Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001114-TA|BGIBMGA001114-PA|undefined
(83 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0620 - 5416197-5416225,5416333-5416652,5417144-5417235,541... 32 0.066
03_02_0433 + 8398455-8399601,8399677-8399976,8400085-8401421 31 0.15
12_02_0674 - 21745321-21746223,21746229-21747608 29 0.35
01_06_1416 - 37174913-37175006,37175299-37175441,37175932-371760... 29 0.47
11_06_0695 - 26340161-26340804,26342057-26343429,26344074-263441... 28 0.82
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365... 27 1.9
02_04_0003 + 18832467-18832543,18832627-18832849,18832985-188333... 27 1.9
04_04_1070 + 30579263-30579861,30579970-30580095,30580190-30580394 27 2.5
01_06_0508 - 29897536-29897982 27 2.5
07_01_0767 + 5896982-5897572,5897664-5897861 26 3.3
10_05_0107 - 9223680-9223980,9224340-9224715,9225722-9225817,922... 26 4.3
08_02_0928 - 22688277-22688648,22689378-22689443,22689543-226895... 26 4.3
02_01_0758 + 5623953-5624171,5624251-5624430,5624533-5624591,562... 26 4.3
09_06_0311 + 22218219-22218421,22219157-22219422,22219881-222200... 25 5.7
06_03_0159 - 17358853-17360781 25 5.7
03_02_0968 - 12791229-12791423,12791831-12791928,12792021-12792222 25 5.7
02_05_0903 - 32630190-32630461,32631084-32631470,32631727-326318... 25 5.7
01_06_0450 + 29472531-29472838,29472998-29473092,29473195-294732... 25 5.7
01_04_0010 - 15058175-15058195,15058320-15058430,15059031-150592... 25 5.7
11_01_0277 + 2060328-2061061,2061360-2061420,2061560-2061679,206... 25 7.6
>08_01_0620 -
5416197-5416225,5416333-5416652,5417144-5417235,
5417304-5417394,5417489-5417577,5417812-5417929,
5418007-5418098,5418180-5418215,5418323-5418403,
5418510-5418617,5418809-5418901,5419045-5419146,
5419345-5419449,5419526-5419612,5419952-5420227
Length = 572
Score = 31.9 bits (69), Expect = 0.066
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 29 PSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQTSMVERRNQQSTD 83
P++ V + +AQ++ D + +E D + +DE VP+ S+ V +N STD
Sbjct: 158 PAAPVKKTSVTAQKKKDDSDSSESESDE--SDSDEDVPTKSKAPAVAAKNDDSTD 210
>03_02_0433 + 8398455-8399601,8399677-8399976,8400085-8401421
Length = 927
Score = 30.7 bits (66), Expect = 0.15
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 6 ESNNRDV---TSADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASAD 62
E +NR T+ +V++ I V H ++ ++P D + E+ PL S
Sbjct: 416 EDDNRSAEVDTNCEVSIGSEICEREQDDHVVPFHESAEFEEPTDPLAYPDEQPLPLESLH 475
Query: 63 EPVPSASQTSMVERRNQ 79
E P+A + S E+ +
Sbjct: 476 ETDPTAQEASETEQEEE 492
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 29.5 bits (63), Expect = 0.35
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 26 VSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQTSMV 74
+STP+S++ S A++ + S PL++A +PS +TS++
Sbjct: 501 LSTPTSQIPSTASTRELSTATGKIPSTPRTNPLSTATSKIPSTPRTSLL 549
>01_06_1416 -
37174913-37175006,37175299-37175441,37175932-37176027,
37177125-37177364,37177456-37177812,37178020-37178097,
37178387-37178434,37179406-37179675,37179954-37180054,
37180452-37180605
Length = 526
Score = 29.1 bits (62), Expect = 0.47
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 11 DVTSADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYP----LASADEPVP 66
D +SA T+ + VS S S QQQPG ++ + +DY LA+A P
Sbjct: 96 DSSSAQNTM-PQMELVSPASIRASSEHQHQQQQPGQEVMMVTTDDYSYKPGLAAAS---P 151
Query: 67 SASQTSMVERRNQQ 80
S Q ++ QQ
Sbjct: 152 SFQQQHQLQHHQQQ 165
>11_06_0695 -
26340161-26340804,26342057-26343429,26344074-26344173,
26345230-26345362,26346857-26347258
Length = 883
Score = 28.3 bits (60), Expect = 0.82
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 27 STPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQTSMVERRNQQ 80
+TP V +AA A QPG A P+A+A + A T +V +Q+
Sbjct: 536 TTPLQGVARYAARAAHQPGCTDVACAGSGQPIAAAVDAARRADATIVVAGLDQK 589
>07_03_0111 + 13535912-13535972,13536081-13536142,13536418-13536510,
13537577-13537649,13537876-13538265,13538337-13538404,
13539334-13539375,13540211-13540735,13540817-13540974,
13541078-13541636,13542438-13542500,13542579-13542680,
13542779-13543096,13543175-13543267,13543489-13543590,
13543678-13543782,13544190-13544323,13545097-13545280,
13545701-13545832,13546215-13546327,13546468-13546558,
13547138-13549339
Length = 1889
Score = 27.1 bits (57), Expect = 1.9
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 4 HQESNNRDVTSADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEED 55
++ES RD S+ + +I +S +S GS+ AS + P D + +A+ED
Sbjct: 1137 NEESKGRDSESSK-RRYSSIKVLS--NSNGGSNVASPEVSPRDSTSANADED 1185
>02_04_0003 +
18832467-18832543,18832627-18832849,18832985-18833375,
18833766-18834223,18834320-18834607,18834679-18835398
Length = 718
Score = 27.1 bits (57), Expect = 1.9
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 1 MSHHQESNNRDVTSADVTLFKNIAFVSTPSSEVG---SHAASAQQQPGDQITVSAEEDY 56
MS+ QE+NN ++ TL K A S SS+ S + D VSA+ED+
Sbjct: 566 MSNSQEANNNEIRRRGRTLGKKPAVESDDSSDSKDSMSDGICVGVEDDDGEDVSADEDF 624
>04_04_1070 +
30579263-30579861,30579970-30580095,30580190-30580394
Length = 309
Score = 26.6 bits (56), Expect = 2.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 23 IAFVSTPSSEVGSHAASAQQQPGDQITVSA 52
++ +S+ S G+H AS QQQP +I A
Sbjct: 35 VSSLSSSSQAAGAHKASPQQQPFGEIADQA 64
>01_06_0508 - 29897536-29897982
Length = 148
Score = 26.6 bits (56), Expect = 2.5
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 14 SADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVP 66
SAD + + T S+ + +A+AQ DQ+ + A E P+ P P
Sbjct: 25 SADTRGLCSKCYRQTVMSQASAPSAAAQSAEHDQVVLPAPEGVPVDEGAMPPP 77
>07_01_0767 + 5896982-5897572,5897664-5897861
Length = 262
Score = 26.2 bits (55), Expect = 3.3
Identities = 19/72 (26%), Positives = 29/72 (40%)
Query: 2 SHHQESNNRDVTSADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASA 61
SH S++ DV LF ++ T GS +A + PGD + LA
Sbjct: 58 SHRSLSSSGAGGGGDVELFATMSREFTAMVAAGSSSAPSPDVPGDAPAAADLNLLQLARI 117
Query: 62 DEPVPSASQTSM 73
E P+A ++
Sbjct: 118 GENEPAAEANAL 129
>10_05_0107 -
9223680-9223980,9224340-9224715,9225722-9225817,
9225870-9225930
Length = 277
Score = 25.8 bits (54), Expect = 4.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 42 QQPGDQITVSAEEDYPLASADEPVPS 67
Q+ G Q+ VS + +P ASA P S
Sbjct: 115 QRQGQQVLVSGKGSFPWASASSPARS 140
>08_02_0928 -
22688277-22688648,22689378-22689443,22689543-22689591,
22689677-22689684
Length = 164
Score = 25.8 bits (54), Expect = 4.3
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 33 VGSHAASAQQQPGDQIT-VSAEEDYPLASADEPVPSASQTSMVER 76
V SHAASA PG ++ A D A + P P + + SM R
Sbjct: 94 VASHAASAAAGPGTRVQGDEAGGDSGDAPSRRPAPPSVELSMPRR 138
>02_01_0758 +
5623953-5624171,5624251-5624430,5624533-5624591,
5625243-5625390,5625476-5625547,5625636-5625746,
5626615-5626882,5627222-5627265,5627393-5627477,
5627554-5627600
Length = 410
Score = 25.8 bits (54), Expect = 4.3
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 27 STPSSEVG----SHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQTSMVERRNQQST 82
STPSS + + + A G +I + D A EP S +TS+ + + ++ T
Sbjct: 99 STPSSTLSKAPVARVSHADSSTGSKINGDSSVDRNKAEKQEPRSSTKETSLEDSKEKRKT 158
>09_06_0311 +
22218219-22218421,22219157-22219422,22219881-22220050,
22220149-22220365,22220798-22221021,22221559-22221738,
22221875-22222013,22222107-22222255,22223394-22223505,
22223998-22224506,22224661-22224784,22224904-22225178,
22225507-22225626,22225707-22225769,22225861-22226052,
22226381-22226440,22226535-22226738,22226926-22227051,
22227093-22227254,22227357-22227476,22227665-22227820,
22227895-22227957,22228041-22228168,22228524-22228920,
22229442-22229544,22229646-22229776,22230096-22230167,
22230472-22230553,22231083-22231190,22231288-22231429,
22231659-22231698,22231746-22231876,22232215-22232301,
22232395-22232605,22232687-22232741,22232836-22232927,
22233011-22233071,22233361-22233719
Length = 2010
Score = 25.4 bits (53), Expect = 5.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 54 EDYPLASADEPVPSASQTSMVERR 77
EDY L+S+DE V S S + +V +
Sbjct: 473 EDYKLSSSDESVASVSDSLIVRTK 496
>06_03_0159 - 17358853-17360781
Length = 642
Score = 25.4 bits (53), Expect = 5.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 58 LASADEPVPSASQTSMVERR 77
LA+AD+PVPSAS RR
Sbjct: 63 LAAADDPVPSASTVLAFLRR 82
>03_02_0968 -
12791229-12791423,12791831-12791928,12792021-12792222
Length = 164
Score = 25.4 bits (53), Expect = 5.7
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 11 DVTSADVTLFKNIAFV--STPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSA 68
D T+A T+ + + S + E + A+A+ PG V+ PLA A + +
Sbjct: 11 DATTATTTVLVGVDYSEHSYHALEEAARLAAARFPPGSAEVVAVHARRPLAPAFVAIGAV 70
Query: 69 SQTSMVERRNQQSTD 83
+ VE Q++ +
Sbjct: 71 AAVMSVEAAEQRAVE 85
>02_05_0903 -
32630190-32630461,32631084-32631470,32631727-32631817,
32632320-32632492,32632671-32632842
Length = 364
Score = 25.4 bits (53), Expect = 5.7
Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 1/82 (1%)
Query: 1 MSHHQESNNRDVTSADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLA- 59
+ +H S T+ + + S+ HAA+A +PG + S EE +
Sbjct: 191 LHNHNSSPATSRTTTGQGAAQQLQLQKATSAAGAGHAAAAAGRPGRRGNYSCEEHVIVGK 250
Query: 60 SADEPVPSASQTSMVERRNQQS 81
+P PS+ S R S
Sbjct: 251 QQQQPSPSSRAASASSPRRSSS 272
>01_06_0450 +
29472531-29472838,29472998-29473092,29473195-29473262,
29473347-29473390,29473467-29473544,29473657-29473810,
29474290-29474376,29474653-29474805,29474890-29475000,
29475211-29475276,29475364-29475543
Length = 447
Score = 25.4 bits (53), Expect = 5.7
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 9 NRDVTSADVTLFKNIA-FVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPS 67
N ++ + + N+A P+S+ S A + D + + E+D P + ++ PS
Sbjct: 386 NGFISVTPLNIHGNVAPETGAPASDWLSVAVGLDKAKEDSVVTAEEQDAPAVAEEKEAPS 445
Query: 68 AS 69
A+
Sbjct: 446 AT 447
>01_04_0010 -
15058175-15058195,15058320-15058430,15059031-15059246,
15059327-15059505,15059655-15059820,15059914-15059972,
15060065-15060107,15060285-15060354,15060458-15060547,
15060621-15060742,15060777-15060808,15060876-15061064,
15061148-15061241,15061325-15061412,15061498-15061718,
15061924-15061997,15062081-15062363,15062455-15062589,
15062721-15062942,15063029-15063208,15063305-15063402,
15063522-15063634,15064156-15064259,15064400-15064522,
15064857-15065192
Length = 1122
Score = 25.4 bits (53), Expect = 5.7
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 32 EVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQTSMVERRNQ 79
E S AA+A GD+ + S E+D + D+ A ++V +R +
Sbjct: 77 EEESGAAAAAPGEGDEESQSTEDDEAVVGEDDDADEAEGGAVVGKREK 124
>11_01_0277 +
2060328-2061061,2061360-2061420,2061560-2061679,
2061947-2062112,2062229-2062635
Length = 495
Score = 25.0 bits (52), Expect = 7.6
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 24 AFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASA 61
A TP S+ AA P + SAE D P + A
Sbjct: 22 ASADTPMSDATPSAADTPNLPDTPASASAEPDTPFSDA 59
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.302 0.114 0.299
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,132,438
Number of Sequences: 37544
Number of extensions: 69769
Number of successful extensions: 172
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 158
Number of HSP's gapped (non-prelim): 20
length of query: 83
length of database: 14,793,348
effective HSP length: 62
effective length of query: 21
effective length of database: 12,465,620
effective search space: 261778020
effective search space used: 261778020
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
S2: 52 (25.0 bits)
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