KSRS S   +K L
Sbjct: 132 NLTEAENAAERARIREEFFATYDVMTGVRIAATLGGFFGLMVFLIVWKSRSSSNETMKVL 191

Query: 74  NDPKI 78
            DPK+
Sbjct: 192 KDPKM 196



 Score = 45.6 bits (103), Expect = 0.002
 Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 4/69 (5%)

Query: 211 ERLAPLASVGSVGPSYAVEC---EIASVGADSVFAEDEPDSTDGEVEQFSTDSGGGEAAA 267
           E+ APLAS+ S   S ++EC   E+ S+  DSVF  + P  TD +++Q S+DS   EAAA
Sbjct: 626 EKRAPLASLSSFKIS-SLECPDSELRSLDEDSVFGLESPADTDDDMQQLSSDSEEQEAAA 684

Query: 268 VGECTELAS 276
                + AS
Sbjct: 685 QAAQAQAAS 693


>UniRef50_UPI0000518448 Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 159

 Score = 39.1 bits (87), Expect = 0.13
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 7/51 (13%)

Query: 214 APLASVGSVGPSYAVECEIASVGADSVF-AEDEPD---STDGEVEQFSTDS 260
           APLAS+GSV P    E +  S+G+DSVF   DE +    T+ EV  FSTDS
Sbjct: 10  APLASMGSVDPP---EADSRSLGSDSVFLRNDEQEECLDTEDEVSGFSTDS 57


>UniRef50_Q4QC74 Cluster: Putative uncharacterized protein; n=3;
            Leishmania|Rep: Putative uncharacterized protein -
            Leishmania major
          Length = 1372

 Score = 34.3 bits (75), Expect = 3.8
 Identities = 21/63 (33%), Positives = 32/63 (50%)

Query: 214  APLASVGSVGPSYAVECEIASVGADSVFAEDEPDSTDGEVEQFSTDSGGGEAAAVGECTE 273
            A  A+  + G S +    ++S GA +  + DE     G+ +     SGGG AAA G+ +E
Sbjct: 1230 AAAAAAATTGSSASSGAGVSSSGAATRVSGDERKKEKGKEQLPRGASGGGAAAAAGDASE 1289

Query: 274  LAS 276
             AS
Sbjct: 1290 SAS 1292


>UniRef50_Q47SQ1 Cluster: Putative uncharacterized protein; n=1;
           Thermobifida fusca YX|Rep: Putative uncharacterized
           protein - Thermobifida fusca (strain YX)
          Length = 540

 Score = 33.5 bits (73), Expect = 6.7
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 2/83 (2%)

Query: 211 ERLAPLASVGSVGPSYAVECEIASVGADSVFAEDEPDSTDGEVEQFSTDSGGGEAAAVGE 270
           +R   LA+  +  P+ A     A+ GAD+  AE    +T+G+ E  +    GG A A G 
Sbjct: 272 DRAPQLAAGAAALPAGAAATAGAAAGADAAEAEGVATATEGDNEGATATESGGRARARGV 331

Query: 271 C--TELASRPVHVPLRLDRASHS 291
                   +    PL LD +S S
Sbjct: 332 AGYGRTPGKAAPPPLNLDGSSKS 354


>UniRef50_A4A1J6 Cluster: Probable surface-associated protein cshA;
           n=1; Blastopirellula marina DSM 3645|Rep: Probable
           surface-associated protein cshA - Blastopirellula marina
           DSM 3645
          Length = 799

 Score = 33.5 bits (73), Expect = 6.7
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 209 PSERLAPLASVGSVG--PSY-AVECEIASVGADSV-FAEDEPDSTDGEVEQFSTDSGGGE 264
           PS    P   +G VG  P+Y      I++VG +S+ FA  +    +G++E +S D G  E
Sbjct: 659 PSTLTPPALGLGFVGRTPAYRGPNDSISNVGENSILFAVSKQPGNEGKLEWYSPDQGWDE 718

Query: 265 AAAV-GECTELASRPVHVPLRLDRASHS 291
             +V G     A++     LR+D  + S
Sbjct: 719 LLSVEGFLFNTATKTGQAFLRIDHDNDS 746


>UniRef50_UPI0000E81A97 Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Gallus gallus|Rep: PREDICTED: hypothetical
           protein, partial - Gallus gallus
          Length = 277

 Score = 33.1 bits (72), Expect = 8.8
 Identities = 37/113 (32%), Positives = 41/113 (36%), Gaps = 9/113 (7%)

Query: 120 EEPPWPRTARFXXXXXXXXXLLTPPR--RLSNLRGDSLPGSALRFVDRRPSAGPRDRRLX 177
           E PP P   R           L PPR  R    +G   P S  R   R P AG   RR  
Sbjct: 158 ESPPAPARHRVPAAAAGGGPRLPPPRRGRPGTAQGRGHPSSPARPGPRWPRAGCCPRRQE 217

Query: 178 XXXXXXXXXXYLERRGSSVVCALQERRLSPCPSERLAPLASVGSVGPSYAVEC 230
                     Y     +SV C   ER LS   S R    A+ GS GP  A+ C
Sbjct: 218 RAVGVKVPRGYW---CASVSCGRNERALS---STRCCLAAATGS-GPLAALTC 263


>UniRef50_UPI0000E1FF3D Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 382

 Score = 33.1 bits (72), Expect = 8.8
 Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 160 LRFVDRRPSAGPR-DRRLXXXXXXXXXXXYLERRGSSVVCALQERRLSPCPSERLA 214
           LR V  RP  GP  +  L           +LERRG +V   L ERR  PCP+  LA
Sbjct: 188 LRGVRGRPCVGPVVEDLLQVLVQAGATPEFLERRGLAVAVWL-ERRRGPCPAAALA 242


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.316    0.133    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,562,771
Number of Sequences: 1657284
Number of extensions: 9353698
Number of successful extensions: 24233
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 24226
Number of HSP's gapped (non-prelim): 10
length of query: 296
length of database: 575,637,011
effective HSP length: 100
effective length of query: 196
effective length of database: 409,908,611
effective search space: 80342087756
effective search space used: 80342087756
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 72 (33.1 bits)