Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001115-TA|BGIBMGA001115-PA|IPR001173|Glycosyl
transferase, family 2
(335 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125965-1|AAL38962.1| 339|Caenorhabditis elegans Hypothetical ... 256 1e-68
AF125462-6|AAD12857.2| 239|Caenorhabditis elegans Hypothetical ... 69 4e-12
Z71259-4|CAA95792.1| 328|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AL033514-11|CAE47472.1| 436|Caenorhabditis elegans Hypothetical... 37 0.018
AL033514-10|CAA22098.1| 605|Caenorhabditis elegans Hypothetical... 37 0.018
AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical ... 29 4.7
AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical... 29 4.7
AL021492-12|CAJ76949.1| 622|Caenorhabditis elegans Hypothetical... 29 4.7
AL021492-11|CAA16378.1| 684|Caenorhabditis elegans Hypothetical... 29 4.7
AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein... 29 4.7
Z74038-5|CAA98494.1| 137|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z70718-10|CAA94679.1| 512|Caenorhabditis elegans Hypothetical p... 29 6.1
Z68879-11|CAA93090.1| 512|Caenorhabditis elegans Hypothetical p... 29 6.1
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 28 8.1
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL021481-3|CAD90182.1| 459|Caenorhabditis elegans Hypothetical ... 28 8.1
AL021481-2|CAA16334.1| 595|Caenorhabditis elegans Hypothetical ... 28 8.1
>AF125965-1|AAL38962.1| 339|Caenorhabditis elegans Hypothetical
protein H43I07.3 protein.
Length = 339
Score = 256 bits (628), Expect = 1e-68
Identities = 121/253 (47%), Positives = 166/253 (65%), Gaps = 7/253 (2%)
Query: 75 PAYNEEKRLPPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKVAESYSIKYGSDK 134
PA NE +R+ MLD+ ++LE R +++ + YEII+V DGS D T + +
Sbjct: 88 PAMNEVERIEIMLDDCCDYLEARAEKDKDFTYEIIVVDDGSTDETADIVVQIGAR--RQN 145
Query: 135 VKCLELIKNRGKGGAVRLGIQSSRGATILFADADGASKFEDLTKLEVALKDIVKCDPLKD 194
++ L++ NRGKGGAV++G+ S G ILFADADGA+KF D LE + +PL +
Sbjct: 146 LRVLKMKANRGKGGAVKMGVLHSSGKLILFADADGATKFADFENLEKEMLRTAGGEPLDE 205
Query: 195 VKTTSESLGIVIGSRAHLEKESLAKRNIFRNILMYGFHFLVWLFTVKGIKDTQCGFKLFT 254
+++ SRAHLE ES+A R++ R ILM GFH LV+ F + IKDTQCGFKLFT
Sbjct: 206 -----SFPAVIVASRAHLEAESMAVRSVPRTILMLGFHLLVYTFAARTIKDTQCGFKLFT 260
Query: 255 RKAARICFESLHVNRWAFDVELLYIAQKLNIPISEIPVRWTEIEGSKVTPVVAWIQMGCD 314
R A F LH+ RWAFDVEL+++ ++ +P+ E+ VRWTEIEGSK+TP+ +W+QMG D
Sbjct: 261 RSIAARIFPVLHIERWAFDVELIFLCERWTVPVKEVSVRWTEIEGSKITPIWSWLQMGRD 320
Query: 315 LGLIWLKYRIGAW 327
L LIW +Y IG W
Sbjct: 321 LVLIWFRYTIGIW 333
>AF125462-6|AAD12857.2| 239|Caenorhabditis elegans Hypothetical
protein Y66H1A.2 protein.
Length = 239
Score = 69.3 bits (162), Expect = 4e-12
Identities = 60/223 (26%), Positives = 106/223 (47%), Gaps = 24/223 (10%)
Query: 75 PAYNEEKRLPPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKVAESYSIKYGSDK 134
P YNE++ LP I +EN KE +E+IIV D S D T +A+ +YG DK
Sbjct: 12 PTYNEKENLPIC----IWLIENYLKE---VSHEVIIVDDASPDGTQGIAKLLQKEYGDDK 64
Query: 135 VKCLELIKNRGKGGAVRLGIQSSRGATILFADADGASKFEDLTKLEVALKDIVKCDPLKD 194
+ + G G A G+ +RG I+ DAD + + + ++ +AL+ K D
Sbjct: 65 ILIKPRVGKLGLGTAYSHGLSFARGEFIILMDADLSHHPKFIPEM-IALQHKYKLD---- 119
Query: 195 VKTTSESLGIVIGSRAHLEKESLAKRNIFRNILMYGFHFLVWLFTVKGIKDTQCGFKLFT 254
IV G+R + + ++ ++ R + G +FL G+ D F+L+
Sbjct: 120 ---------IVTGTR-YKDGGGVSGWDLKRKTISKGANFLAQFLLNPGVSDLTGSFRLYK 169
Query: 255 RK-AARICFESLHVNRWAFDVELLYIAQKLNIPISEIPVRWTE 296
R +++ ES+ + F +E+++ A+K I E+P+ + +
Sbjct: 170 RDILSKLIAESVS-KGYVFQMEMMFRAKKSGYRIGEVPISFVD 211
>Z71259-4|CAA95792.1| 328|Caenorhabditis elegans Hypothetical
protein F13G3.6 protein.
Length = 328
Score = 42.3 bits (95), Expect = 5e-04
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 75 PAYNEEKRLPPMLDETIE-FLENRQKENPSYKYEIIIVSDGSKDSTVKVAESYSIKYG-- 131
PA N EK L ET+ L+ EN K EI + DGS D TV++ E+ +++
Sbjct: 13 PAKNVEK----FLRETLNGLLDQTACENS--KIEICLADDGSVDDTVRILENARLEFEEM 66
Query: 132 SDKVKCLELIKNRGKGGAVRLGIQSSRGATILFADADGASKFEDL-TKLEVALK 184
V + + G G A ++SS+G + F DAD S + ++LE+A K
Sbjct: 67 GMNVVVTHVPQPGGVGAAKDCAVRSSKGRYLCFNDADDVSSPNRIKSQLELATK 120
>AL033514-11|CAE47472.1| 436|Caenorhabditis elegans Hypothetical
protein Y75B8A.9b protein.
Length = 436
Score = 37.1 bits (82), Expect = 0.018
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 84 PPMLDETIEFLENRQKENPSYKYEIIIVSDGSK-----DSTVKVAESYSIKYGSDKVKCL 138
P +L + + +R K P + +EI++V D S+ D +K E + I++ +KVK L
Sbjct: 172 PSVLIRMVNSIFDRTK--PEHLHEILLVDDSSEWSNATDEAIKYREKHIIQW--EKVKFL 227
Query: 139 ELIKNRGKGGAVRLGIQSSRGATILFADA 167
+ KN G A G + + G ++F D+
Sbjct: 228 KTDKNEGLIRAKIFGARRANGEVLVFLDS 256
>AL033514-10|CAA22098.1| 605|Caenorhabditis elegans Hypothetical
protein Y75B8A.9a protein.
Length = 605
Score = 37.1 bits (82), Expect = 0.018
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 84 PPMLDETIEFLENRQKENPSYKYEIIIVSDGSK-----DSTVKVAESYSIKYGSDKVKCL 138
P +L + + +R K P + +EI++V D S+ D +K E + I++ +KVK L
Sbjct: 172 PSVLIRMVNSIFDRTK--PEHLHEILLVDDSSEWSNATDEAIKYREKHIIQW--EKVKFL 227
Query: 139 ELIKNRGKGGAVRLGIQSSRGATILFADA 167
+ KN G A G + + G ++F D+
Sbjct: 228 KTDKNEGLIRAKIFGARRANGEVLVFLDS 256
>AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 79 EEKRLPPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKV 122
+++RLPP+LDE + + N + YE+I ++ +KV
Sbjct: 470 DQQRLPPLLDEKFQLVRLIGDGNTAVVYEVIDKTNNDDRKAMKV 513
>AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 79 EEKRLPPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKV 122
+++RLPP+LDE + + N + YE+I ++ +KV
Sbjct: 470 DQQRLPPLLDEKFQLVRLIGDGNTAVVYEVIDKTNNDDRKAMKV 513
>AL021492-12|CAJ76949.1| 622|Caenorhabditis elegans Hypothetical
protein Y45F10D.3b protein.
Length = 622
Score = 29.1 bits (62), Expect = 4.7
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 102 PSYKYEIIIVSDGSKDSTVKVA-ESYSIKYGSDK-VKCLELIKNRGKGGAVRLGIQSSRG 159
P EII+V D S+ ++ E + K D VK L K G +LG Q + G
Sbjct: 186 PELLKEIILVDDFSEKPALRQPLEDFLKKNKIDHIVKVLRTKKREGLIRGRQLGAQDATG 245
Query: 160 ATILFADADGASKFEDLTKL 179
++F DA + + L L
Sbjct: 246 EILIFLDAHSEANYNWLPPL 265
>AL021492-11|CAA16378.1| 684|Caenorhabditis elegans Hypothetical
protein Y45F10D.3a protein.
Length = 684
Score = 29.1 bits (62), Expect = 4.7
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 102 PSYKYEIIIVSDGSKDSTVKVA-ESYSIKYGSDK-VKCLELIKNRGKGGAVRLGIQSSRG 159
P EII+V D S+ ++ E + K D VK L K G +LG Q + G
Sbjct: 248 PELLKEIILVDDFSEKPALRQPLEDFLKKNKIDHIVKVLRTKKREGLIRGRQLGAQDATG 307
Query: 160 ATILFADADGASKFEDLTKL 179
++F DA + + L L
Sbjct: 308 EILIFLDAHSEANYNWLPPL 327
>AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein
protein.
Length = 802
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 79 EEKRLPPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKV 122
+++RLPP+LDE + + N + YE+I ++ +KV
Sbjct: 470 DQQRLPPLLDEKFQLVRLIGDGNTAVVYEVIDKTNNDDRKAMKV 513
>Z74038-5|CAA98494.1| 137|Caenorhabditis elegans Hypothetical
protein F58B4.4 protein.
Length = 137
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 84 PPMLDETIEFLENRQKENPSYKYEIIIVSDGSKDSTVKVAESYSIKYGSDKVKCLELIKN 143
PP+++ T+E + NR + + IV D D + K +I+Y SD +K +I +
Sbjct: 35 PPIVNITVELVSNRSFDPEKNASNLKIVKDAVDDYSKK----ENIRYPSDNIK-QSIIDH 89
Query: 144 RGK 146
GK
Sbjct: 90 GGK 92
>Z70718-10|CAA94679.1| 512|Caenorhabditis elegans Hypothetical
protein C04G2.11 protein.
Length = 512
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 224 RNILMYGFHFLVWLFTVKGIKDTQCGFKL 252
+NIL FH +WLF + + C F +
Sbjct: 30 KNILRMFFHIFMWLFYLSEVDSDNCSFNV 58
>Z68879-11|CAA93090.1| 512|Caenorhabditis elegans Hypothetical
protein C04G2.11 protein.
Length = 512
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 224 RNILMYGFHFLVWLFTVKGIKDTQCGFKL 252
+NIL FH +WLF + + C F +
Sbjct: 30 KNILRMFFHIFMWLFYLSEVDSDNCSFNV 58
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
protein F54D11.2 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 153 GIQSSRGATILFADADGASKFEDLTKLEVALKDIVKCDPLKDVKTTSESLGIVIGSRAHL 212
G+ + + DG K ED+ V K + K D K +K + L I + +
Sbjct: 347 GVNETMDTILAKVCEDGVEKHEDIDPKVVKAKKLAKIDYTKRLKLQVKKLDIQMRIKIPS 406
Query: 213 EKESLAKR 220
E L KR
Sbjct: 407 TPEELGKR 414
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 91 IEFLENRQKENPSYKYEIIIVSDGSKD--STVKVAESYSIKYGSDKVKCLELIKNRG 145
++ LEN ++ + KY + +V +D S +K A IK + KC+ ++ +G
Sbjct: 3675 VKLLENGEQLPTAGKYAVSVVGKSIRDVVSKIKEAAPQQIKLCQESSKCVLMLTGQG 3731
>AL021481-3|CAD90182.1| 459|Caenorhabditis elegans Hypothetical
protein Y43F4B.5b protein.
Length = 459
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/18 (66%), Positives = 15/18 (83%), Gaps = 2/18 (11%)
Query: 303 TPVVAW--IQMGCDLGLI 318
TPVV+W I++GCD GLI
Sbjct: 130 TPVVSWATIKLGCDAGLI 147
>AL021481-2|CAA16334.1| 595|Caenorhabditis elegans Hypothetical
protein Y43F4B.5a protein.
Length = 595
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/18 (66%), Positives = 15/18 (83%), Gaps = 2/18 (11%)
Query: 303 TPVVAW--IQMGCDLGLI 318
TPVV+W I++GCD GLI
Sbjct: 130 TPVVSWATIKLGCDAGLI 147
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.137 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,382,437
Number of Sequences: 27539
Number of extensions: 287447
Number of successful extensions: 685
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 673
Number of HSP's gapped (non-prelim): 18
length of query: 335
length of database: 12,573,161
effective HSP length: 82
effective length of query: 253
effective length of database: 10,314,963
effective search space: 2609685639
effective search space used: 2609685639
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -