Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001122-TA|BGIBMGA001122-PA|IPR002130|Peptidyl-prolyl
cis-trans isomerase, cyclophilin type
         (262 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   6.4  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   6.4  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   8.5  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/25 (28%), Positives = 17/25 (68%)

Query: 4  NKELLKRINLIQRTGRSEQPLTKEL 28
          N+ +LK+ N++  +G  ++ + +EL
Sbjct: 63 NECILKQFNIVDESGNFKENIVQEL 87


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/25 (28%), Positives = 17/25 (68%)

Query: 4  NKELLKRINLIQRTGRSEQPLTKEL 28
          N+ +LK+ N++  +G  ++ + +EL
Sbjct: 63 NECILKQFNIVDESGNFKENIVQEL 87


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 9   KRINLIQRTGRSEQPLTKELEEHWKETKHKLILGASLPFIL 49
           K  N+ Q        + K  E   ++TK+KLI  +   FIL
Sbjct: 167 KNSNIFQLKQHMRDTMNKIAETLDEDTKNKLIEESKTVFIL 207


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.142    0.440 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,613
Number of Sequences: 429
Number of extensions: 3402
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 3
length of query: 262
length of database: 140,377
effective HSP length: 57
effective length of query: 205
effective length of database: 115,924
effective search space: 23764420
effective search space used: 23764420
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)