Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001124-TA|BGIBMGA001124-PA|IPR000097|AP endonuclease,
family 1, IPR004808|Exodeoxyribonuclease III xth,
IPR005135|Endonuclease/exonuclease/phosphatase
(632 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor ... 26 0.68
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 1.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 1.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 1.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 1.6
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 24 2.8
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 23 6.4
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 23 6.4
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 23 6.4
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 23 8.4
>Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor
5-like protein protein.
Length = 162
Score = 26.2 bits (55), Expect = 0.68
Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 44 VDEKNIVSEKKTKRGRKAAGDTNG-----QDENGKIEETAPKKGRKKNVEE 89
V ++ K++KR ++ GDTNG D+N +E + + + + +E
Sbjct: 66 VQGSSLTEGKRSKRSKRPNGDTNGDTSQVDDQNESLEASVNENSKNGDDDE 116
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 25.0 bits (52), Expect = 1.6
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 317 TGEPTTKRRRKPVEE-KVNTEDAKKKAPPKN 346
T E K+ +K +EE K E+AK+KA K+
Sbjct: 1061 TREVAVKKTKKELEEEKKQAEEAKRKAKQKS 1091
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 25.0 bits (52), Expect = 1.6
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 317 TGEPTTKRRRKPVEE-KVNTEDAKKKAPPKN 346
T E K+ +K +EE K E+AK+KA K+
Sbjct: 1061 TREVAVKKTKKELEEEKKQAEEAKRKAKQKS 1091
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 25.0 bits (52), Expect = 1.6
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 317 TGEPTTKRRRKPVEE-KVNTEDAKKKAPPKN 346
T E K+ +K +EE K E+AK+KA K+
Sbjct: 1061 TREVAVKKTKKELEEEKKQAEEAKRKAKQKS 1091
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 25.0 bits (52), Expect = 1.6
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 317 TGEPTTKRRRKPVEE-KVNTEDAKKKAPPKN 346
T E K+ +K +EE K E+AK+KA K+
Sbjct: 1061 TREVAVKKTKKELEEEKKQAEEAKRKAKQKS 1091
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 24.2 bits (50), Expect = 2.8
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 90 PPVENKSTDEPSVEDEVAVSEENNPSEDGSETNGHIEEEQ 129
P V + D+ DEV V ++ ED ++ ++ EE+
Sbjct: 2 PHVSSSGGDDLGSTDEVKVFKDEGDGEDEKRSSENLTEEK 41
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 23.0 bits (47), Expect = 6.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 322 TKRRRKPVEEKVNTEDAKKKAPPKNKSTTNYEDIDFTNESKTT 364
T+RRR + E + + + K +N+ +D FT +S T+
Sbjct: 209 TRRRRIEIAESLRLTERQIKIWFQNRRMKAKKDTKFTEQSVTS 251
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 23.0 bits (47), Expect = 6.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 322 TKRRRKPVEEKVNTEDAKKKAPPKNKSTTNYEDIDFTNESKTT 364
T+RRR + E + + + K +N+ +D FT +S T+
Sbjct: 209 TRRRRIEIAESLRLTERQIKIWFQNRRMKAKKDTKFTEQSVTS 251
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 23.0 bits (47), Expect = 6.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 322 TKRRRKPVEEKVNTEDAKKKAPPKNKSTTNYEDIDFTNESKTT 364
T+RRR + E + + + K +N+ +D FT +S T+
Sbjct: 209 TRRRRIEIAESLRLTERQIKIWFQNRRMKAKKDTKFTEQSVTS 251
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 22.6 bits (46), Expect = 8.4
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 317 TGEPTTKRRRKPVEEKVNTEDAKKKAPPKNKSTTNYEDIDFTNESKTTQGKEWN 370
TGE K RRK KV+ + + + STT + +++ E + + N
Sbjct: 411 TGEQ--KSRRKGPAFKVDPTQVESEEEDEETSTTVFSNVEVVQEEAKKEESDSN 462
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.308 0.129 0.370
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,758
Number of Sequences: 317
Number of extensions: 6266
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 11
length of query: 632
length of database: 114,650
effective HSP length: 61
effective length of query: 571
effective length of database: 95,313
effective search space: 54423723
effective search space used: 54423723
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 46 (22.6 bits)
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