Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001115-TA|BGIBMGA001115-PA|IPR001173|Glycosyl
transferase, family 2
         (335 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   5.5  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   9.6  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 270 WAFDVELLYIAQKLNIPISEIPVR 293
           +A  V  ++   KL IP+  IP+R
Sbjct: 226 YAVIVRTIWSKSKLLIPVGHIPIR 249


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 270 WAF-DVELLYIAQKLNIPISEIPVRWTEIEGSKVTPVVAWIQMGCD 314
           W + D+ ++ I+  L     +I  R   +   KVT   +WI +  D
Sbjct: 225 WTYNDLFVMLISTALAYRFGQITRRIAAVASEKVTSEKSWIALNDD 270


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)

Query: 95  ENRQKENPSYKYEIIIV 111
           E + KE P Y Y  +I+
Sbjct: 77  EKKSKEKPPYSYNALIM 93


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.137    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,498
Number of Sequences: 317
Number of extensions: 2714
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 3
length of query: 335
length of database: 114,650
effective HSP length: 57
effective length of query: 278
effective length of database: 96,581
effective search space: 26849518
effective search space used: 26849518
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)