GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001123-TA|BGIBMGA001123-PA|IPR001494|Importin-beta,
N-terminal, IPR013598|Exportin 1-like
         (1004 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22930-3|CAA80515.1|  275|Anopheles gambiae trypsin protein.           27   1.9  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    27   2.5  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    26   5.7  

>Z22930-3|CAA80515.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)

Query: 31  PTVSQDARNQAYNACESFKENSPWCA---QAGLLLASGNQYSPVV 72
           PTV+QD  NQAY+  E   E    CA   Q G     G+   P+V
Sbjct: 192 PTVNQDECNQAYHKSEGITERM-LCAGYQQGGKDACQGDSGGPLV 235


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 27.1 bits (57), Expect = 2.5
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)

Query: 533 VYEGAAPDQR---RSRAVKNVRRHAAGLLVKLGSKYPLLLLPVFGRLHELS 580
           +Y GA PD     R R +  + R    +++K+G+ YP + L +F +L  +S
Sbjct: 317 IYNGAWPDFEEPIRKRLILIIARAQRPMVIKVGNVYP-MTLEMFQKLLNVS 366


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 25.8 bits (54), Expect = 5.7
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 406 AAPLVTWSY-VEQWTQSALDKLESCPRALHTQHPL 439
           A  L+T+S+ V +W+ + L+ LE   R + T+H +
Sbjct: 832 AVALLTYSFGVMKWSNTDLEALERTIRVVSTKHQM 866


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.132    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,987
Number of Sequences: 2123
Number of extensions: 28808
Number of successful extensions: 47
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 46
Number of HSP's gapped (non-prelim): 3
length of query: 1004
length of database: 516,269
effective HSP length: 71
effective length of query: 933
effective length of database: 365,536
effective search space: 341045088
effective search space used: 341045088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 52 (25.0 bits)