Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001114-TA|BGIBMGA001114-PA|undefined
(83 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 33 0.004
SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr 2... 28 0.20
SPBC244.01c |sid4||SIN component scaffold protein Sid4 |Schizosa... 27 0.45
SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces ... 26 0.79
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 26 0.79
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 1.0
SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces pom... 25 1.0
SPBC3E7.12c |chr1|cfh4|chitin synthase regulatory factor |Schizo... 25 1.8
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 24 2.4
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 23 4.2
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 23 4.2
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 23 4.2
SPAC3A12.03c |mug145||ubiquitin-protein ligase E3 |Schizosacchar... 23 4.2
SPAC3G6.10c |||GARP complex subunit Vps51 |Schizosaccharomyces p... 23 4.2
SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr 2... 23 5.6
SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr 2|||M... 23 5.6
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 23 5.6
SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 23 7.3
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 23 7.3
SPBC1347.06c |cki1||serine/threonine protein kinase Cki1|Schizos... 22 9.7
SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces pomb... 22 9.7
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 22 9.7
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 33.5 bits (73), Expect = 0.004
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 3 HHQESNNRDVTSADVTLFKNIAFVSTPSS-EVGSHA----ASAQQQPGDQITVSAEEDYP 57
H +++ N+DV+ A +L ++ ++TPSS + H ++ Q P ++ +EED
Sbjct: 310 HTEDNYNKDVSDAQNSLGQSAVDLTTPSSPPIPRHTKPKLSTTQSTPVKPASLQSEEDIQ 369
Query: 58 LASADEPVPSASQTSMVERRNQQ 80
L S +P SAS + E+ Q
Sbjct: 370 L-SFKQPELSASSAELDEKLKSQ 391
>SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 27.9 bits (59), Expect = 0.20
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 61 ADEPVPSASQTSMVERRNQQS 81
ADEP PS+++TS ++R Q+S
Sbjct: 213 ADEPSPSSTETSSIKRAFQES 233
>SPBC244.01c |sid4||SIN component scaffold protein Sid4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 26.6 bits (56), Expect = 0.45
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 3 HHQESNNRDVTSADVTLFKNIA--FVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLAS 60
HH+ S N + S T +KN+A + +PS+ H+ S P T S ++
Sbjct: 121 HHEPSFNSEKASYTSTPYKNVAPKVIDSPSAR-HMHSNSPSFPPSQSHTSSYDQSPKGQL 179
Query: 61 ADE-PVPSASQTSMVERRNQQSTD 83
D VP+ E NQQS +
Sbjct: 180 RDNISVPNQQDGLDPEVFNQQSKE 203
>SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.8 bits (54), Expect = 0.79
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 33 VGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQTSM 73
VGS AA+ +P + S E + PVPSA++ S+
Sbjct: 178 VGSQAAAPTSRPVENDAASILEALAAFAQKAPVPSAAEESV 218
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.8 bits (54), Expect = 0.79
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 38 ASAQQQPGDQITVSAEEDYPLASADEPVPSASQTSMVERRNQQ 80
++ Q+ P + + + E++ S E P+A QTS VE N Q
Sbjct: 372 STKQENPEEDMQIKDAEEH---SNLESTPAAQQTSEVEANNHQ 411
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.4 bits (53), Expect = 1.0
Identities = 17/77 (22%), Positives = 33/77 (42%)
Query: 7 SNNRDVTSADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVP 66
S++ +TS +T ++ S+ + A+S + TVS D P + P
Sbjct: 212 SSSETLTSVSITSTESAYTSSSVDIAASTTASSTLPVSTSEATVSFSTDIPATPSTLSSP 271
Query: 67 SASQTSMVERRNQQSTD 83
++S +S + + TD
Sbjct: 272 ASSSSSYLVETSSTLTD 288
>SPBC16H5.12c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 25.4 bits (53), Expect = 1.0
Identities = 14/69 (20%), Positives = 31/69 (44%)
Query: 2 SHHQESNNRDVTSADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASA 61
S Q + NR+ T+ + + + E+G A+ ++ + V E+ P A+
Sbjct: 388 SQAQFTKNREATATPTEEEQIEGYDQEHTDELGMSRANTTEESAETHEVIEEKSGPPAAE 447
Query: 62 DEPVPSASQ 70
+EP+ ++
Sbjct: 448 EEPISGVAE 456
>SPBC3E7.12c |chr1|cfh4|chitin synthase regulatory factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 456
Score = 24.6 bits (51), Expect = 1.8
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 46 DQITVSAEEDYPLASADEPVPSAS 69
D ++V E++ PLA P+P+ S
Sbjct: 29 DNVSVKIEQESPLALEGSPLPTVS 52
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 24.2 bits (50), Expect = 2.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 55 DYPLASADEPVPSASQTSMVERRNQQST 82
+YP ++ + S+ ++S+ ERRN S+
Sbjct: 128 EYPFTLSESAISSSHKSSIPERRNFDSS 155
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 23.4 bits (48), Expect = 4.2
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 24 AFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQTSMVERRN 78
A+V+TP ++ S+AAS QP Q T S ++ P P SQ + E +N
Sbjct: 206 AYVNTPLNQPPSYAAST--QPEFQQTTSPIFS-SSSTPPPPPPRPSQPTSGESQN 257
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 29 PSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQTS 72
P SE + + Q ++ + E+ L+S+ P P SQ S
Sbjct: 304 PESEPSKPSIAPSQPSKTNVSAAYEKPAELSSSSVPFPHKSQDS 347
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 23.4 bits (48), Expect = 4.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 36 HAASAQQQPGDQITVSAEEDYPLASADEPVPSA 68
H + + ITV E ++ L + DEPV S+
Sbjct: 364 HILESTPSNSETITVDPEGNWKLNTFDEPVESS 396
>SPAC3A12.03c |mug145||ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 23.4 bits (48), Expect = 4.2
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 20 FKNIAFVSTPSSEVGSHAA-SAQQQPGDQITVSAEEDYPLASA 61
+K + SS +AA S PGD T SAE D L SA
Sbjct: 251 YKYFLQMDAASSVTHENAAWSIPLSPGDSRTHSAETDRSLLSA 293
>SPAC3G6.10c |||GARP complex subunit Vps51 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 159
Score = 23.4 bits (48), Expect = 4.2
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 25 FVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASAD 62
F + P S S S ++P TVS E+ L D
Sbjct: 12 FYNLPGSNSSSSTVSTTRKPSSSNTVSPVEETALDKVD 49
>SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 479
Score = 23.0 bits (47), Expect = 5.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 59 ASADEPVPSASQTSMVERRNQQSTD 83
A A PVPS +++ ERR+ T+
Sbjct: 81 ALAKNPVPSPAESESSERRHTPQTN 105
>SPBC2G5.05 |||transketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 685
Score = 23.0 bits (47), Expect = 5.6
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 11 DVTSADVTLFKNIAFVSTPSSEVGSHA 37
D+T +++T ++ A PSS++G++A
Sbjct: 386 DLTPSNLTRWEGAADFQPPSSKLGTYA 412
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 23.0 bits (47), Expect = 5.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 34 GSHAASAQQQPGDQITVSAEEDYPLASADEPVPS 67
GSHA AQQ+ + + S + L+ DE P+
Sbjct: 774 GSHARLAQQKLDESLRHSDKVSQHLSLRDEGTPN 807
>SPCC1259.02c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 822
Score = 22.6 bits (46), Expect = 7.3
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Query: 30 SSEVGSHAASAQQQPG-DQITVSAEEDYPLASADEPV 65
S+EV H ASA PG D+++ D DEPV
Sbjct: 620 SNEVSLHIASADSAPGFDKLS----SDLSSLLTDEPV 652
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 22.6 bits (46), Expect = 7.3
Identities = 11/56 (19%), Positives = 27/56 (48%)
Query: 27 STPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQTSMVERRNQQST 82
+T ++ + ++SAQ + S PL+SA+ +++ ++ + N +T
Sbjct: 261 TTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTT 316
>SPBC1347.06c |cki1||serine/threonine protein kinase
Cki1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 22.2 bits (45), Expect = 9.7
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 29 PSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQTS 72
P+ ++ S + + Q Q VS DY A+ + SAS ++
Sbjct: 323 PAPKLESKSPALQNHASTQNVVSKRSDYEKPFAEPHLNSASDSA 366
>SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 22.2 bits (45), Expect = 9.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 22 NIAFVSTPSSEVGSHAASAQQQP 44
NI + TP E H + QQ+P
Sbjct: 144 NIELLDTPKLEKDLHKSELQQKP 166
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 22.2 bits (45), Expect = 9.7
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 21 KNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLAS 60
KN AF S SS S +S+ G Q +PL S
Sbjct: 218 KNFAFTSGSSSTNNSTTSSSSMANGLQSISKHSAAFPLLS 257
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.302 0.114 0.299
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 335,079
Number of Sequences: 5004
Number of extensions: 10637
Number of successful extensions: 32
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 22
length of query: 83
length of database: 2,362,478
effective HSP length: 60
effective length of query: 23
effective length of database: 2,062,238
effective search space: 47431474
effective search space used: 47431474
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
S2: 45 (22.2 bits)
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