Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001122-TA|BGIBMGA001122-PA|IPR002130|Peptidyl-prolyl
cis-trans isomerase, cyclophilin type
(262 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 95 5e-20
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 7e-20
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 55 5e-08
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 40 0.002
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 35 0.078
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 35 0.078
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_12261| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_8902| Best HMM Match : DUF1070 (HMM E-Value=0.76) 30 2.2
SB_4714| Best HMM Match : Cuticle_2 (HMM E-Value=5.9) 30 2.2
SB_22892| Best HMM Match : Pkinase (HMM E-Value=0.15) 30 2.2
SB_58543| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11) 29 3.9
SB_8862| Best HMM Match : rve (HMM E-Value=3.3e-12) 28 8.9
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 95.1 bits (226), Expect = 5e-20
Identities = 61/170 (35%), Positives = 86/170 (50%), Gaps = 7/170 (4%)
Query: 70 VYRTKVSMEVW---VVGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFR 126
V R +V+ V+ +G G++ +EL +D+VP T + F L + G Y G+ F R
Sbjct: 130 VSRKRVNPRVFFDITIGERSAGRIVMELRSDVVPMTAENFRCLCTHEK-GFGYKGSSFHR 188
Query: 127 IVPDLYCRGGDVIKDNGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFN 186
I+P C+GGD K NG G G E + LKHT GVLSM S N +QF
Sbjct: 189 IIPQFMCQGGDFTKHNGTGGKSIYGAK--FEDENFVLKHTGAGVLSMANSGPNTNGSQFF 246
Query: 187 IIFKPLPQFDGKHVVFGRIIGGPAQALERISALGLPLGTTTSDCVIRNCG 236
+ + DGKHVVFG +I G + ++ A+G G + VI +CG
Sbjct: 247 LTTEKTDWLDGKHVVFGNVIEG-FDVVRKMEAVGSQSGKASKKVVIDDCG 295
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 94.7 bits (225), Expect = 7e-20
Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 4/151 (2%)
Query: 82 VGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIKD 141
+GG+ G++ +EL +D+VPKT + F +L G+ G Y G+ F R++P C+GGD +
Sbjct: 11 IGGAPAGRIVMELRDDVVPKTAENFRALCTGEK-GFGYKGSSFHRVIPGFMCQGGDFTRG 69
Query: 142 NGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVV 201
+G G G E + LKHT PG+LSM + +QF + DGKHVV
Sbjct: 70 DGTGGKSIYGAK--FADENFNLKHTGPGILSMANAGPGTNGSQFFLCTAKTSWLDGKHVV 127
Query: 202 FGRIIGGPAQALERISALGLPLGTTTSDCVI 232
FG + G +++I +G G T+ VI
Sbjct: 128 FGSVKDG-MDVVKKIEKVGSDSGKTSKKVVI 157
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 70.5 bits (165), Expect = 1e-12
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Query: 75 VSMEVWV---VGGSKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDL 131
V+ +VW+ +GG G+V + LF D PKT F++L + G Y + F R++ +
Sbjct: 24 VTKKVWMDVSIGGQPAGRVILGLFGDTAPKTVANFVALADKEQ-GFGYKDSIFHRVIKNF 82
Query: 132 YCRGGDVIKDNGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKP 191
+GGD +G G Y G+ E + LKH PG L M + N +QF I
Sbjct: 83 MIQGGDFTNKDGTGGYSIYGKY--FDDENFNLKHYGPGWLCMANAGKNTNGSQFYITTIK 140
Query: 192 LPQFDGKHVVFGRIIGG 208
DG H FG+++ G
Sbjct: 141 TSWLDGSHTCFGKVLEG 157
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 55.2 bits (127), Expect = 5e-08
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 116 GHAYAGTRFFRIVPDLYCRGGDVIKDNGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVV 175
G Y + F R++ D +GGD K +G G GQ E ++L+H G LSM
Sbjct: 86 GFGYKNSIFHRVIQDFMIQGGDFTKGDGTGGKSIYGQK--FADENFKLQHYGAGWLSMAN 143
Query: 176 SSDNEVCAQFNIIFKPLPQFDGKHVVFGRIIGG 208
+ + +QF I P DG+HVVFG+++ G
Sbjct: 144 AGKDTNGSQFFITTVKTPWLDGRHVVFGKVLKG 176
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 164 KHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVVFGRIIGGPAQALERISALGLPL 223
+H PG+LSM S N +QF I P P DG+HVVFG+++ G + + A +
Sbjct: 188 EHDKPGLLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKG-MDVVRELEATPVDD 246
Query: 224 GTTTSDCVIRNCG 236
+ S C+I CG
Sbjct: 247 SSPKSPCIIEECG 259
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 163 LKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVVFGRIIGG 208
L+H P +SM + N +QF I P P D KH VFGR++ G
Sbjct: 22 LRHDRPYTVSMANAGPNTNGSQFFITVVPTPWLDNKHTVFGRVVKG 67
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 39.1 bits (87), Expect = 0.004
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 85 SKIGKVTIELFNDIVPKTCQLFLSLVRGDPFGHAYAGTRFFRIVPDLYCRGGDVIKDNGF 144
+ +G++ IEL D P + FL+ V G+ YAGT+F R++P +GG GF
Sbjct: 30 TSLGEIEIELDADKAPISTANFLAYVDS---GY-YAGTQFHRVIPGFMVQGG------GF 79
Query: 145 GCYLPEGQTE-PMGVECYRLKHTVPGVLSMV-VSSDNEVCAQFNIIFKPLPQFD-GK--- 198
+ + T+ P+ E H V G L+M + +QF I K D G
Sbjct: 80 DADMQQKDTQAPIKNEADNGLHNVRGTLAMARTQVRDSATSQFFINHKDNAFLDHGSRDF 139
Query: 199 -HVVFGRIIGG 208
+ VFG+++ G
Sbjct: 140 GYAVFGKVVKG 150
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 34.7 bits (76), Expect = 0.078
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 159 ECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVVFGRIIGG 208
E + + H GV+ M + +QF I +P P D K+V FG++I G
Sbjct: 60 EDFSVAHNRRGVVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQVIEG 109
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 34.7 bits (76), Expect = 0.078
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 157 GVECYRLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVVFGRIIGGPAQALERI 216
G EC+ KH P +LSM N +QF II HVVFG +I G + + +I
Sbjct: 38 GDECFEFKHERPMLLSMANRGPNTNGSQFFII----------HVVFGHVIQG-EELVRQI 86
Query: 217 SALGL-PLGTTTSDCVIRNCG 236
+L +D + NCG
Sbjct: 87 ESLPTNEKNRPNADVKVSNCG 107
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 31.5 bits (68), Expect = 0.72
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 183 AQFNIIFKPLPQFDGKHVVFGRIIGGPAQALERISALGLPLGTTTSDCVIRNCG 236
+QF I DGKHVVFG+++ G + ++ + + T C+I + G
Sbjct: 11 SQFFITTVKTSWLDGKHVVFGKVLEG-MDVVRKLENVNVKGSTPVKTCMIDDSG 63
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 162 RLKHTVPGVLSMVVSSDNEVCAQFNIIFKPLPQFDGKHVVFGRII 206
R H G +SM + N +QF I + P D K+ +FG+ +
Sbjct: 298 RCNHNARGTVSMANNGPNSNGSQFFICYGKQPHLDMKYTMFGKYL 342
>SB_12261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 430
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 157 GVECYRLKHTVPGVLSMVVSSDNE-VCAQFNIIFKPLPQFDGKHVVFGRIIGGPAQALER 215
G+ R + + V+ M V+ E + AQ K ++ G H V ++G A A+++
Sbjct: 169 GISSVRQANQMVRVIGMQVTPSEELIIAQIKRYDKGRTKYTGSHYVLDHVVGMIADAIKK 228
Query: 216 ISALG 220
+A G
Sbjct: 229 CTACG 233
>SB_8902| Best HMM Match : DUF1070 (HMM E-Value=0.76)
Length = 544
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 157 GVECYRLKHTVPGVLSMVVSSDNE-VCAQFNIIFKPLPQFDGKHVVFGRIIGGPAQALER 215
G+ R + + V+ M V+ E + AQ K ++ G H V ++G A A+++
Sbjct: 15 GISSVRQANQMVRVIGMQVTPSEELIIAQIKRYDKGRTKYTGSHYVLDHVVGMIADAIKK 74
Query: 216 ISALG 220
+A G
Sbjct: 75 CTACG 79
>SB_4714| Best HMM Match : Cuticle_2 (HMM E-Value=5.9)
Length = 165
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 157 GVECYRLKHTVPGVLSMVVSSDNE-VCAQFNIIFKPLPQFDGKHVVFGRIIGGPAQALER 215
G+ R + + V+ M V+ E + AQ K ++ G H V ++G A A+++
Sbjct: 13 GISSVRQANQMVRVIGMQVTPSEELIIAQIKRYDKGRTKYTGSHYVLDHVVGMIADAIKK 72
Query: 216 ISALG 220
+A G
Sbjct: 73 CTACG 77
>SB_22892| Best HMM Match : Pkinase (HMM E-Value=0.15)
Length = 120
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 139 IKDNGFGCYLPEGQTEPMGVECYRLKHTVPGVLSMVVSS 177
I D GF C PE Q + C+ L + P VL VS+
Sbjct: 15 IVDFGFACVKPEAQQ--LQTPCFTLSYAAPEVLDQTVSN 51
>SB_58543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 147 YLPEGQTEPMGVECYRLKHTVPGVLSMVVSSD 178
Y E T P+ E Y+++ T+ LS+++SSD
Sbjct: 123 YYEENSTVPLAQEVYKIRVTIFQELSIIISSD 154
>SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11)
Length = 48
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 88 GKVTIELFNDIVPKTCQLFLSLVRGD 113
G+V ELF D VPKT + F +L G+
Sbjct: 2 GRVLFELFADKVPKTAENFRALCTGE 27
>SB_8862| Best HMM Match : rve (HMM E-Value=3.3e-12)
Length = 1358
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 135 GGDVIKDNGFGCY---LPEGQTEPMGVECYRLKHTVPGVLSM 173
GG+ +K G CY L +GQ P+ VE Y ++H V +L +
Sbjct: 430 GGNPLKTVG-KCYIDTLVQGQESPIAVEYYIVEHNVRPILGV 470
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.323 0.142 0.440
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,449,701
Number of Sequences: 59808
Number of extensions: 421172
Number of successful extensions: 665
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 646
Number of HSP's gapped (non-prelim): 19
length of query: 262
length of database: 16,821,457
effective HSP length: 81
effective length of query: 181
effective length of database: 11,977,009
effective search space: 2167838629
effective search space used: 2167838629
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)
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