Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001116-TA|BGIBMGA001116-PA|undefined
(450 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75712-2|CAB00041.1| 254|Caenorhabditis elegans Hypothetical pr... 32 0.95
AL132898-12|CAB60945.3| 576|Caenorhabditis elegans Hypothetical... 30 3.8
AC006633-6|AAK68378.4| 578|Caenorhabditis elegans Hypothetical ... 29 5.1
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 29 8.8
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 29 8.8
Z49073-7|CAE18044.1| 143|Caenorhabditis elegans Hypothetical pr... 29 8.8
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 29 8.8
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 29 8.8
AF106580-4|ABB51181.1| 304|Caenorhabditis elegans Hypothetical ... 29 8.8
>Z75712-2|CAB00041.1| 254|Caenorhabditis elegans Hypothetical
protein K04G2.4 protein.
Length = 254
Score = 31.9 bits (69), Expect = 0.95
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 240 KSKRNIEVMQTETYHPQPTP--PQEAFAPLSYPGSGHLVNIAENYFQNQYQTATLTP 294
K V+ T + P+PT PQ + P+ GS IA Y Q Q+ T+T P
Sbjct: 93 KKHETTTVVHTNVHVPKPTHKLPQASEIPIERMGSDPHTAIAPTYQQKQFATSTYYP 149
>AL132898-12|CAB60945.3| 576|Caenorhabditis elegans Hypothetical
protein Y59A8B.22 protein.
Length = 576
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 47 NVNGKVVPQKKPGPDCNCRRRCFQKVPEDVRLRTFQGFYSMKTHDEQNAYL 97
N G ++P P P+ + R QK+ E T + F MK HD + YL
Sbjct: 156 NYAGFIIPPAPPKPNFDSSREKLQKLGEGEATMTKEEFLKMK-HDLEQDYL 205
>AC006633-6|AAK68378.4| 578|Caenorhabditis elegans Hypothetical
protein F35B3.7 protein.
Length = 578
Score = 29.5 bits (63), Expect = 5.1
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 380 RYNNIFHDEINGAALAAIKTRLGMYYAESDAARKKAKQVRSTDTTQSQSP---PEQLTQL 436
R ++I H E+ + ++ L MY A+ D R+ +RST + S P PEQ+ Q
Sbjct: 343 RVDSILHSELKDSN-GSLSDLLMMYQAK-DTPREMNASIRSTASNSSSFPYFSPEQINQQ 400
Query: 437 GQAVTNVT 444
+T ++
Sbjct: 401 KNVLTTLS 408
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 28.7 bits (61), Expect = 8.8
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 238 LPKSKRNIEVMQTETYH-PQPTPPQE---AFAPLSYPGSGHLVNIAENYFQNQYQT--AT 291
LP++++ V T TY P P PP F P + P +Y N+ +
Sbjct: 781 LPRAQQPPIVQPTRTYQQPAPIPPPNLVNGFNPYN-PSHSQCPPPPMDYSNNRRNSNLTP 839
Query: 292 LTPATNFYQTPN 303
+ P++ FYQTP+
Sbjct: 840 MPPSSTFYQTPS 851
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 28.7 bits (61), Expect = 8.8
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 238 LPKSKRNIEVMQTETYH-PQPTPPQE---AFAPLSYPGSGHLVNIAENYFQNQYQT--AT 291
LP++++ V T TY P P PP F P + P +Y N+ +
Sbjct: 781 LPRAQQPPIVQPTRTYQQPAPIPPPNLVNGFNPYN-PSHSQCPPPPMDYSNNRRNSNLTP 839
Query: 292 LTPATNFYQTPN 303
+ P++ FYQTP+
Sbjct: 840 MPPSSTFYQTPS 851
>Z49073-7|CAE18044.1| 143|Caenorhabditis elegans Hypothetical
protein ZK970.8 protein.
Length = 143
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 154 CKKMDDGIMFPSDNRG--KNSHRRSGEVRLPADIIDQIKNHIYSI-VHTHRLKDFIRLDK 210
C+K++ + D+R K RR V P D++ ++N Y + V TH+ K + +K
Sbjct: 25 CEKVNKDDLINEDDRNLHKVVCRRCKSVIFPEDVVMTVENQPYQLRVMTHQAKGPLAQEK 84
Query: 211 IA 212
I+
Sbjct: 85 IS 86
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 45 YINVNGKVVPQKKPGPDCNCRRRC 68
Y V G+ +P+K+PG DC +C
Sbjct: 217 YSGVTGECLPEKQPGQDCIYSSQC 240
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
protein F48E3.8b protein.
Length = 1299
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 45 YINVNGKVVPQKKPGPDCNCRRRC 68
Y V G+ +P+K+PG DC +C
Sbjct: 217 YSGVTGECLPEKQPGQDCIYSSQC 240
>AF106580-4|ABB51181.1| 304|Caenorhabditis elegans Hypothetical
protein F58B6.1 protein.
Length = 304
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 183 ADIIDQIKNHIYSIVHTHRLKDFIRLDKIAGLEINISKMWKD 224
AD DQ+ + Y ++H + I LD AG + +++W D
Sbjct: 209 ADTHDQLVPYSYRVIHKRDIVSHIPLDGQAGFHHHRNEIWYD 250
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.132 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,274,339
Number of Sequences: 27539
Number of extensions: 419058
Number of successful extensions: 1016
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1011
Number of HSP's gapped (non-prelim): 11
length of query: 450
length of database: 12,573,161
effective HSP length: 84
effective length of query: 366
effective length of database: 10,259,885
effective search space: 3755117910
effective search space used: 3755117910
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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