GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001122-TA|BGIBMGA001122-PA|IPR002130|Peptidyl-prolyl
cis-trans isomerase, cyclophilin type
         (262 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   4.1  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   5.4  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   9.4  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   9.4  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   9.4  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   9.4  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 68  LNVYRTKVSMEVWVVGGSKIGKVTIELFNDI 98
           LN Y+   S+   V+GGSK    T E+ N I
Sbjct: 91  LNRYQETGSIRPGVIGGSKPRVATPEVENRI 121


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)

Query: 76  SMEVWVVGGSKIGKVTIEL 94
           S++ W+ GG+   KVT+ +
Sbjct: 228 SVQSWLSGGASASKVTLSV 246


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)

Query: 89  KVTIELFNDIVPKTCQLF 106
           KVTI+ FNDI   +  LF
Sbjct: 268 KVTIDAFNDIFGWSFLLF 285


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)

Query: 89  KVTIELFNDIVPKTCQLF 106
           KVTI+ FNDI   +  LF
Sbjct: 194 KVTIDAFNDIFGWSFLLF 211


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 45  LPFILFKTEKIDRDIRD 61
           +P IL+    +DRD++D
Sbjct: 348 IPAILYYNYTVDRDLQD 364


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 45  LPFILFKTEKIDRDIRD 61
           +P IL+    +DRD++D
Sbjct: 348 IPAILYYNYTVDRDLQD 364


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 45  LPFILFKTEKIDRDIRD 61
           +P IL+    +DRD++D
Sbjct: 348 IPAILYYNYTVDRDLQD 364


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.142    0.440 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,333
Number of Sequences: 317
Number of extensions: 2980
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 262
length of database: 114,650
effective HSP length: 56
effective length of query: 206
effective length of database: 96,898
effective search space: 19960988
effective search space used: 19960988
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 42 (21.0 bits)