GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001116-TA|BGIBMGA001116-PA|undefined
         (450 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   4.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   5.2  

>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 9/45 (20%), Positives = 24/45 (53%)

Query: 232 DNLSATLPKSKRNIEVMQTETYHPQPTPPQEAFAPLSYPGSGHLV 276
           + L   L ++++ +E++  E + P+    +E  +PL+     H++
Sbjct: 17  NQLQHVLEETQQALELINLENFFPEENVVEELLSPLTLNRITHIL 61


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 6/60 (10%)

Query: 246 EVMQTETYHPQPTPP---QEAFAPLSYPGSGH---LVNIAENYFQNQYQTATLTPATNFY 299
           EV  T +  PQ  P    +E F  L+   +      V   E++FQ +Y  A++TP    Y
Sbjct: 391 EVEGTLSVQPQANPVKGFEEYFLNLTVENNRRNPWFVEFWEHHFQCRYPNASVTPYNKNY 450


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.132    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,954
Number of Sequences: 429
Number of extensions: 4647
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 450
length of database: 140,377
effective HSP length: 60
effective length of query: 390
effective length of database: 114,637
effective search space: 44708430
effective search space used: 44708430
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)