GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001113-TA|BGIBMGA001113-PA|undefined
         (87 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U27181-1|AAC46917.1|  926|Drosophila melanogaster MEI-9 protein.       25   9.8  
BT001319-1|AAN71074.1|  961|Drosophila melanogaster AT15210p pro...    25   9.8  
AE014298-619|AAF45938.1|  961|Drosophila melanogaster CG3697-PA ...    25   9.8  

>U27181-1|AAC46917.1|  926|Drosophila melanogaster MEI-9 protein.
          Length = 926

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 14/26 (53%), Positives = 16/26 (61%)

Query: 7   LDIGLTQASPEGAVVGLLKQRIPVNL 32
           L+ GL   S    VV LLKQRIP+ L
Sbjct: 84  LEGGLQFISTRILVVDLLKQRIPIEL 109


>BT001319-1|AAN71074.1|  961|Drosophila melanogaster AT15210p
           protein.
          Length = 961

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 14/26 (53%), Positives = 16/26 (61%)

Query: 7   LDIGLTQASPEGAVVGLLKQRIPVNL 32
           L+ GL   S    VV LLKQRIP+ L
Sbjct: 127 LEGGLQFISTRILVVDLLKQRIPIEL 152


>AE014298-619|AAF45938.1|  961|Drosophila melanogaster CG3697-PA
           protein.
          Length = 961

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 14/26 (53%), Positives = 16/26 (61%)

Query: 7   LDIGLTQASPEGAVVGLLKQRIPVNL 32
           L+ GL   S    VV LLKQRIP+ L
Sbjct: 127 LEGGLQFISTRILVVDLLKQRIPIEL 152


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.133    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,790,658
Number of Sequences: 52641
Number of extensions: 130277
Number of successful extensions: 248
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 245
Number of HSP's gapped (non-prelim): 3
length of query: 87
length of database: 24,830,863
effective HSP length: 66
effective length of query: 21
effective length of database: 21,356,557
effective search space: 448487697
effective search space used: 448487697
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)