Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001117-TA|BGIBMGA001117-PA|IPR013256|Chromatin SPT2
(605 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1014 - 23586552-23587224,23587402-23587463,23587735-235879... 36 0.093
07_03_1707 + 28866054-28866065,28866185-28866269,28866398-28867149 36 0.12
07_01_0292 - 2117212-2117326,2117402-2117527,2117654-2117791,211... 35 0.16
03_02_0120 - 5728572-5728712,5728812-5728916,5729178-5729441,572... 35 0.16
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 35 0.22
07_01_0463 + 3502708-3503535 35 0.22
05_07_0326 + 29274287-29274428,29274577-29275379 34 0.28
06_03_0136 + 17056256-17056420,17056864-17057036,17057272-170572... 34 0.38
02_05_0583 + 30128795-30129158,30129342-30129505,30129602-301296... 33 0.50
10_08_0161 + 15312986-15313160,15313250-15313557,15313676-153137... 33 0.87
03_02_0030 + 5129234-5129568,5130020-5130651,5130936-5131243,513... 32 1.5
02_05_0227 - 26994462-26994591,26994714-26994803,26994895-269950... 32 1.5
01_06_1577 - 38379951-38380167,38380349-38380543,38380919-383811... 32 1.5
10_02_0023 + 4306350-4306908,4308429-4308814,4308917-4308991,430... 31 2.7
11_06_0284 + 21909758-21913645 31 3.5
02_04_0080 - 19529575-19529643,19529756-19529938,19530061-195302... 31 3.5
02_01_0161 - 1123890-1124210,1124599-1124673,1124841-1124903,112... 31 3.5
12_01_0366 + 2779754-2779882,2780007-2780047,2780163-2780212,278... 30 4.6
07_03_0873 + 22194172-22195434,22195534-22195670,22197531-221976... 30 4.6
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 30 4.6
04_04_0142 - 23084685-23085128 30 4.6
01_06_1430 - 37309737-37309946,37310049-37310100,37310348-373104... 30 4.6
05_03_0035 - 7592177-7592938 30 6.1
05_03_0033 - 7585267-7586028 30 6.1
04_04_0411 - 25014511-25015015,25015098-25015169,25015700-250157... 30 6.1
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 29 8.1
08_02_0584 - 19010345-19010656,19010959-19011018 29 8.1
05_02_0115 - 6758540-6758771,6759417-6759524,6759670-6759840,675... 29 8.1
01_06_1656 + 38946922-38947542,38947640-38947739,38948045-389481... 29 8.1
>08_02_1014 -
23586552-23587224,23587402-23587463,23587735-23587950,
23588125-23588209,23589232-23589389,23589505-23589625,
23590081-23590243,23590330-23590415,23590660-23590742,
23590816-23591677,23593266-23593693
Length = 978
Score = 35.9 bits (79), Expect = 0.093
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 430 DKNSNEKKPSALSRSGDGKYMNGHVQGKSVPKPKEQTVQKNGINGKVPLTKSKVGDSRSE 489
D S+ S +R+ + M + G V + ++ +G NG++ ++SK S
Sbjct: 840 DTGSHSTDSSESTRNSTSEDMERLIFGDQVSY-FDGSMFGHGENGRMTYSRSKSSLGTSS 898
Query: 490 NGKRLPEKDSKRPDDKRLQPSSTKVQNGPSKPKISNSFDFDKHVNSLGKNGARRPDGTRQ 549
+G+ E D RPD+ RLQ + G + + + + L + RR DGT +
Sbjct: 899 SGQ---EVDQYRPDEHRLQGAREGWNQGDESSSLYTNQSKHQFSSKLTEQYRRRLDGT-E 954
Query: 550 YPPGD 554
+ PG+
Sbjct: 955 HDPGE 959
>07_03_1707 + 28866054-28866065,28866185-28866269,28866398-28867149
Length = 282
Score = 35.5 bits (78), Expect = 0.12
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Query: 74 KALRKIQKTLKVIKSANKSVIEDVDRENTAVTLTGPEQPDQDDYGYESQAAAAIYAKMME 133
K +KIQK L +K K + + N V ++G +P++ + +A I
Sbjct: 19 KCCKKIQKVLNKLKDKEKIINIVYENSNNRVIISGHFKPEELAHKLRCKACGVIKDIEFG 78
Query: 134 KYSKIPEEPKFPSSLKSVKKDLNGTRERVKNALQHEDEPVPHKRRRRTENGERE 187
K ++ +E K P K K++ E+ + +E ++ E G++E
Sbjct: 79 KLAEAKKEEKKPDQAK--KEEKKQPEEKKPEEKKKSEEEKKKGDEKKPEEGKKE 130
>07_01_0292 -
2117212-2117326,2117402-2117527,2117654-2117791,
2117904-2118323,2118421-2118591,2118701-2118880,
2118988-2119140,2119226-2119384,2119841-2120152,
2120285-2120452,2120851-2121050,2122207-2122589,
2123244-2123625
Length = 968
Score = 35.1 bits (77), Expect = 0.16
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 471 GINGKVPLTKSKV--GDSRSENGK-RLPEKDSKRPDDKRLQPSSTKVQNGPSKPKISNSF 527
G + +PL +SKV D + + K R P K S+ P + + P T + +S S
Sbjct: 625 GPSDLMPLVRSKVDGSDENTVSAKVRKPRKRSRIPCEDNVLPGDTSNSSPSMNLPLSESI 684
Query: 528 DFDKHVNSLGKNGARRPDGTR 548
D + VN+ N ++P +R
Sbjct: 685 DAEAAVNTTTANSKKKPSRSR 705
>03_02_0120 -
5728572-5728712,5728812-5728916,5729178-5729441,
5729809-5729958,5730070-5730150,5730481-5730597,
5730679-5730831,5731426-5731569,5731773-5731802,
5732070-5732430,5732682-5732849,5733371-5733600,
5734088-5734194,5734275-5734623
Length = 799
Score = 35.1 bits (77), Expect = 0.16
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 81 KTLKVIKSANKSVIEDVDRENTAVTLTGPEQPDQDDYGYESQAAAAIYAKMMEKYSKIPE 140
++L I ++ ++ + V ENTA TL G QP D + + + + A + KY + E
Sbjct: 293 RSLSEILTSEEAAMYSVTAENTAQTLDGETQPGDVDMSAQPEISGSTEADNLAKYVSVRE 352
Query: 141 E 141
E
Sbjct: 353 E 353
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 34.7 bits (76), Expect = 0.22
Identities = 39/167 (23%), Positives = 64/167 (38%), Gaps = 5/167 (2%)
Query: 163 KNALQHEDEPVPHKRR--RRTENGEREPSPPSXXXXXXXXXXXXXXXXPAPPPLDFNQLL 220
+N HE+ H+ ++ ENGE+ A +
Sbjct: 142 ENGENHEENGEKHEENGEKQNENGEKCEENGGKPAQISDDQAVNGCNGSADKKDKEEETE 201
Query: 221 KIAEQKKSEPIEISTKKPVQEAEPERPMTKKQ-KKEYEDXXXXXXXXXXXXXXXKHGGKK 279
K E++K + E + K +E E + TKK +KE E ++ +K
Sbjct: 202 KDNEKEKEDKEEETEKDNEKEKEDKEEETKKDNEKEKEQLMGTDEKEKEKEKEDENEEEK 261
Query: 280 VQKEEKVTHKDEKPSERERKPETSGGLGRIPKIGDRNSNKNINSKPV 326
+++EEK K+EK E+E++ E G K D K N+K V
Sbjct: 262 LEEEEK-KDKEEKLEEKEKENEEENG-NEKDKENDNEIEKVKNTKLV 306
>07_01_0463 + 3502708-3503535
Length = 275
Score = 34.7 bits (76), Expect = 0.22
Identities = 24/108 (22%), Positives = 42/108 (38%)
Query: 408 KTKLSENVKKNIDLKSQNTYRIDKNSNEKKPSALSRSGDGKYMNGHVQGKSVPKPKEQTV 467
+ K S+ D + + + +K EKK + +GK + + K K++
Sbjct: 84 ENKKSDKKDDEHDDEDEEGKKKEKEMKEKKKDKSDKKEEGKKKKDGDEEEGKKKEKKKDK 143
Query: 468 QKNGINGKVPLTKSKVGDSRSENGKRLPEKDSKRPDDKRLQPSSTKVQ 515
+ GK K K GD E K+ +K K +K P+ K +
Sbjct: 144 DGDEKEGKKEKKKDKDGDEEEEGKKKEKKKKDKGDKEKTNDPAKLKAK 191
Score = 31.1 bits (67), Expect = 2.7
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 413 ENVKKNIDLKSQNTYRIDKNSNEKKPSALSRSGDGKYMNGHVQGKSVPKPKEQTVQKNGI 472
E VK + D +++ + K+S + K + S D ++ + +GK K KE +K
Sbjct: 60 EEVKLDSDDGAKSAVK-SKDSKKDKENKKSDKKDDEHDDEDEEGKK--KEKEMKEKKKDK 116
Query: 473 NGKVPLTKSKVGDSRSENGKRLPEKDSKRPDDKRLQPSSTKVQNG 517
+ K K K D E GK+ +K K D+K + K ++G
Sbjct: 117 SDKKEEGKKKK-DGDEEEGKKKEKKKDKDGDEKEGKKEKKKDKDG 160
>05_07_0326 + 29274287-29274428,29274577-29275379
Length = 314
Score = 34.3 bits (75), Expect = 0.28
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 7/104 (6%)
Query: 210 APPPLDFNQLLKIAEQKKSEPI----EISTKKPVQEAEPERPMTKKQKK-EYEDXXXXXX 264
AP P ++ + A K EP E KK Q+ E E KKQ++ + E+
Sbjct: 119 APAPTSVQEIKQKAPTAKQEPQPQFDEAPNKKKQQQEEEEEAAKKKQQQLQEEEEATKKK 178
Query: 265 XXXXXXXXXKHGGKKVQKEEKVT-HKDEKPSERER-KPETSGGL 306
KK+Q+EE + HK +ER++ +P T+ L
Sbjct: 179 QQEEEEEAAAKKTKKLQEEEAIAKHKPATTTERKQAEPTTAAPL 222
>06_03_0136 +
17056256-17056420,17056864-17057036,17057272-17057297,
17057524-17057922,17058190-17058265,17058432-17058507,
17058930-17059013,17059446-17059570,17060146-17060389,
17060968-17061031,17061218-17061726
Length = 646
Score = 33.9 bits (74), Expect = 0.38
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 429 IDKNSNEKKPSALSRSGDG----KYMNGHV--QGKSVPKPKEQTVQKNGINGKVPLTKSK 482
+D +E KPS ++ GD +Y G + QG+ P K++TV+ GING +P +
Sbjct: 477 LDVVDDEDKPSGITIFGDEDPKEEYEEGELPDQGEPSPPRKKKTVEFPGINGPIPENGDR 536
Query: 483 -VGDSR-SENGKRLPEKDSKRPDDK 505
+ DS + +R DS+ D+
Sbjct: 537 WLWDSTPPQYSERYHSSDSREERDR 561
>02_05_0583 +
30128795-30129158,30129342-30129505,30129602-30129665,
30130082-30130215,30130369-30130452,30130580-30130654,
30130734-30130805,30130892-30130965,30131217-30131269,
30131388-30131497,30131824-30131892,30131975-30132049,
30132449-30132508,30132555-30132647,30132718-30132797,
30132877-30132976,30133153-30133590
Length = 702
Score = 33.5 bits (73), Expect = 0.50
Identities = 19/108 (17%), Positives = 44/108 (40%)
Query: 223 AEQKKSEPIEISTKKPVQEAEPERPMTKKQKKEYEDXXXXXXXXXXXXXXXKHGGKKVQK 282
++ + +PI+ K V+ E + K+ K++
Sbjct: 586 SDDPQKQPIQSKKHKDVKTTNEETSILDGVTKDKRQTHETLKNHKKGKKRNGPESTKIKG 645
Query: 283 EEKVTHKDEKPSERERKPETSGGLGRIPKIGDRNSNKNINSKPVEREK 330
++K TH +E+P+ +++P ++ +PK N K +++ E+ K
Sbjct: 646 DQKETHNEEEPTSEKKQPVSAKIKKSVPKRISGNKGKKLDTGKGEKRK 693
>10_08_0161 +
15312986-15313160,15313250-15313557,15313676-15313754,
15313856-15314373
Length = 359
Score = 32.7 bits (71), Expect = 0.87
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 229 EPIEISTKKPVQEAEPER-PMTKKQKKEYEDXXXXXXXXXXXXXXXKHGGKKVQKEEKVT 287
E IE TKK VQ P KK K+E +D K GG +K EK
Sbjct: 85 ERIEARTKKAVQIVSAGAGPPPKKDKEEKKDKDKKGGGDDKKAEKEKGGGGGDKKAEKEK 144
Query: 288 HKDEKPSERERKPE 301
+KP E ++ E
Sbjct: 145 GGGDKPKEEKKAKE 158
>03_02_0030 +
5129234-5129568,5130020-5130651,5130936-5131243,
5131396-5131504,5131871-5131956,5132173-5132232,
5133164-5133340,5133742-5133780
Length = 581
Score = 31.9 bits (69), Expect = 1.5
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 97 VDRENTAVTLTGPEQPDQDDYGYESQAAAAIYAKMMEKYSKIPEEPKFPSSLKSVKKDLN 156
+D E++ T TG + D Y+S ++ A + K +P F + K + +
Sbjct: 265 IDEEDSTSTATGASKSQTDYEDYKSGKDVSLGALLKTKDGALP--LAFDDYVLGDKSEES 322
Query: 157 GTRERVKNALQHEDEPVPHKRRRRTENGER 186
GT+ NA + P + R+ +GE+
Sbjct: 323 GTKHNTNNAKNNVLGASPSSKSSRSPSGEK 352
>02_05_0227 -
26994462-26994591,26994714-26994803,26994895-26995022,
26995179-26995573,26995666-26995792,26995909-26995986,
26996096-26996198,26996315-26996589,26996700-26996726
Length = 450
Score = 31.9 bits (69), Expect = 1.5
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 24/185 (12%)
Query: 426 TYRIDKNSNEKKPSALSRSGDGKYMNGHVQGKSVPKPKEQTVQKNGINGK-VPLTKSKVG 484
T ++ K+S K PS SR G + GK ++T+ + NG +P K
Sbjct: 218 TDKVSKDSGLKGPSIQSRVG--------LVGKEPHPNTKRTIASSAKNGSSLPAMKKIQR 269
Query: 485 DSRSENGKRLPEK-DSKRPDDKRLQPSSTK-VQNGPSKPKISNSFDFDKHVNSLGKNGAR 542
S NG+++ + SKRP Q + +Q+ KP + N +F + V++
Sbjct: 270 VQPSSNGQKMQQTLQSKRPQAMLSQSHGQQSLQSRKPKPSL-NGQNFRQKVSAPLAQKHL 328
Query: 543 RPDGTRQYPPGDVRRKPQGKPKRRTXXXXXXXXXXXXXFIDDG--DEQMDYSKHIKEIFG 600
P + P GK K R +DG +E++DY I+ +F
Sbjct: 329 APSSRPK--PSSAVHNDHGKGKTRRLVKRKSK--------EDGCDEEEVDYKSIIRGMFN 378
Query: 601 YDKSK 605
Y+ +K
Sbjct: 379 YNPAK 383
>01_06_1577 -
38379951-38380167,38380349-38380543,38380919-38381191,
38381281-38381455,38381925-38382035,38382120-38382390,
38382990-38383139,38383242-38384246
Length = 798
Score = 31.9 bits (69), Expect = 1.5
Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 1/126 (0%)
Query: 423 SQNTYRIDKNSNEKKPSALSRSGDGKYMNGHVQGKSVPKPKEQTVQKNGINGKVPLTKSK 482
S+NT S+E+K + + K GK+ ++ +G+ +K+
Sbjct: 105 SENTVEKPVESSEEKAPPKEKE-ESKDTFDDANGKTEQSSAKEDGDSESGSGQSDGSKNG 163
Query: 483 VGDSRSENGKRLPEKDSKRPDDKRLQPSSTKVQNGPSKPKISNSFDFDKHVNSLGKNGAR 542
+ +SE K + D +R DD+ + + ++ +P+I + D K+
Sbjct: 164 DDEEKSEEKKDDEQSDGERKDDQEEKAEGSGSKDTTDQPQIEETVDESGEKGQGAKSNEV 223
Query: 543 RPDGTR 548
PDG +
Sbjct: 224 FPDGAQ 229
>10_02_0023 +
4306350-4306908,4308429-4308814,4308917-4308991,
4309330-4309539,4309649-4309961,4310035-4310130,
4310220-4310357,4310436-4310536,4310645-4310712,
4310800-4310849,4311790-4311848,4312399-4312530
Length = 728
Score = 31.1 bits (67), Expect = 2.7
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 408 KTKLSENVKKNIDLK--SQNTYRIDKNSNEKKPSALSRSGDGKYMNGHVQGKSVPKPKEQ 465
K + E + K LK + ++ + + P + S GK G Q S+ + +
Sbjct: 451 KDQTDETIVKKSQLKLLKGDESKLPSKDDVEVPQTSTHS-KGKAKVGKRQNTSIDERPSK 509
Query: 466 TVQKNGINGKVPLTKSKVGDSRSENGKRLP-EKDSKRPDDKRLQPSSTKVQNGPSKPKIS 524
+++G + + +VG S+S++ P +K SK DD +L PS Q+G +P+ S
Sbjct: 510 KSRESGESKLTSQDEGEVGKSKSKSVNERPLKKASKNRDDVKL-PS----QSGLEEPQTS 564
Query: 525 N 525
N
Sbjct: 565 N 565
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 30.7 bits (66), Expect = 3.5
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 231 IEISTKKPVQEAEPERPMTKKQKKEYEDXXXXXXXXXXXXXXXKHGGKKVQKEEKVTHKD 290
+E TK+ + E E+ +++ E E K GG++ +KEE+ K
Sbjct: 424 VEEITKQGGERKEEEKNEGEEENGEEEGKEKELKGRKDKEKKEK-GGREERKEEEHHEKQ 482
Query: 291 EKPSERERKPE 301
EK E ERK E
Sbjct: 483 EKEKEEERKEE 493
>02_04_0080 -
19529575-19529643,19529756-19529938,19530061-19530210,
19530297-19530379,19530497-19530599,19530709-19530918,
19531023-19531183,19531275-19531351,19531483-19531610,
19531695-19531935,19532047-19532180,19532261-19532435,
19532587-19532656,19532746-19532803,19532887-19532994,
19533088-19533283,19533381-19533727,19534008-19534034,
19534334-19534336
Length = 840
Score = 30.7 bits (66), Expect = 3.5
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 455 QGKSVPKPKEQTVQKNGING-KVPLTKSKVGDSRSENGKRLPEKDSK-RPDDKRLQPSST 512
+GK+ PK K++T K G + P K D+ +G++ P K+ K + ++ L +T
Sbjct: 25 EGKAAPK-KQKTESKEQEGGQQAPSKNKKTADNEEHDGEQEPSKNKKLKAEESDLNGKAT 83
Query: 513 KVQ 515
V+
Sbjct: 84 AVK 86
>02_01_0161 -
1123890-1124210,1124599-1124673,1124841-1124903,
1125020-1125358
Length = 265
Score = 30.7 bits (66), Expect = 3.5
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 159 RERVKNALQHEDEPVPHKRRRRTENGEREPSPPS 192
R R + +Q E+ P RR RT GE++P+PP+
Sbjct: 35 RRRRRRRVQREEIPSWGCRRPRTTPGEKKPAPPA 68
>12_01_0366 +
2779754-2779882,2780007-2780047,2780163-2780212,
2780824-2780968,2781298-2781354,2781448-2781571,
2781798-2782259,2782493-2782564
Length = 359
Score = 30.3 bits (65), Expect = 4.6
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 120 ESQAAAAIYAKMMEKYSKIPEEPKFPSS 147
+ A A ++ +++ Y+K+P +PK PS+
Sbjct: 112 DCDAVAGVFGRILNAYAKVPPKPKVPST 139
>07_03_0873 +
22194172-22195434,22195534-22195670,22197531-22197639,
22197739-22197865,22197952-22198012,22199332-22199722
Length = 695
Score = 30.3 bits (65), Expect = 4.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 167 QHEDEPVPHKRRRRTENGEREPSPP 191
+ E P P +RRRR + G+R SPP
Sbjct: 260 EEEGTPAPPRRRRRRKAGDRGDSPP 284
>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 30.3 bits (65), Expect = 4.6
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 74 KALRKIQKTLKVIKSANKSVIEDVDRENTAVTLTGPEQPDQDDYGYESQAAAAIYAKMME 133
+A+ K+++ + V KS + I ++R+ T L E+ Q ++ A+ KM E
Sbjct: 1562 EAIAKLEEQMNVDKSEKELHISKLERQITLSELKYMEEI-QTMQVETTEKDEALTTKMQE 1620
Query: 134 KYSKIPEEPKFPSSLKSVKKDLNGTRERVKN 164
+ + E+ L V+K+LN + N
Sbjct: 1621 HANLVHEKDALEQQLLEVRKELNDAYHTIAN 1651
>04_04_0142 - 23084685-23085128
Length = 147
Score = 30.3 bits (65), Expect = 4.6
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 276 GGKKVQKEEKVTHKDEKPSERERK-PETSGGLGRIPKIGDR 315
GGK V+++E K++K E+E K P GG G K+ R
Sbjct: 58 GGKVVEEKEVKAAKEKKEKEKEAKVPRGEGGNGEEKKVAVR 98
>01_06_1430 -
37309737-37309946,37310049-37310100,37310348-37310427,
37310538-37310606,37310710-37310843,37311173-37311332,
37311483-37311554,37312113-37312246,37312386-37312521,
37313273-37313416
Length = 396
Score = 30.3 bits (65), Expect = 4.6
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 213 PLDFNQLLKIAEQKKSEPIEISTKKPVQEAEPERPMTKKQKKEYED 258
P DF Q+ K + K S+ + + +KPV+E+ PE K E E+
Sbjct: 154 PSDFLQMFKDVQSKVSDVV-LGKEKPVEESSPEYEKLKNYIFELEN 198
>05_03_0035 - 7592177-7592938
Length = 253
Score = 29.9 bits (64), Expect = 6.1
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 8/139 (5%)
Query: 430 DKNSN-EKKPSALSRSGDGKYMNGHVQGKSVPKPKEQTVQKNGINGKVPLTKSKVGDSRS 488
+K+S E KP++ Y K PKP+ + + + K P T S +S+
Sbjct: 52 EKSSEPEAKPASQQEPKSDSYSQAKPGPKDEPKPEPEAMSASQPESK-PATYS---ESKP 107
Query: 489 ENGKRLPEKDSKRPDDKRLQPSSTKVQNGPSKPKISNSFDFDKHVNSLGKNGARRPDGTR 548
E+ K PE + + QP + KPK S + K P+ T+
Sbjct: 108 ES-KAEPESKPEPKAESTPQPEAKSEPKSEPKPK-SEPYAEPKSEPKSEPQSEPNPE-TK 164
Query: 549 QYPPGDVRRKPQGKPKRRT 567
P + + +P+ +P +T
Sbjct: 165 AEPKSEPKYEPKSEPTPQT 183
>05_03_0033 - 7585267-7586028
Length = 253
Score = 29.9 bits (64), Expect = 6.1
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 8/139 (5%)
Query: 430 DKNSN-EKKPSALSRSGDGKYMNGHVQGKSVPKPKEQTVQKNGINGKVPLTKSKVGDSRS 488
+K+S E KP++ Y K PKP+ + + + K P T S +S+
Sbjct: 52 EKSSEPEAKPASQQEPKSDSYSQAKPGPKDEPKPEPEAMSASQPESK-PATYS---ESKP 107
Query: 489 ENGKRLPEKDSKRPDDKRLQPSSTKVQNGPSKPKISNSFDFDKHVNSLGKNGARRPDGTR 548
E+ K PE + + QP + KPK S + K P+ T+
Sbjct: 108 ES-KAEPESKPEPKAESTPQPEAKSEPKSEPKPK-SELYAEPKSEPKSEPQSEPNPE-TK 164
Query: 549 QYPPGDVRRKPQGKPKRRT 567
P + + +P+ +P +T
Sbjct: 165 AEPKSEPKSEPKSEPTPQT 183
>04_04_0411 -
25014511-25015015,25015098-25015169,25015700-25015734,
25015805-25015873,25015993-25016044,25016444-25016526,
25016625-25016726,25017150-25017884,25017962-25018012,
25018792-25018983,25019066-25019216,25020012-25020193,
25020329-25020532,25020752-25020859
Length = 846
Score = 29.9 bits (64), Expect = 6.1
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 414 NVKKNIDLKSQNTYRIDKNSNEKKPSALSRSGD--GKYMNGHVQGKSV---PKPKEQTVQ 468
N ++I + + + D N+ P +R+ D K+++ GK P + +
Sbjct: 406 NNNEDILVSRELSPETDDGDNKLPPETGNRAADDKSKHVDNTPAGKGKRGRPPASKSHEK 465
Query: 469 KNGINGKVPLTKSKVGDSRSENGKRLPEKDSKRPDDKRLQPSSTKVQNGPSKPK 522
KN GKV +SK D+ S++G R + +K D ++ S K G S K
Sbjct: 466 KNVGKGKVSGLESKKADAVSDSGGRATRRLAK---DDDIKSSFKKTGEGESSKK 516
>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 29.5 bits (63), Expect = 8.1
Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 10/124 (8%)
Query: 478 LTKSKVGDSRSENGKR-LPEKDSKRPDDKRLQPSSTKVQNGPSKPKISNSFDFDKHVNSL 536
+T SK+ D R G LP + +D QP T+ + P + + + D + + +
Sbjct: 1678 ITPSKLEDVRDALGATPLPPRRYPTAEDTSRQP--TRTASTPIEKAVPDGRDAIRELKIV 1735
Query: 537 GKNGARRPDGTRQYPPGDVRRKPQGKPKRRTXXXXXXXXXXXXXFIDDGDEQMDYSKHIK 596
+R P DVRR P PK+ + D+ D + K +
Sbjct: 1736 DSTSSREQ-------PSDVRRAPASLPKQEAADSYSTTVPFQRSYPDNEDTKEPRDKPKE 1788
Query: 597 EIFG 600
++ G
Sbjct: 1789 KVSG 1792
>08_02_0584 - 19010345-19010656,19010959-19011018
Length = 123
Score = 29.5 bits (63), Expect = 8.1
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 453 HVQGKSVPKPKEQTVQKNGINGKVPLTKSKVGDSRSENGKRLPEKDSKRPDDKRLQPSST 512
H + K K++ +KNG P + K + E GK EK + D +L+
Sbjct: 22 HAKEAKPEKEKKEKKEKNGEEAAKPAKEKKEKKEKKEKGKEKKEKVEETTDVAKLRAKLE 81
Query: 513 KV 514
K+
Sbjct: 82 KL 83
>05_02_0115 - 6758540-6758771,6759417-6759524,6759670-6759840,
6759967-6760077,6760562-6760663,6761139-6761366,
6761568-6761696,6761753-6761869,6761955-6762301,
6762377-6762931,6763104-6763182,6763429-6763595,
6763857-6764075,6764956-6765139,6765175-6765371,
6765717-6766035,6766379-6766538,6767642-6767794,
6767911-6768013
Length = 1226
Score = 29.5 bits (63), Expect = 8.1
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 6/99 (6%)
Query: 408 KTKLSENVKKNIDLKSQNTYRIDKNSNEKKPSALSRS------GDGKYMNGHVQGKSVPK 461
+TK+ E +L +Q + +++ + KP R Y + GKS +
Sbjct: 952 RTKVPEAPLSAQELATQTDQMLGEHNCDPKPETTRRRRKRQNVSHASYEDNTTDGKSSDE 1011
Query: 462 PKEQTVQKNGINGKVPLTKSKVGDSRSENGKRLPEKDSK 500
Q ++ N KVPL S+ ++G P+ D +
Sbjct: 1012 ETLQAIKSRTKNKKVPLVGFSPSTSQHQDGLADPDSDDE 1050
>01_06_1656 +
38946922-38947542,38947640-38947739,38948045-38948189,
38948868-38948991,38949443-38949960,38950111-38950458,
38950557-38950638,38951309-38951707,38951790-38951927,
38952063-38952108,38952200-38952369
Length = 896
Score = 29.5 bits (63), Expect = 8.1
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 214 LDFNQLLK--IAEQKKSEPIEISTKKPVQEAEPERP-MTKKQKKEYEDXXXXXXXXXXXX 270
+D +QL K +K ++ + +K +++ E E M K+QKK+ E+
Sbjct: 318 VDDSQLQKNTSTNEKDTQKAQKQVEKELKQKEKEEARMRKQQKKQQEEALREQKRREKEE 377
Query: 271 XXXKHGGKK----VQKEEKVTHKDEKPSERERKPE 301
K +K QKE+K K+E + +++K +
Sbjct: 378 AEMKKQQRKQEEEAQKEQKRREKEEAETRKQQKKQ 412
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.307 0.128 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,566,269
Number of Sequences: 37544
Number of extensions: 661686
Number of successful extensions: 1824
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1783
Number of HSP's gapped (non-prelim): 64
length of query: 605
length of database: 14,793,348
effective HSP length: 86
effective length of query: 519
effective length of database: 11,564,564
effective search space: 6002008716
effective search space used: 6002008716
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 63 (29.5 bits)
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