Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001122-TA|BGIBMGA001122-PA|IPR002130|Peptidyl-prolyl
cis-trans isomerase, cyclophilin type
(262 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 107 2e-24
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 86 4e-18
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 85 7e-18
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 78 1e-15
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 77 3e-15
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 66 6e-12
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 59 7e-10
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 49 6e-07
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 31 0.22
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 27 2.8
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 27 2.8
SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces... 27 3.6
SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr... 26 4.8
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 25 8.4
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 107 bits (257), Expect = 2e-24
Identities = 58/156 (37%), Positives = 85/156 (54%), Gaps = 4/156 (2%)
Query: 81 VVGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIK 140
+ G +G++ +LF+D+VPKT F +L G+ G+ YAG+ F R++P +GGD +
Sbjct: 9 IANGQPLGRIVFKLFDDVVPKTAANFRALCTGEK-GYGYAGSTFHRVIPQFMLQGGDFTR 67
Query: 141 DNGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHV 200
NG G G+ P E + LKH PG+LSM + N +QF I P DGKHV
Sbjct: 68 GNGTGGKSIYGEKFPD--ENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHV 125
Query: 201 VFGRIIGGPAQALERISALGLPLGTTTSDCVIRNCG 236
VFG + G ++++ +LG G T + VI CG
Sbjct: 126 VFGEVTEG-MDVVKKVESLGSNSGATRARIVIDKCG 160
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 86.2 bits (204), Expect = 4e-18
Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 3/126 (2%)
Query: 83 GGSKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIKDN 142
G +G+VTI LF VPKT + F +L G+ G Y G+ F R++P+ +GGD+ K +
Sbjct: 36 GDEFLGRVTIGLFGKTVPKTAENFRALATGEK-GFGYEGSIFHRVIPNFMIQGGDITKGD 94
Query: 143 GFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVVF 202
G G G P E ++L H PG+LSM + + +QF I P DG HVVF
Sbjct: 95 GTGGKSIYGSRFPD--ENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVF 152
Query: 203 GRIIGG 208
G ++ G
Sbjct: 153 GEVLSG 158
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 85.4 bits (202), Expect = 7e-18
Identities = 56/154 (36%), Positives = 76/154 (49%), Gaps = 6/154 (3%)
Query: 90 VTIELFNDIVPKTCQLFLSLVRG---DPFGHAYAGTRFFRIVPDLYCRGGDVIKDNGFGC 146
+ ELF+++VPKT + F SL G D Y G+RF R++ + +GGD + NG G
Sbjct: 19 IYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGG 78
Query: 147 YLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVVFGRII 206
G E E + LKH P +LSM + N +QF I P P DGKHVVFG++I
Sbjct: 79 ESIYG--EKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVI 136
Query: 207 GGPAQALERISALGLPLGTTTSDCVIRNCGWFTR 240
G + + I L VI CG T+
Sbjct: 137 QGKS-TVRTIENLETKNDDPVVPVVIEECGTCTK 169
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 77.8 bits (183), Expect = 1e-15
Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 85 SKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIKDNGF 144
+ +GK+ IEL+ + PKTCQ F +L + G+ Y G F R++PD +GGD
Sbjct: 8 TSLGKILIELYTEHAPKTCQNFYTLAKE---GY-YDGVIFHRVIPDFVIQGGDPTGTGRG 63
Query: 145 GCYLPEGQTEPMGVECYR-LKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVVFG 203
G + + + E + L HT G+LSM + N +QF I P P DGKH +FG
Sbjct: 64 GTSIYGDKFDD---EIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFG 120
Query: 204 RIIGG 208
R++ G
Sbjct: 121 RVVSG 125
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 76.6 bits (180), Expect = 3e-15
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 9/140 (6%)
Query: 75 VSMEVWVVGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGH-----AYAGTRFFRIVP 129
V M++ + G +G++ I LF+ IVPKT + F G+ G Y + F RI+
Sbjct: 7 VFMDI-AIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRIIQ 65
Query: 130 DLYCRGGDVIKDNGFG-CYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNII 188
+GGD + +G G + +T P E + LKH PG+LSM + + QF I
Sbjct: 66 GFMIQGGDFVSGDGTGSATIFNSRTFPD--ENFTLKHDRPGLLSMANAGKDSNGCQFFIT 123
Query: 189 FKPLPQFDGKHVVFGRIIGG 208
P DGKHVVFG +I G
Sbjct: 124 TVPCDFLDGKHVVFGEVIEG 143
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 65.7 bits (153), Expect = 6e-12
Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 88 GKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIKDNGFGCY 147
G + IEL+ VPK C+ F+ L G+ Y GT R+VP+ +GGD G G
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCLE---GY-YDGTIVHRVVPEFLIQGGDPT-GTGMGGE 76
Query: 148 LPEGQTEPMGVECY-RLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVVFGRII 206
G EP VE + RL+ G++ M + + +QF I P P+++GK +FGR++
Sbjct: 77 SIYG--EPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
Query: 207 GGPAQALERISALGL 221
G + RIS L L
Sbjct: 135 GDTIYNVVRISELEL 149
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 58.8 bits (136), Expect = 7e-10
Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 10/132 (7%)
Query: 88 GKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIKDNGFGCY 147
G++ IEL D P F+ L + G+ Y T F R + +GGD G G
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLAKQ---GY-YRNTIFHRNIARFMIQGGDP-SGTGRGGQ 339
Query: 148 LPEGQTEPMGVE-CYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVVFGRII 206
G+ P E C LKH G++SM N +QF I++ P D KH +FGR++
Sbjct: 340 SIWGK--PFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVV 397
Query: 207 GG--PAQALERI 216
GG ALE++
Sbjct: 398 GGLNVLDALEKV 409
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 49.2 bits (112), Expect = 6e-07
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 88 GKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIKDNGFGCY 147
G ++I+L+ + PK Q F + G+ Y T F RI+ + +GGD + D G
Sbjct: 464 GDISIKLYPEEAPKAVQNFTTHAEN---GY-YDNTIFHRIIKNFMIQGGDPLGDGTGGES 519
Query: 148 LPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVVFGRIIG 207
+ + E LKH P +SM S N +QF I P DGKH +F R
Sbjct: 520 IWKKDFEDEISP--NLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYA 577
Query: 208 G 208
G
Sbjct: 578 G 578
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 30.7 bits (66), Expect = 0.22
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 87 IGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIKDNGFG 145
+G + I+LF PKTC+ FL L + Y F+ I + C+ GD + G G
Sbjct: 9 VGDLVIDLFVKEAPKTCENFLKLCK----LKYYNFCPFYNIQHNYTCQTGDPLGPTGDG 63
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 110 VRGDPFGHAYAGTRF-FRIVPDLYCRGGDVI 139
V GDP + ++GTRF + I + GGD+I
Sbjct: 75 VDGDPTNNDFSGTRFEYDIYETEFRNGGDII 105
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 27.1 bits (57), Expect = 2.8
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 32 WKETKHKLILGASLPFILFK-TEKIDRDIRDPSFDRPLNVYRTKVSMEVWVV------GG 84
W ETK+ L L + + ++ DP + + +YR +V + +W G
Sbjct: 573 WNETKNDLGRIKDLNLRAGRLAQLLNTRTYDPYIENEMRLYRIRVLLSLWTACCVTDEGK 632
Query: 85 SKIGKVTIELFNDI 98
K K+ +E+F +I
Sbjct: 633 EKNIKIAVEIFREI 646
>SPBC1703.04 |mlh1||MutL family protein Mlh1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 684
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 190 KPLPQFDGKHVVFGRIIGGPAQALERISALGLPLGTTTSDCVIRNCG 236
+PL Q + G II P A++ + L G+T+ D ++++ G
Sbjct: 10 RPLDQLVINKIAAGEIIERPENAIKELIENSLDAGSTSIDVLLKDGG 56
>SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1225
Score = 26.2 bits (55), Expect = 4.8
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 141 DNGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHV 200
+ FG LPEG+ +GV+ + + P + V D + +++ PL V
Sbjct: 619 EESFGTLLPEGKNATLGVQIFTEESEHPFGTANVSLQDLFAATKTGLLWFPLQHAPSGRV 678
Query: 201 VFGRIIGGPAQA-LERIS--ALGLPLG 224
++ PAQ + IS AL P+G
Sbjct: 679 RMS-VMWKPAQLNNDSISSMALATPIG 704
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 25.4 bits (53), Expect = 8.4
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 39 LILGASLPFILFKTEKIDRDIRDPSFDRPLNVYRTKVSMEVWVVGGSKIGKVTIELFN 96
+ILGA + + + +I+ P PL Y+T + E+ I K+T N
Sbjct: 51 IILGAYVNSLFHNNHSVILNIKHPELGEPLKPYQTPLPPELEAPLQLLISKLTQHYIN 108
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.323 0.142 0.440
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,263,941
Number of Sequences: 5004
Number of extensions: 55687
Number of successful extensions: 108
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 83
Number of HSP's gapped (non-prelim): 14
length of query: 262
length of database: 2,362,478
effective HSP length: 71
effective length of query: 191
effective length of database: 2,007,194
effective search space: 383374054
effective search space used: 383374054
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 53 (25.4 bits)
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