Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001124-TA|BGIBMGA001124-PA|IPR000097|AP endonuclease,
family 1, IPR004808|Exodeoxyribonuclease III xth,
IPR005135|Endonuclease/exonuclease/phosphatase
(632 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 32 0.053
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 31 0.070
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 30 0.16
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 29 0.37
AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein. 27 2.0
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 6.1
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 25 8.0
CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein ... 25 8.0
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 31.9 bits (69), Expect = 0.053
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 503 VKELDKKKPVIICGDMNVSHKEIDLANPKTN-RKNAGFTDEERAGMTQLLGDGFVDTFRH 561
V ELD +P++I GD N ++ + +TN R +A R G+T LG+ T
Sbjct: 104 VAELDGHRPLVIAGDFNA--WAVEWGSKRTNSRGDAVLESFARLGVT--LGN--AGTTPT 157
Query: 562 FHPDQTGSYTFWTYMMNSRSKNVGWRL-DYFIVSD 595
F+ ++ S T+ + S+ + WR+ D +SD
Sbjct: 158 FNRNKRTSIVDITFCSTTLSERLNWRVSDALTLSD 192
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 31.5 bits (68), Expect = 0.070
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 306 VSAESHEEPQDTGEPTTKRRRKPVEEKVNTEDAKKKAPPKNK-STTNYEDIDFTNESK 362
V+ ++ +P ++ + TT+R R KV+ + + + +P K K S T + I +ES+
Sbjct: 1557 VTPVTYAQPSESAKGTTRRERSKQGRKVSDQSSSQTSPSKRKDSVTKRDRIILQDESE 1614
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 30.3 bits (65), Expect = 0.16
Identities = 17/118 (14%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Query: 231 KKKETKSRKNQGKKVAAKEETDDAVREDEPASKKRKVTKKDEKQKXXXXXXXXXXXXXXX 290
+K++ K+R+ G ++EE + R+ + K+ +
Sbjct: 955 RKRKEKARRGSGGDSDSEEEEGEGSRKRKKKGASGGQKKRQKAMDEGLSQKQKGRILSKA 1014
Query: 291 XXXXXXGRRGQKKAEVSAESHEEPQDTGEPTTKRRRKPVEEKVNTEDAKKKAPPKNKS 348
+ ++ A E ++G P TKR+R+ ++ +++ +++++ +++S
Sbjct: 1015 TVSTSESDSDDSRLKI-ASGDESGGESGAPATKRKRRIASDEEDSDGSQRRSRSRSRS 1071
Score = 25.0 bits (52), Expect = 6.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 52 EKKTKRGRKAAGDTNGQDENGKIEETAPKKG 82
++K K R + GD++ ++E G+ KKG
Sbjct: 956 KRKEKARRGSGGDSDSEEEEGEGSRKRKKKG 986
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 29.1 bits (62), Expect = 0.37
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 89 EPPVENKSTDEPSVEDEVAVSEENNPSEDGSETNGHIEEEQ 129
E PV++ P DE+ EDGS H+EEEQ
Sbjct: 44 EAPVDDAEQPLPPNGDELPEDAPEPVPEDGSPDEEHLEEEQ 84
Score = 26.2 bits (55), Expect = 2.6
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 29 AKVVEDPETES-VEAEVDEKNIVSEKKTK-RGRKAAGDTNGQDENGKIEETAPKKGR--K 84
A+V PE S ++ ++DE + + + + NG + E P+ G +
Sbjct: 18 AEVDSVPEVPSDLQQQLDELQLADKPEAPVDDAEQPLPPNGDELPEDAPEPVPEDGSPDE 77
Query: 85 KNVEEPPVENKSTDEPSV-EDEVAVSEENNPSEDGSETNGHIEEEQ 129
+++EE E DE E E SEE++ E+ +EE Q
Sbjct: 78 EHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELEERQ 123
>AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein.
Length = 406
Score = 26.6 bits (56), Expect = 2.0
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 298 RRGQKKAEVSAESHEEPQDTGEPTTKRRRKPVEEKVNTEDAKKKAP 343
+ G+KK + + E+ E + GE + K E++ + +DA P
Sbjct: 347 QEGEKKVKDAQEAEERKKAEGEAAAEEAAKDDEDEDDEDDADNALP 392
Score = 25.4 bits (53), Expect = 4.6
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 41 EAEVDEKNIVSEKKTKRGRKAAGDTNGQDENGKIE-ETAPKKGRKKNVEEPPVENKSTDE 99
+ E +K S K+T+ G K D +E K E E A ++ K + +E ++
Sbjct: 332 DLEEAKKVAASVKETQEGEKKVKDAQEAEERKKAEGEAAAEEAAKDDEDEDDEDDADNAL 391
Query: 100 PSVEDEV 106
P E+
Sbjct: 392 PGEATEL 398
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 25.0 bits (52), Expect = 6.1
Identities = 10/43 (23%), Positives = 25/43 (58%)
Query: 233 KETKSRKNQGKKVAAKEETDDAVREDEPASKKRKVTKKDEKQK 275
+E + R+ + K+ KE+ + RE + K+++ ++ EK++
Sbjct: 475 REQREREQREKEQREKEQREKEERERQQREKEQREREQREKER 517
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 24.6 bits (51), Expect = 8.0
Identities = 13/61 (21%), Positives = 22/61 (36%)
Query: 64 DTNGQDENGKIEETAPKKGRKKNVEEPPVENKSTDEPSVEDEVAVSEENNPSEDGSETNG 123
+ N + K + K ++N P N+STD + S + + G G
Sbjct: 1369 NANRHNRQSKADSLDSPKKHRRNGSCPGPSNESTDGGESMGTASTSSQTDEPRPGGSGGG 1428
Query: 124 H 124
H
Sbjct: 1429 H 1429
>CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein
protein.
Length = 615
Score = 24.6 bits (51), Expect = 8.0
Identities = 34/141 (24%), Positives = 54/141 (38%), Gaps = 1/141 (0%)
Query: 302 KKAEVSAESHEEPQDTGEPTTKRRRKPVEEKVNTEDAKKKAPPKNKSTTNYEDIDFTNES 361
+ A+ ES EE Q + R ++ + +K + + K+ ++T N + N
Sbjct: 55 RNADFDNESSEETQPPNDAGRDRLQQQLLQKSRLKSSNLKSTTYTRNTENDKLTRHLNTV 114
Query: 362 KTTQGKEWNFKIASWNVDGIRAWMSKGGLDYIKYEKPDIFCLQETKCATDKLPDEVANVP 421
K + + K + +G K KPD T+ KLP+ VANV
Sbjct: 115 KFSFDEPVPQKPDNAAAEGAPKPQRKLSDRGEPPPKPDRRITTTTQQIVVKLPETVANVS 174
Query: 422 GYHAYWLAG-DKDGYAGVGIY 441
H AG D+ G G Y
Sbjct: 175 LEHQQSGAGRDEIDCNGNGNY 195
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.308 0.129 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,245
Number of Sequences: 2123
Number of extensions: 25846
Number of successful extensions: 49
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 33
Number of HSP's gapped (non-prelim): 16
length of query: 632
length of database: 516,269
effective HSP length: 68
effective length of query: 564
effective length of database: 371,905
effective search space: 209754420
effective search space used: 209754420
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 51 (24.6 bits)
- SilkBase 1999-2023 -