Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001122-TA|BGIBMGA001122-PA|IPR002130|Peptidyl-prolyl
cis-trans isomerase, cyclophilin type
(262 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0160 + 1116160-1116678 101 8e-22
09_06_0359 + 22508900-22509439 99 2e-21
10_01_0309 + 3417602-3418147 100 2e-21
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 94 1e-19
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 89 3e-18
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 78 8e-15
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 74 1e-13
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 66 4e-11
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 64 1e-10
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 60 1e-09
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 59 3e-09
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 58 7e-09
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 58 7e-09
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 57 2e-08
06_01_0214 + 1634171-1634173,1634263-1634742 52 6e-07
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 46 2e-05
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 40 0.002
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 39 0.004
01_01_0077 - 585670-585787,585921-586687 39 0.004
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 38 0.006
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 35 0.076
02_01_0086 + 613113-613532 32 0.41
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 32 0.54
08_02_0053 + 11721658-11721689,11721960-11722710 31 0.71
03_01_0466 - 3605909-3606073,3606689-3607004,3607184-3607689 31 0.94
05_07_0171 - 28131533-28131654,28131815-28131908,28132006-281320... 28 6.6
06_03_1074 + 27394124-27394247,27395229-27395305,27395469-273956... 28 8.8
>02_01_0160 + 1116160-1116678
Length = 172
Score = 101 bits (241), Expect = 8e-22
Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 14/172 (8%)
Query: 73 TKVSMEVWVVGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDP-FGHA-----YAGTRFFR 126
T+V ++ VGG+ G++ +EL+ VP+T + F +L G+ G + Y G+ F R
Sbjct: 4 TRVFFDM-TVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHR 62
Query: 127 IVPDLYCRGGDVIKDNGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFN 186
++P+ C+GGD + NG G G E E ++ KH PG+LSM + N +QF
Sbjct: 63 VIPEFMCQGGDFTRGNGTGGESIYG--EKFADEVFKFKHDSPGILSMANAGPNTNGSQFF 120
Query: 187 IIFKPLPQFDGKHVVFGRIIGG--PAQALERISALGLPLGTTTSDCVIRNCG 236
I P DGKHVVFGR++ G +A+E++ + G G+T VI +CG
Sbjct: 121 ICTVPCSWLDGKHVVFGRVVEGMDVVKAIEKVGSRG---GSTAKPVVIADCG 169
>09_06_0359 + 22508900-22509439
Length = 179
Score = 99 bits (238), Expect = 2e-21
Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 74 KVSMEVWVVGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDP-FGHA-----YAGTRFFRI 127
KV ++ ++G ++ G+V +ELF D VPKT + F L G+ G + Y G+ F RI
Sbjct: 7 KVFFDI-LIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRI 65
Query: 128 VPDLYCRGGDVIKDNGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNI 187
+P+ C+GGD + NG G G + E ++L+HT PGVLSM + N +QF I
Sbjct: 66 IPNFMCQGGDFTRGNGTGGESIYG--DRFADENFKLRHTGPGVLSMANAGPNTNGSQFFI 123
Query: 188 IFKPLPQFDGKHVVFGRIIGGPAQALERISALGLPLGTTTSDCVIRNCG 236
DGKHVVFG+++ G +E++ +G G T +I +CG
Sbjct: 124 CTTRTTWLDGKHVVFGKVVDG-YTVVEKMEQVGSGSGGTAERVLIEDCG 171
>10_01_0309 + 3417602-3418147
Length = 181
Score = 99.5 bits (237), Expect = 2e-21
Identities = 59/162 (36%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Query: 82 VGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHA------YAGTRFFRIVPDLYCRG 135
+GG +G+V IEL D VP T + F L G+ G + Y G+ F R+VP C+G
Sbjct: 19 IGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFHRVVPGFMCQG 78
Query: 136 GDVIKDNGFGCYLP-EGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQ 194
GD+ NG G +G E + +KH PGV+SM + N +QF I P
Sbjct: 79 GDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGSQFFITVDKAPW 138
Query: 195 FDGKHVVFGRIIGGPAQALERISALGLPLGTTTSDCVIRNCG 236
DG+HV FGR++ G A+ I G G T VI +CG
Sbjct: 139 LDGRHVAFGRVVAGMG-AVRAIDRTGTWSGKTVKPVVITDCG 179
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 93.9 bits (223), Expect = 1e-19
Identities = 58/170 (34%), Positives = 89/170 (52%), Gaps = 10/170 (5%)
Query: 73 TKVSMEVWVVGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDP-FGHA-----YAGTRFFR 126
TKV ++ + G G++ + LF + VPKT + F ++ G+ G + Y GT F R
Sbjct: 40 TKVFFDI-TINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPFHR 98
Query: 127 IVPDLYCRGGDVIKDNGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFN 186
I+P +GGD + NG GC G P E +++ H+ PG+LSM + + +QF
Sbjct: 99 IIPGFMIQGGDTVSGNGTGCDSIYGGMFPD--ENFKINHSAPGLLSMANYAKDTNGSQFF 156
Query: 187 IIFKPLPQFDGKHVVFGRIIGGPAQALERISALGLPLGTTTSDCVIRNCG 236
I L + DGKHVVFG+++ G + +I A G GT S +I + G
Sbjct: 157 ITTVKLTRLDGKHVVFGKVLSG-MDVVYKIEAEGSQSGTPRSKVLISDSG 205
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 89.4 bits (212), Expect = 3e-18
Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 84 GSKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIKDNG 143
G +G+V I L+ D VP+T + F +L G+ G Y G+ F R++ D +GGD K NG
Sbjct: 96 GKNVGRVVIGLYGDDVPQTAENFRALCTGEK-GFGYKGSSFHRVIKDFMIQGGDFDKGNG 154
Query: 144 FGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVVFG 203
G G+T E ++L HT PGV+SM + N +QF I P DG+HVVFG
Sbjct: 155 TGGKSIYGRT--FKDENFKLVHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDGRHVVFG 212
Query: 204 RIIGG 208
++I G
Sbjct: 213 QVIEG 217
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 77.8 bits (183), Expect = 8e-15
Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 9/161 (5%)
Query: 82 VGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDP----FGHA--YAGTRFFRIVPDLYCRG 135
+ G G+V + LF VPKT + F +L G+ G A + G+ F RI+P +G
Sbjct: 59 IDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSAFHRIIPSFMIQG 118
Query: 136 GDVIKDNGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQF 195
GD +G G G E +++KHT PG+LSM + + +QF I
Sbjct: 119 GDFTLGDGRGGESIYGTK--FADENFKIKHTGPGLLSMANAGRDTNGSQFFITTVTTSWL 176
Query: 196 DGKHVVFGRIIGGPAQALERISALGLPLGTTTSDCVIRNCG 236
DGKHVVFG+++ G + +I A G G+ S VI + G
Sbjct: 177 DGKHVVFGKVLSG-MDVVYKIEAEGQQSGSPKSKVVIADSG 216
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 74.1 bits (174), Expect = 1e-13
Identities = 47/123 (38%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 82 VGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIKD 141
VGG G++ I LF ++VPKT F +L GD G+ Y G F RI+ D +GGD +
Sbjct: 74 VGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDK-GYGYKGCSFHRIIKDFMIQGGDFQNN 132
Query: 142 NGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVV 201
NG G G E E + LKHT PGVLSM + + +QF I F + V
Sbjct: 133 NGTGGRSIYG--ECFDDENFTLKHTGPGVLSMANAGPDTNGSQFFICTVKFSHFKELNQV 190
Query: 202 FGR 204
R
Sbjct: 191 LNR 193
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 65.7 bits (153), Expect = 4e-11
Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 66 RPLNVYRTKVSMEVWVVGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDP----FGHAYAG 121
RP N V +V +G G++ +ELF DIVPKT + F G+ Y G
Sbjct: 30 RPPNPKNPVVFFDV-TIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKG 88
Query: 122 TRFFRIVPDLYCRGGDVIKDNGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVS 176
+F R++ D +GGD +K +G GC G E + KHT PG+LSMV S
Sbjct: 89 CQFHRVIKDFMIQGGDYMKGDGTGCTSIYG--TKFDDENFIAKHTGPGLLSMVRS 141
Score = 35.9 bits (79), Expect = 0.033
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 155 PMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVVFGRIIGGPAQALE 214
P G + L + G++ + + + QF I D KHVVFGR++G A+
Sbjct: 172 PAGFAIFGLGYCF-GIVFCSLYKISNIQFQFFITCAKCEWLDNKHVVFGRVLGDGMLAVR 230
Query: 215 RISALGL-PLGTTTSDCVIRNCG 236
+I + P CVI CG
Sbjct: 231 KIENVATGPNNRPKLACVISECG 253
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 64.1 bits (149), Expect = 1e-10
Identities = 44/124 (35%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 85 SKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIKDNGF 144
+ +G TIE++ PKTC+ FL L R G+ Y F RI+ D +GGD
Sbjct: 16 TSMGAFTIEMYYKHAPKTCRNFLELSRR---GY-YDNVIFHRIIKDFIVQGGDPTGTGRG 71
Query: 145 GCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVVFGR 204
G + + E LKHT G+LSM + N +QF I P DGKH +FGR
Sbjct: 72 GESIYGAKFEDEIRP--ELKHTGAGILSMANAGPNTNGSQFFITLAPCQSLDGKHTIFGR 129
Query: 205 IIGG 208
+ G
Sbjct: 130 VSKG 133
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 60.5 bits (140), Expect = 1e-09
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 29/133 (21%)
Query: 82 VGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDP-FGHA-----YAGTRFFRIVPDLYCRG 135
+ G IG++ I L+ D+VPKT F +L G+ GH Y G+RF RI+P +G
Sbjct: 46 IDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQG 105
Query: 136 GDVIKDNGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQF 195
GD+++ +G G V++M S + +QF I
Sbjct: 106 GDIVRGDGKG-----------------------SVIAMANSGPDSNGSQFYITTIKTSWL 142
Query: 196 DGKHVVFGRIIGG 208
DG+HVVFGR+I G
Sbjct: 143 DGEHVVFGRVIQG 155
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 59.3 bits (137), Expect = 3e-09
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 82 VGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDP-FGHA------YAGTRFFRIVPDLYCR 134
+G ++ ELF D+ P+T + F +L G+ G Y G+ F R++ +
Sbjct: 15 IGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGSLFHRVIKGFMAQ 74
Query: 135 GGDVIKDNGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQ 194
GGD +G G G T E + L+H G+LSM + N +QF I FK +
Sbjct: 75 GGDFSNGDGSGGESIYGGT--FEDENFVLRHDERGLLSMANAGPNTNGSQFFITFKHNSR 132
Query: 195 FDGKHVVFGRIIGGPAQALERISALGLPLGTTTSDCVIR--NCG 236
D K VFG++I G L+RI + + +T +R +CG
Sbjct: 133 LDRKSTVFGKLILG-NDVLKRIEYVDVHGAGSTPVVPVRIVDCG 175
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 58.0 bits (134), Expect = 7e-09
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 88 GKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIKDNGFGCY 147
G + +EL DI P+TC+ FL+ G+ Y G F R + + +GGD G G
Sbjct: 354 GDLNLELHCDITPRTCENFLTHCEN---GY-YNGLIFHRSIKNFMIQGGD---PTGTGSG 406
Query: 148 LPEGQTEPMGVECY-RLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVVFGRII 206
+P E +L H+ GV+SM S + +QF I++K P + KH VFG ++
Sbjct: 407 GESIWGKPFKDELNSKLIHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFGMVV 466
Query: 207 GG--PAQALERI 216
GG A+E++
Sbjct: 467 GGLTTLSAMEKV 478
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 58.0 bits (134), Expect = 7e-09
Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 27/178 (15%)
Query: 82 VGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAG---------------TRF-- 124
+GG G++ +EL+ + P+T + F +L G+ A G TR+
Sbjct: 41 IGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKISLKAASVCTRWTK 100
Query: 125 ----FRIVPDLYCRGGDVIKDNGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNE 180
RIV +GGD+ +G G G E + LKH G+LSM + +
Sbjct: 101 GSCIHRIVKGFMVQGGDITAGDGTGGESIYGLN--FEDENFVLKHERKGMLSMANAGPDT 158
Query: 181 VCAQFNIIFKPLPQFDGKHVVFGRIIG--GPAQALERISALGLPLGTTTSDCVIRNCG 236
+QF I P DGKHVVFGR+I G +++E +S +G +D VI +CG
Sbjct: 159 NGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSMEHVS-VG-ESDRPITDIVIVDCG 214
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 56.8 bits (131), Expect = 2e-08
Identities = 41/116 (35%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 121 GTRFFRIVPDLYCRGGDVIKDNGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNE 180
G+ F R++ +GGD+ +G G G E + LKH G+LSM S N
Sbjct: 119 GSCFHRVIKGFMVQGGDITAGDGTGGESIYGLK--FEDENFVLKHERKGMLSMANSGPNT 176
Query: 181 VCAQFNIIFKPLPQFDGKHVVFGRIIGGPAQALERISALGLPLGTTTSDCVIRNCG 236
+QF I P DGKHVVFGR+I G A TSD I +CG
Sbjct: 177 NGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSVEHAPVGEADRPTSDVEIVDCG 232
Score = 31.9 bits (69), Expect = 0.54
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 82 VGGSKIGKVTIELFNDIVPKTCQLFLSLVRGD 113
+GG G++ IEL+ +VP+T + F +L G+
Sbjct: 34 IGGEIEGRIVIELYASVVPRTAENFRALCTGE 65
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 51.6 bits (118), Expect = 6e-07
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
Query: 85 SKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIKDNGF 144
+ +G + E+F D P+T + FL+L G+ Y GT F R + +GGD G
Sbjct: 7 TNLGDIKCEVFCDQAPRTAENFLALCAS---GY-YDGTIFHRNIKGFMIQGGD---PTGT 59
Query: 145 GCYLPEGQTEPMG---VECYR--LKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKH 199
G +G T G + +R LKH GV+SM S N +QF I + P +G +
Sbjct: 60 G----KGGTSIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQPHLNGHY 115
Query: 200 VVFGRIIGG 208
VF ++I G
Sbjct: 116 TVFAKVIHG 124
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 46.4 bits (105), Expect = 2e-05
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Query: 85 SKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIKDNGF 144
+ +G + + L+ + PKT + F + R G+ Y F R++ + GD + D
Sbjct: 502 TSMGDIHLRLYPEECPKTVENFTTHCRN---GY-YDNLIFHRVIKGFMIQTGDPLGDGTG 557
Query: 145 GCYLPEGQTEPMGVECYR-LKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVVFG 203
G + + E E ++ L+H P LSM + N +QF I P D KH VFG
Sbjct: 558 GQSIWGREFED---EFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFG 614
Query: 204 RIIGG--PAQALERI 216
R++ G Q +E++
Sbjct: 615 RVVKGMDVVQQIEKV 629
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 39.9 bits (89), Expect = 0.002
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 8/124 (6%)
Query: 88 GKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIKDNGFGCY 147
G + F + PKT + LVR G Y FFR+ + V+
Sbjct: 84 GDIEFGFFPHVAPKTVEHIYKLVR---LG-CYNTNHFFRVDKGFVAQVASVVGGRTAPMN 139
Query: 148 LPEGQTEPMGV--ECYRLKHTVPGVLSMVVSSD-NEVCAQFNIIFKPLPQFDGKHVVFGR 204
+ + V E +KH V G+LSM SD N + F+I+ P DG++ VFGR
Sbjct: 140 DEQQEEAEKSVVGEFSTVKH-VRGILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGR 198
Query: 205 IIGG 208
+ G
Sbjct: 199 LTKG 202
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 39.1 bits (87), Expect = 0.004
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 12/138 (8%)
Query: 77 MEVWVVGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGG 136
M V +V + +G + ++L D+ P T + FL L + Y G F ++ D + G
Sbjct: 1 MSVLIV--TSVGDIEVDLHTDMCPLTTKNFLKLCKMK----YYNGCLFHKVEKDFLAQTG 54
Query: 137 DVIKDNGFGC----YLPEGQTEPMGVECYR-LKHTVPGVLSMVVSSDNEVCAQFNIIFK- 190
D G +L Q E L+H+ G ++M + +N +QF I +
Sbjct: 55 DPTGTGAGGDSVYKFLYGDQARFFDDEIRPDLRHSKKGTIAMASAGENCNASQFYITLRD 114
Query: 191 PLPQFDGKHVVFGRIIGG 208
+ D KH VFG + G
Sbjct: 115 DVDYLDDKHTVFGMVAEG 132
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 82 VGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDV 138
+GG G++TI LF D P FLSLV G Y F +IVP GG V
Sbjct: 83 IGGEPAGRITIGLFGDAAPAGASRFLSLVT----GVGYRRKEFVKIVPGYVQHGGVV 135
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 38.3 bits (85), Expect = 0.006
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 8/136 (5%)
Query: 73 TKVSMEVWVVGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLY 132
TK S + V + G +TIE++ D F+SL + + F G F ++ +
Sbjct: 88 TKTSRPSYAVIDTAKGSITIEIYKDASADVVDRFVSLCKSNHF----KGMPFRHVIKNFV 143
Query: 133 CRGGDVIKDNGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPL 192
+GGD + ++ + + G KH ++ + +N+ F I P+
Sbjct: 144 IQGGDFDFNGAAQEWILKAKAS--GENALSPKHEA-FMIGTTKNPNNKGFDLF-ITTAPI 199
Query: 193 PQFDGKHVVFGRIIGG 208
P + K VVFG++I G
Sbjct: 200 PDLNDKLVVFGQVING 215
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 34.7 bits (76), Expect = 0.076
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 82 VGGSKIGKVTIELFNDIVPKTCQLFLSLVRGD 113
+GG ++T ELF D+VPKT + F +L G+
Sbjct: 16 IGGRAAERITFELFADVVPKTTENFRALCTGE 47
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 198 KHVVFGRIIGGPAQALERISALGLPLGTTTSDCVIRNCGWFTRSGQYREGNQ 249
KHVVFG+++ G L+++ A+G G T + I +CG + S +G +
Sbjct: 94 KHVVFGKVVTG-MPLLKKLEAVGSDTGKPTCEVKIVDCGEVSDSQNQLKGEK 144
>02_01_0086 + 613113-613532
Length = 139
Score = 32.3 bits (70), Expect = 0.41
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 92 IELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIKDNGFGCYLPEG 151
+EL+ D+VP T + F +L P H Y G + P ++ G + + +
Sbjct: 1 MELYADLVPLTAENFRALYTKKPL-H-YKGLCLSQHYPRIHVEGRRLRQGPWHRRRVHLR 58
Query: 152 QTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVVFGRIIGG 208
+ P E + L H P + + S++N + +QF F +P FDG +VVFG II G
Sbjct: 59 RHLPN--ENFLLPHDRPWLPNG--SAENNI-SQF---FTRVPWFDGNYVVFGCIISG 107
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 31.9 bits (69), Expect = 0.54
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 9/129 (6%)
Query: 81 VVGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIK 140
VV + G + IEL+ PK + F+ L G+ Y GT F R++ +GGD
Sbjct: 15 VVVQTTAGPLDIELWPKEAPKAVRNFVQLCLE---GY-YDGTLFHRVIKSFLVQGGD--- 67
Query: 141 DNGFGCYLPEGQTEPMGVECY-RLKHTVPGVLSMV-VSSDNEVCAQFNIIFKPLPQFDGK 198
G G P E + RL+ G+++ + + +QF I D K
Sbjct: 68 PTGSGTGGESIYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLDRCDWLDKK 127
Query: 199 HVVFGRIIG 207
+ +FG++ G
Sbjct: 128 NTIFGKVTG 136
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 31.5 bits (68), Expect = 0.71
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 22/139 (15%)
Query: 87 IGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGG--DVIKDNGF 144
+G+V L+ ++P T F + AY GT +++ + G +D G
Sbjct: 127 LGRVIFGLYGRLLPLTTANFKAACTSA----AYRGTLVHKLLQGQFFVAGRQGPRRDRG- 181
Query: 145 GCYLPEG---QTEPMGVECYRLKHTVPGVLSMVVSS---DNEVCAQ---FNIIFK----- 190
P G E + + + LKH PG LS+ + D+++ N+ F
Sbjct: 182 EVQPPTGLVRNAETIDPKAFELKHARPGTLSLCLGQNDDDDDIKLNPNYHNVEFLVTTGP 241
Query: 191 -PLPQFDGKHVVFGRIIGG 208
P P+ DG+++VFG ++ G
Sbjct: 242 GPCPELDGQNIVFGTVLEG 260
>03_01_0466 - 3605909-3606073,3606689-3607004,3607184-3607689
Length = 328
Score = 31.1 bits (67), Expect = 0.94
Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 7/109 (6%)
Query: 62 PSFDRPLNVYRTKVSMEVWVVGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAG 121
PS RPL + T ++ W + + F + + + ++ RG ++
Sbjct: 16 PSHRRPLFLPSTSIASSRWATAARRRSQAVAHQFQASTRRAARRWQAVARGSQAAARWSQ 75
Query: 122 TRFFRIVPDLYCRGGDVIKDNGFGCYLPEGQTEPMGVECYRLKHTVPGV 170
VP + GG+ ++ G G +P G GV + VPGV
Sbjct: 76 AAPVAAVPGVDVTGGEEVE--GSGASVPGGGASAAGV-----RAVVPGV 117
>05_07_0171 -
28131533-28131654,28131815-28131908,28132006-28132086,
28132199-28132247,28132333-28132418,28132660-28132887,
28132969-28133007,28133281-28133343,28133643-28133712,
28133802-28133848,28133925-28133987,28134075-28134125,
28134421-28134485,28134573-28134629,28134779-28134896,
28135494-28135580,28135672-28135751,28136364-28136481
Length = 505
Score = 28.3 bits (60), Expect = 6.6
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 79 VWVVGG--SKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYC--R 134
V V+GG S +GK +V K C L ++ ++ DP+ +A AGT +++
Sbjct: 4 VVVMGGVISGLGKGVTASSIGVVLKACGLRVTSIKIDPYFNADAGTISPHEHGEVFVLDD 63
Query: 135 GGDVIKDNG-FGCYLPEGQTEPMGVECYRLKHTVPGVLSMV 174
GG+V D G + +L T + ++ H +P + + +
Sbjct: 64 GGEVDLDLGNYERFLDIKLTRDHSITAGKIHHVIPHITNEI 104
>06_03_1074 +
27394124-27394247,27395229-27395305,27395469-27395662,
27395779-27395866,27396316-27396603
Length = 256
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 9 KRINLIQRTGRSEQPLTKELEEHWKETKHKLI 40
K I R GRS P +E+ +W++T+ +L+
Sbjct: 119 KNTYTILRCGRSSMPSIEEIFRNWEQTRGRLL 150
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.323 0.142 0.440
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,439,002
Number of Sequences: 37544
Number of extensions: 386183
Number of successful extensions: 672
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 617
Number of HSP's gapped (non-prelim): 33
length of query: 262
length of database: 14,793,348
effective HSP length: 81
effective length of query: 181
effective length of database: 11,752,284
effective search space: 2127163404
effective search space used: 2127163404
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)
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