Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001118-TA|BGIBMGA001118-PA|IPR006434|HAD-superfamily
hydrolase, subfamily IE
(274 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0502 + 24947444-24947665,24947768-24947823,24947929-249480... 124 6e-29
02_04_0052 + 19271014-19271627,19272055-19272224,19272321-192725... 32 0.43
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701... 29 3.1
02_01_0049 + 349105-349164,349359-349403,349566-349692,349946-35... 29 3.1
09_04_0074 - 14336430-14338268 29 4.0
09_01_0175 - 2509014-2509064,2509389-2509490,2509603-2509729,250... 29 4.0
04_01_0619 - 8125611-8127967,8128449-8130123 29 4.0
10_07_0106 - 12933918-12934041,12934164-12934486,12934584-129349... 28 7.1
>03_05_0502 +
24947444-24947665,24947768-24947823,24947929-24948099,
24948508-24948631,24949086-24949142,24949216-24949312,
24949619-24949826,24950637-24950697,24950793-24950846
Length = 349
Score = 124 bits (300), Expect = 6e-29
Identities = 90/290 (31%), Positives = 148/290 (51%), Gaps = 39/290 (13%)
Query: 21 RDETELVAKLNRIIKGGHNKLQIVTDFDHTLTRH-TLDNGKSVLTSFGMFRECPSIPQHY 79
R+ +VA + + + G Q++ DFD TLTR+ + V G + Y
Sbjct: 59 RNPGSVVADADGLARKGLELPQVIADFDGTLTRYWEFERCMCVYVVVGSHGLLRQGNEEY 118
Query: 80 KDEDVRLASIYKPIEADPVMTVEEKTKHMVDWYIAAHALL-------------------- 119
+ L Y PIE P + + EK K M +W+ HALL
Sbjct: 119 DAKREELFEHYHPIEICPDIPLPEKAKLMEEWWEKTHALLIEGGLTYEAIRQSVADAKIT 178
Query: 120 -KKGVKELIIWSQTHEVPVLVFSAGLGESVVAALKAA-NFLLPHVKVVSNFLALDENDKI 177
+ GV +L + + ++PVLVFSAGL + + + + ++KVVSN + +E ++
Sbjct: 179 FRDGVVKLFEFLEERDIPVLVFSAGLADIIEEVFRQKLHRSFKNIKVVSNRMVFNEEGRL 238
Query: 178 VGIKGEVIHTYNKNETAIKN--------------TDYYNLVQQRSNVILMGDNIGDAGMA 223
V KG+ IH NKNE A+ TD Y+LV++R+NV+L+GD+IGD GM+
Sbjct: 239 VSFKGKTIHVLNKNEHALDMAAPVHDNLGDPNGYTDDYSLVKKRTNVLLLGDHIGDLGMS 298
Query: 224 EGMDHCDVVVKVGFLGHSAEGNLPNYKKKFDIVLVNE-PSMDIVNAMVKL 272
+G+++ + + VGFL ++ E +L +Y + FDIV +N+ P + +V + +L
Sbjct: 299 DGLNY-ENRIAVGFLNNNIEKSLKDYSEAFDIVYLNDAPMVGVVELVSEL 347
>02_04_0052 +
19271014-19271627,19272055-19272224,19272321-19272550,
19272657-19272765,19272858-19272985,19273102-19273203,
19273285-19273566,19273660-19273769,19273851-19274145,
19274242-19274475,19274705-19274935,19275167-19275478
Length = 938
Score = 32.3 bits (70), Expect = 0.43
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Query: 127 IIWSQTHEVPVLVFSAGLGESVVA---ALKAANFLLPHVKVVSNFLALDENDKIVGIKGE 183
II +T P+L+ AG+G++ +A AL+ AN +P V ++LD I G K
Sbjct: 298 IICRRTKNNPILLGEAGVGKTAIAEGLALRIANGDVPIYLVAKRIMSLDVGLLIAGAK-- 355
Query: 184 VIHTYNKNETAIKNTDYYNLVQQRSNVILMGDNI 217
+ E + T V++ +VIL D +
Sbjct: 356 -----ERGELESRVTSLIREVREAGDVILFIDEV 384
>06_03_1511 -
30669292-30669401,30669894-30669930,30670012-30670107,
30670186-30670281,30670679-30670828,30670956-30671100,
30671178-30671251,30671325-30671445,30671697-30671821,
30671898-30672047,30672249-30672324,30672496-30672557,
30672597-30672839,30673354-30673683,30673776-30673932,
30674008-30674139,30674219-30674277,30674734-30674798,
30674878-30675094,30675413-30675499,30675655-30675750,
30675938-30676003,30676096-30676287,30676380-30676532,
30676812-30677052,30677322-30677515,30678212-30678348,
30678474-30678480,30678708-30678830,30679370-30679427,
30680018-30680090,30680493-30681765
Length = 1714
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 146 ESVVAALKAANFLLPHVKVVSNFLALDENDKIVGIKGEVIHTYNKNETAIKNTDYYNLVQ 205
ES + + ANF +P + ++ + G V H N ++ DY N+V+
Sbjct: 903 ESFLLVVDGANFSIPELNILMQ--------RYSGACSWVNHANNIVGKLLERNDYDNIVE 954
Query: 206 QRSNVILMGDNIGDAGM 222
+ + ++ G+++G GM
Sbjct: 955 ELTGILKDGESLGVKGM 971
>02_01_0049 +
349105-349164,349359-349403,349566-349692,349946-350049
Length = 111
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/109 (20%), Positives = 43/109 (39%)
Query: 144 LGESVVAALKAANFLLPHVKVVSNFLALDENDKIVGIKGEVIHTYNKNETAIKNTDYYNL 203
+G S V + A+ H + ++ L+E + +I+ Y K T + + N
Sbjct: 3 IGTSAVLSKLASQPGNHHAENSGSYFILEECGGVCHAAQAMIYAYEKEATLEETGNTANK 62
Query: 204 VQQRSNVILMGDNIGDAGMAEGMDHCDVVVKVGFLGHSAEGNLPNYKKK 252
QQ+ V + M ++ + + F G + G + +YK K
Sbjct: 63 EQQQVEVTNLSPIPAGESMILELEAAPIKISTKFAGSAIAGQMDSYKGK 111
>09_04_0074 - 14336430-14338268
Length = 612
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 214 GDNIGDAGMAEGMDHCDVVVKVGFL-GHSAEGNLPNYKKKFDIVLVNEPSMDIVN 267
GD G + +GM DVV + G+S G++ N +K FD + P D+V+
Sbjct: 202 GDLAGARNLFDGMARRDVVTWNSMISGYSRHGDMENARKMFDAM----PERDVVS 252
>09_01_0175 -
2509014-2509064,2509389-2509490,2509603-2509729,
2509852-2511564,2512335-2512424,2512533-2512801,
2513118-2513687,2513703-2514065
Length = 1094
Score = 29.1 bits (62), Expect = 4.0
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
Query: 2 KVLTRLQEIPEFNRENIHIRDETELVAKLNRIIKGGHNKLQIVTDFDHTLTRHTLDNGKS 61
+V+T+L E+ N+ I I+ + + G +K+++V +H L DN +
Sbjct: 679 EVITKLDEVLVENKRTIRIKSD---------VFPGQQDKIKVVDSHNHQLQGAPTDNEEE 729
Query: 62 VLTSFGMFRECPSIPQHYKDEDVRLASIYKPIEADPVMTV--EEKTKHMVDWYIA 114
T+ I +Y ++ RL S IE ++T+ EE K +V +I+
Sbjct: 730 ECTTLIKASHFTPIETNYLNQIRRLES---DIEDASIVTIVREETEKILVTEFIS 781
>04_01_0619 - 8125611-8127967,8128449-8130123
Length = 1343
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 213 MGDNI--GDAGMAEGMDHCDVVVKVGFLGHSAEGNLPNYKKKFDIVLVN 259
+GDN G + +C + +VGF + G LPNY F L+N
Sbjct: 883 IGDNYLQGSLDFLATLSNCQNIWEVGFDLNYFTGELPNYVGNFSSTLIN 931
>10_07_0106 -
12933918-12934041,12934164-12934486,12934584-12934937,
12935029-12935646
Length = 472
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 65 SFGMFRECPSIPQHYKDEDVRLASIYKPIEADPVMTVEEKTKHMVDWYIAAHALLKKG 122
+FG CPS P++ D+ + ++ PV+ E + D +A HA K G
Sbjct: 37 TFGSLAGCPSSPEYPVVPDLDDCVVDTAVDDAPVVAAEAAGRRASDETLAVHAGEKLG 94
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.136 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,707,740
Number of Sequences: 37544
Number of extensions: 315813
Number of successful extensions: 660
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 650
Number of HSP's gapped (non-prelim): 12
length of query: 274
length of database: 14,793,348
effective HSP length: 81
effective length of query: 193
effective length of database: 11,752,284
effective search space: 2268190812
effective search space used: 2268190812
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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