Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001114-TA|BGIBMGA001114-PA|undefined
(83 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 31 0.10
SB_34157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.41
SB_7844| Best HMM Match : RasGEF (HMM E-Value=0.00058) 29 0.41
SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.41
SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.54
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 28 0.95
SB_6189| Best HMM Match : zf-AD (HMM E-Value=4.5) 27 1.7
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.2
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.2
SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 2.9
SB_51776| Best HMM Match : S-antigen (HMM E-Value=0.24) 26 3.8
SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092) 26 3.8
SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 6.7
SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
SB_32903| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
SB_56317| Best HMM Match : DUF1273 (HMM E-Value=1.2) 25 8.8
SB_39621| Best HMM Match : Extensin_2 (HMM E-Value=0.078) 25 8.8
SB_13200| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.8
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 31.5 bits (68), Expect = 0.10
Identities = 14/65 (21%), Positives = 31/65 (47%)
Query: 17 VTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQTSMVER 76
++ F+N S P G + +A+ + + P++++ EP PS+ T +R
Sbjct: 768 ISRFQNPGQASPPGKPPGDQSEAARTPDSNHSMSPGQRTVPVSTSGEPTPSSMTTEKDKR 827
Query: 77 RNQQS 81
++Q+
Sbjct: 828 ESEQA 832
>SB_34157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 29.5 bits (63), Expect = 0.41
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 4 HQESNNRDVTSADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQI 48
HQ +NNR L + A++ T S++VG+ +A ++ D I
Sbjct: 45 HQRNNNRQTGKNSANLESSWAYLGTSSAQVGNISAQLRKSTQDII 89
>SB_7844| Best HMM Match : RasGEF (HMM E-Value=0.00058)
Length = 1299
Score = 29.5 bits (63), Expect = 0.41
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 27 STPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSAS 69
+T +V A+ Q DQ+T SA D P S D+ PSAS
Sbjct: 467 TTSDDQVTPSASDVQTATYDQVTPSAS-DVPTTSDDQVTPSAS 508
Score = 28.3 bits (60), Expect = 0.95
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 13 TSADVTLFKNIAFVSTPSSE-VGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQT 71
T++D + + + V T S + V A+ DQ+T+SA D P S D PSAS
Sbjct: 557 TTSDDQITPSASDVPTTSDDKVTLSASDVPTTSDDQVTLSAS-DVPTTSDDPVTPSASDV 615
Query: 72 S 72
+
Sbjct: 616 T 616
Score = 27.9 bits (59), Expect = 1.3
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 4 HQESNNRDVTSADVTLFKNIA--FVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASA 61
H S+ DV +A A F + +V A+ DQ+T A D P S
Sbjct: 412 HVTSSASDVPAASGDQVTQSASDFPTASGDQVTQSASDVPTTSDDQVTPPAR-DVPTTSD 470
Query: 62 DEPVPSAS--QTSMVERRNQQSTD 83
D+ PSAS QT+ ++ ++D
Sbjct: 471 DQVTPSASDVQTATYDQVTPSASD 494
>SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2147
Score = 29.5 bits (63), Expect = 0.41
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 5 QESNNRDVTSADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEE--DYPLASAD 62
QES + VTSA + +T S ++ Q+ P Q+T E + SA
Sbjct: 1089 QESPSSQVTSATQESRSSQVTSATQESRSSQVTSATQEPPSTQVTSVTHEPPSSQVTSAT 1148
Query: 63 EPVPSASQTSMV-ERRNQQST 82
+ PS+ TS+ E R+ Q T
Sbjct: 1149 QEPPSSQVTSVTQEPRSSQVT 1169
Score = 28.7 bits (61), Expect = 0.72
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 5 QESNNRDVTSADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEED--YPLASAD 62
QES + VTSA A T S ++ Q+ P Q+T + +E + S
Sbjct: 1221 QESRSSQVTSATQEPPSTQATSVTQESPSTQVTSATQESPSSQVTSATQESRYSQVTSVT 1280
Query: 63 EPVPSASQTSMV-ERRNQQST 82
+ PS TS E R+ Q T
Sbjct: 1281 QEPPSTQVTSATQESRSSQVT 1301
Score = 27.5 bits (58), Expect = 1.7
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 5 QESNNRDVTSADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEE--DYPLASAD 62
QES + VTS +T S + Q+ P Q+T +E + SA
Sbjct: 861 QESRSTQVTSVTQESHSTQVTSATQESRSSQVTSVTQEPPSSQVTSVTQESPSTQVTSAT 920
Query: 63 EPVPSASQTSMVE 75
+ PS+ TS+ +
Sbjct: 921 QESPSSQVTSVTQ 933
Score = 25.8 bits (54), Expect = 5.1
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 5 QESNNRDVTSADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEP 64
QES + VTSA + +T S + Q+ P Q+T +E +S
Sbjct: 1305 QESRSSQVTSATQESPSSQVTSATQESRYSQVTSVTQEPPSSQVTSVTQES--RSSQVTS 1362
Query: 65 VPSASQTSMVERRNQQS 81
V S++S V Q+S
Sbjct: 1363 VTQESRSSQVTSVTQES 1379
>SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1490
Score = 29.1 bits (62), Expect = 0.54
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 30 SSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQTSMVERRNQQS 81
+ E H A + +Q +T++ E P D P P Q SM R++++
Sbjct: 1256 AEEARVHQAESLKQGKTNVTINEERRQPFTVTDLPKPQRQQRSMRPGRSERA 1307
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 28.3 bits (60), Expect = 0.95
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 7 SNNRDVTSADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVP 66
S++ TS D + +T ++V A+ DQ+T SA D P S D P
Sbjct: 528 SSDVPTTSDDQVTPSSSDVPTTSDNQVTPSASDVPTTSDDQVTPSAS-DVPTTSDDHVTP 586
Query: 67 SAS 69
SAS
Sbjct: 587 SAS 589
Score = 28.3 bits (60), Expect = 0.95
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 13 TSADVTLFKNIAFVSTPSSE-VGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQT 71
T++D + + + V T S + V A+ DQ+T SA D P S D+ PSAS
Sbjct: 563 TTSDDQVTPSASDVPTTSDDHVTPSASDVPTTSDDQVTPSAS-DVPTTSDDQVTPSASDV 621
Query: 72 SMVERRNQQSTD 83
++D
Sbjct: 622 PTTSDDQPSASD 633
Score = 28.3 bits (60), Expect = 0.95
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 27 STPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSAS 69
+T ++V A+ DQ+T SA D P S D+ PSAS
Sbjct: 726 TTSDNQVTPSASDVPTASDDQVTPSAS-DVPTTSDDQVTPSAS 767
Score = 27.5 bits (58), Expect = 1.7
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 13 TSADVTLFKNIAFVSTPSSE-VGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSAS 69
T++D + + + V T S + V A+ DQ+T SA D P AS ++ PSAS
Sbjct: 651 TTSDDQVTPSASDVPTTSDDHVTPSASDVPTTSDDQVTPSAS-DVPAASDNQVTPSAS 707
Score = 26.2 bits (55), Expect = 3.8
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 26 VSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSAS 69
+ST +V A+ DQ+T A D P S D+ PS+S
Sbjct: 770 MSTSDDQVTPPASDVMSTSDDQVTPPAS-DVPTTSDDQITPSSS 812
Score = 25.8 bits (54), Expect = 5.1
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 27 STPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQTSMVERRNQQSTD 83
+T +V A+ DQ+T SA D P S D+P S +++ ++ S+D
Sbjct: 593 TTSDDQVTPSASDVPTTSDDQVTPSAS-DVPTTSDDQPSASDVKSTSDDQVTPPSSD 648
Score = 25.8 bits (54), Expect = 5.1
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 13 TSADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSAS 69
T++D + + + V T S + S A+ + DQ+T + D P S D+ PSAS
Sbjct: 608 TTSDDQVTPSASDVPTTSDDQPS-ASDVKSTSDDQVTPPSS-DVPTTSDDQVTPSAS 662
Score = 25.4 bits (53), Expect = 6.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 27 STPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSA 68
+T +V A+ +Q+T SA D P AS D+ PSA
Sbjct: 681 TTSDDQVTPSASDVPAASDNQVTPSAS-DVPSASDDQVTPSA 721
Score = 25.4 bits (53), Expect = 6.7
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 28 TPSSEVGSHAASAQQQP--GDQITVSAEEDYPLASADEPVPSAS 69
TP+S+ +S+ P DQ+T SA D P AS D+ SAS
Sbjct: 875 TPTSDDQVTPSSSDVTPTSDDQVTPSAS-DVPTASDDQVTQSAS 917
>SB_6189| Best HMM Match : zf-AD (HMM E-Value=4.5)
Length = 194
Score = 27.5 bits (58), Expect = 1.7
Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 5 QESNNRDVTSADVTLFKN--IAFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASAD 62
QE+ + + + V + K F S+P++ + AA+ P + V+ +PL +
Sbjct: 83 QETYDTNEITEKVNILKTRRTRFYSSPATNAATAAANTPNPPDPHVAVTVRVKWPLLDKE 142
Query: 63 EPVP 66
+ +P
Sbjct: 143 KKLP 146
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 27.1 bits (57), Expect = 2.2
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 8 NNRDVTSADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEED 55
N+ +V S+ +L NI S P SE S S + G + V+ EED
Sbjct: 230 NDEEVDSSTGSLSVNIGS-SRPESETASVRESPESDSGSEEKVTIEED 276
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/57 (26%), Positives = 24/57 (42%)
Query: 18 TLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQTSMV 74
T F + + T S VG H S +PG T +E + +S + +TS +
Sbjct: 953 TFFTSKESLGTSVSSVGEHVTSMPSEPGADETGGFQEKFENSSKKRFLKCVGKTSRI 1009
>SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 26.6 bits (56), Expect = 2.9
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 41 QQQPGDQITVSAEEDYPLASADEPVPSASQTSMVERRNQQSTD 83
Q P D I E++ P +SADE V + R +Q+ +
Sbjct: 1225 QSHPTDSIVAVIEQNQPTSSADESVCRLYEVGRSRRFDQEEEE 1267
>SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 26.6 bits (56), Expect = 2.9
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 31 SEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQTSMVERRNQQST 82
S+ H +QQQ + S ++ YP S + P SQ R NQQ T
Sbjct: 206 SQQQRHPRPSQQQRHPR--PSQQQRYPRPSQQQRQPRPSQQQRYPRHNQQQT 255
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 26.6 bits (56), Expect = 2.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 46 DQITVSAEEDYPLASADEPVPSASQ 70
D++T SA ED P ++A+ P PS ++
Sbjct: 618 DKMTHSANEDTPRSNAEIPAPSPAK 642
>SB_51776| Best HMM Match : S-antigen (HMM E-Value=0.24)
Length = 1669
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/62 (20%), Positives = 27/62 (43%)
Query: 11 DVTSADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQ 70
D+ DV IA + SS+ ++ + D+I ++ +E+Y + A + +
Sbjct: 308 DIIDVDVAETLPIAGSAMASSKTSTYPVEDESDADDEIVIAKDEEYEIEMAAAKIKGKGR 367
Query: 71 TS 72
S
Sbjct: 368 KS 369
>SB_5677| Best HMM Match : fn3 (HMM E-Value=0.0092)
Length = 1146
Score = 26.2 bits (55), Expect = 3.8
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 6 ESNNRDVTSADVTLFKNIA-FVSTPSSEVGSHAASAQQQPGDQITVSAEEDYPLASADEP 64
E NR + + + L K +A F+ + H +S + PG ++ + YP A+ D+
Sbjct: 253 EEENRTLQESSLKLQKALATFIKNKEKTLSRHQSS-LRHPGSSKPSTSSKHYP-ATIDQN 310
Query: 65 VPSASQT 71
PS +++
Sbjct: 311 SPSKNKS 317
>SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2324
Score = 25.4 bits (53), Expect = 6.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 14 SADVTLFKNIAFVSTPSSEVGSHAASAQQQPGDQITVSAEEDYP 57
SAD+T + PSS A S ++ITV E++YP
Sbjct: 727 SADITT-ATWGGSTQPSSTQNDSAVSEDGSDTEKITVEVEDEYP 769
>SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1810
Score = 25.0 bits (52), Expect = 8.8
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 31 SEVGSHAASAQQQPGDQITVSAEEDYPLASADEPV-PSASQTSMVERRNQQST 82
S++ SA + G + SA+ PLA +EP+ + S +M++R ST
Sbjct: 309 SDIADQKMSAARPAGKKAQRSAKVLTPLAEEEEPLHDTPSAPAMLDRPQGPST 361
>SB_32903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 25.0 bits (52), Expect = 8.8
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 7 SNNRDVTSADVTLFKNIAFVSTPSSEVGSHAASAQQQ 43
SN+ D T DV + ++I T S +V H S Q
Sbjct: 654 SNDSDATVEDVNMAEHITQAITSSMDVSIHHDSIMNQ 690
>SB_21299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2630
Score = 25.0 bits (52), Expect = 8.8
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 32 EVGSHAASAQQQPGDQITVSAEEDYPLASADEPVPSASQTS 72
+V + A + + VS EED P+AS V +A+Q+S
Sbjct: 1923 QVAAFTAKGEGPRSTDVDVSTEEDVPIASPIN-VQAANQSS 1962
>SB_56317| Best HMM Match : DUF1273 (HMM E-Value=1.2)
Length = 475
Score = 25.0 bits (52), Expect = 8.8
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Query: 13 TSADVTLFKNIAFVSTP-----SSEVGSHAASAQQQPGDQITVSAEEDY 56
TS D L+K F STP S+E+ + QQQ ++I E Y
Sbjct: 147 TSVDNVLYKTAYFNSTPQTIINSTEISEALENTQQQVLNKIAQWVSEGY 195
>SB_39621| Best HMM Match : Extensin_2 (HMM E-Value=0.078)
Length = 539
Score = 25.0 bits (52), Expect = 8.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 26 VSTPSSEVGSHAASAQQQPGDQITVSAEEDYP 57
+S S +HA S QPG+++ ED P
Sbjct: 176 ISDEHSHYYTHAESIVPQPGEEVYEDMSEDKP 207
>SB_13200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 416
Score = 25.0 bits (52), Expect = 8.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 28 TPSSEVGSHAASAQQQPGDQITVSAEEDYPLASA 61
TPS + S SA D+ T SA ++Y S+
Sbjct: 118 TPSHMITSELVSASTTGSDRATASASDEYTSPSS 151
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.302 0.114 0.299
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,518,091
Number of Sequences: 59808
Number of extensions: 78796
Number of successful extensions: 206
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 164
Number of HSP's gapped (non-prelim): 46
length of query: 83
length of database: 16,821,457
effective HSP length: 60
effective length of query: 23
effective length of database: 13,232,977
effective search space: 304358471
effective search space used: 304358471
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
S2: 52 (25.0 bits)
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