Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001112-TA|BGIBMGA001112-PA|undefined
(251 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042
SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_57119| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=1.4e-20) 33 0.30
SB_30478| Best HMM Match : DUF723 (HMM E-Value=4.8) 31 0.91
SB_31307| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41) 31 1.2
SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0) 30 1.6
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_9228| Best HMM Match : GoLoco (HMM E-Value=4.2) 30 2.1
SB_47441| Best HMM Match : NOT2_3_5 (HMM E-Value=0) 30 2.1
SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22) 30 2.1
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 2.8
SB_22024| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.2) 29 2.8
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45) 29 4.8
SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) 29 4.8
SB_4416| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1) 28 6.4
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_44003| Best HMM Match : DUF658 (HMM E-Value=1.1) 28 6.4
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_43809| Best HMM Match : PSGP (HMM E-Value=0.069) 28 6.4
SB_41306| Best HMM Match : Ribosomal_L19e (HMM E-Value=8.5) 28 6.4
SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8) 28 6.4
SB_26457| Best HMM Match : Band_41 (HMM E-Value=0.0026) 28 6.4
SB_19564| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_13376| Best HMM Match : DUF1213 (HMM E-Value=0.18) 28 8.5
SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_22693| Best HMM Match : DUF1042 (HMM E-Value=0.00027) 28 8.5
SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 35.5 bits (78), Expect = 0.042
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 5/117 (4%)
Query: 81 TKDTMPAPQRTPVRRRGAVSPATSVESMSTSVASLASGDEAFRXXXXXXXXXXXXXSTVA 140
T DT+P+ +T ++ V P +SM + + +EA R +
Sbjct: 1883 TGDTVPSDNKTSKAKKITVKPKGKRKSMLAKSKDVKNAEEASRNDEDDTKTGNVSEDLI- 1941
Query: 141 AKGAEPSSSYRKRLREGVAMVRTKLIPTMS-KLVAQLESRE-SRILEDSPVLREGTP 195
K A+P+S RK+ R ++ T T++ + +Q RE R+ ED PV +E P
Sbjct: 1942 -KQAKPTSKTRKK-RASLSAKVTNFEKTVNVDVESQSSERELPRVDEDLPVNQEDVP 1996
>SB_56834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 33.1 bits (72), Expect = 0.23
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Query: 24 STLTSDSGATNPTRPSVGKKRGRRKTPLPTSDDGGASSSSIEVPEKTMAIEVAGAATTKD 83
S ++ SG+ +P R ++ RR P + +SSS+ VP +++ T +
Sbjct: 257 SVVSRPSGSRDPLRTTIRLPPTRRAGPAENNTAAASSSSAARVPPLRISVR-----TIAE 311
Query: 84 TMPAPQRTPVRRRGAVSPATSVESMSTSVASLASGDEAFR 123
P + P R GA S +S + S +G + R
Sbjct: 312 VSPPQEAGPPARGGARSARVGRQSAAAVAVSSEAGGSSTR 351
>SB_57119| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=1.4e-20)
Length = 1423
Score = 32.7 bits (71), Expect = 0.30
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 27 TSDSGATNPTRPSVGKKRGRRKTPLPTSDDGGASSSSIE-VPEKTMAIEVAGAATTKDTM 85
+S G+T SV KK+ R+K PT +G +S++ + +P K + +
Sbjct: 782 SSSQGSTEQENQSVKKKKKRKKKKKPTETEGESSTTKQQPMPTKKTKEPLQFDLGMLLSS 841
Query: 86 PAPQRTPVRRRGAVSPATSVESMSTSVASLASG 118
RT R+ V A ++ T +A+ A+G
Sbjct: 842 VQEVRTKDRKEKQVKKAVVAGTLPTQIANSAAG 874
>SB_30478| Best HMM Match : DUF723 (HMM E-Value=4.8)
Length = 705
Score = 31.1 bits (67), Expect = 0.91
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 18 IAGSMRSTLTSDSGATNPTRPSVGKKRGRRKTPLPTSDDGGASSSSIEVPEKTMAIEVAG 77
I+G + S LT+ GK++G K PL + G +S+ E K A
Sbjct: 22 ISGVLHSELTTTKKFNTKGTNETGKEQGNGKLPL-HAQSGHVASAWTEAAGKISTNISAS 80
Query: 78 AATTKDTMPAPQRTPVRRRGAVSPATS 104
A ++ T+ P+ + AV P T+
Sbjct: 81 AKLSEATVKTPKHNRHSAKHAVEPFTT 107
>SB_31307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 31.1 bits (67), Expect = 0.91
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 18/126 (14%)
Query: 7 RAAEFPSRCSSIAGSMRSTLTSDS----GATNPTRPSVGKKRGRRKTPLPTSDDGGASSS 62
R+ S S+ G++ T+TS S G PT + + R KTP G +++
Sbjct: 100 RSRGVKSPVSNRRGNISRTMTSQSEPYEGRKLPTSRLTNRNKSRAKTP------PGGTAN 153
Query: 63 SIEVPEKTM--------AIEVAGAATTKDTMPAPQRTPVRRRGAVSPATSVESMSTSVAS 114
+ EVPE+ A + TT T+P P TP+ R +V+
Sbjct: 154 TREVPEERAPPFSAMEDAFVIPYHRTTSATLPVPPDTPMTLRVPEKGERTVKDNPKRRGG 213
Query: 115 LASGDE 120
+ GDE
Sbjct: 214 VPPGDE 219
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 30.7 bits (66), Expect = 1.2
Identities = 42/178 (23%), Positives = 65/178 (36%), Gaps = 14/178 (7%)
Query: 22 MRSTLTSDSGATNPTRPSVGKKRGRRKTP---LPTSDDGGASSSSIEVPEKTMAIEVAGA 78
+RST +S S T PT +G G P +P + G + +++ P + V+
Sbjct: 2646 LRSTYSSPSSLTAPTTRRIGGDVGYTPDPTTTIPIVTEEGKTEATL-TPGGQLKSTVSSL 2704
Query: 79 AT-TKDTMPAPQRTPVRRRGAVSPATSV-ESMSTSVASLASGDEAFRXXXXXXXXXXXXX 136
AT T T AP+ T + T+ E+ ++A G
Sbjct: 2705 ATSTPGTSAAPESTAAPETTVTAETTTAPETTFAPETTVAPGTTVAAETTVAQESTVASE 2764
Query: 137 STVAAKGAEPSSSYRKRLREGVAMVRTKLIPTMSKLVAQLESRESRILEDSPVLREGT 194
+TVA P ++Y E A T L P + E+ L +S V E T
Sbjct: 2765 TTVA-----PETTYEP---ETTAAPGTTLAPETTVAPETTYEPETTALPESTVAPETT 2814
>SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41)
Length = 686
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Query: 40 VGKKRGRRKTPLPT---SDDGGASSSSIEVPEKTMAIEVAGAA-TTKDTMPAPQRTPVRR 95
+G +R + PLP S +G +S + + E T A + +T D +P+P +
Sbjct: 84 IGAERALAEDPLPDESFSHNGTFLTSDLRMVENTSVCNNATSPRSTHDPVPSPPQGSRGS 143
Query: 96 RGAVSPATSVESMSTSVASLASGD 119
RG+ SPA S+ SLA G+
Sbjct: 144 RGSHSPARSLSER----GSLADGE 163
>SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 692
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 45 GRRKTPLPTSDDGGASSSSIEVPEKTMAIEVAGAATTKDTMPAPQRTPVRRRGAVSPATS 104
GR+ +PTS A S +P+ A GA T P+P ++P ++S +S
Sbjct: 137 GRKLPIVPTSRPSSAQSRPTGLPKPLKASANLGAGQTSGRTPSPVKSPGHSSSSLSSESS 196
Query: 105 VESMSTSVAS 114
+ ++ S
Sbjct: 197 PKHSPSATPS 206
>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
Length = 695
Score = 30.3 bits (65), Expect = 1.6
Identities = 38/157 (24%), Positives = 59/157 (37%), Gaps = 14/157 (8%)
Query: 28 SDSGATNPTRPSVGKKRGRRKTPLPTSDDGGASSSSIEVPEKTMAIEVAGAATTKDTMPA 87
SDSG + P + ++R T PTS + +S G + + P+
Sbjct: 292 SDSGDYSAAPPPLPERRMLNSTNTPTSPTLIVTHAS--------PFASPGRSPSNSPRPS 343
Query: 88 PQRTPVRRRGAVSPATSVESMSTS--VASLASGDEAFRXXXXXXXXXXXXXSTVAAKGAE 145
P+ +P R SP S TS V S A FR S+ A
Sbjct: 344 PKNSP-RTSPRSSPFASPTGSPTSSPVGSPAQSPSVFRRIPPPPLPDSESDSSPPAI--- 399
Query: 146 PSSSYRKRLREGVAMVRTKLIPTMSKLVAQLESRESR 182
P Y+K++ +G + + + P + +LES SR
Sbjct: 400 PERKYKKQITKGKSKAKNPIPPEVRNAERKLESAASR 436
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 18 IAGSMRSTLTSDSGATNPTRPSVGKKRGRRKTPLPTSDDGGASSSSIEVPEKTMAIEVAG 77
+ + ++ T + T TRP G K G T P + A+S++ ++P KT A + +
Sbjct: 6340 VGRTTKAPTTKPASKTTTTRP--GTKAGAAATAKPPT---AAASAAAKIPAKTTAKKTST 6394
Query: 78 AATTK 82
TTK
Sbjct: 6395 TTTTK 6399
>SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 44 RGRRKTPLPTSDDGGASSSS---IEVPEKTMAIEVAGAATTKDTMPAPQRTPVRRRGAVS 100
R +RKTP T+ GA +++ P T A AATT T TP GA +
Sbjct: 177 RAQRKTPAATTPPTGAPAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTP--PTGAPA 234
Query: 101 PATSVESMST 110
T E+ ST
Sbjct: 235 STTPTEAAST 244
>SB_9228| Best HMM Match : GoLoco (HMM E-Value=4.2)
Length = 171
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 21 SMRSTLTSDSGA---TNPTRPSVGKKRGRRKTPLPTSDDGGASSSSIEVPEKTMAIEVAG 77
S R T + S A + PT PS + + + + T+ AS SS + AG
Sbjct: 93 SARKTSSEPSQAWDVSKPTGPSYKQSKSYKNSTTVTTKRSQASPSSSS--SSSSVNSTAG 150
Query: 78 AATTKDTMPAPQRTPVR 94
++ TK PAP P R
Sbjct: 151 SSRTKPAKPAPMAAPRR 167
>SB_47441| Best HMM Match : NOT2_3_5 (HMM E-Value=0)
Length = 584
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 12 PSRCSSIAGSMRSTLTSDSGATNPTRPSVGKKRGRRKTPLPTSDDGGASSSSIEVPEKTM 71
P+ SSIA S + ++ SG + S+G G P P + +S + + E
Sbjct: 282 PTPPSSIATS-QPAVSVPSGMSPALIGSLGTTPGSTPLPPPLLSNSTSSKPPMSLAESLA 340
Query: 72 AIE--VAGAATTKDTMPAPQRTPVRRRGAVSPATSVESMSTSVASLAS 117
A V+ ++ MPAP + + + S S+ + + + ASL +
Sbjct: 341 ASTQPVSSLISSVHLMPAPAQRHITTSDSFSSLKSIAAQAVATASLGN 388
>SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 44 RGRRKTPLPTSDDGGASSSS---IEVPEKTMAIEVAGAATTKDTMPAPQRTPVRRRGAVS 100
R +RKTP T+ GA +++ P T A AATT T TP GA +
Sbjct: 63 RAQRKTPAATTPPTGAPAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTP--PTGAPA 120
Query: 101 PATSVESMST 110
T E+ ST
Sbjct: 121 STTPTEAAST 130
>SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)
Length = 2269
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 30 SGATNPTRPSVGKKRGRR--KTPLPTSDDGGASSSSIEVPEKTMAIEVAGAATTKDTMPA 87
SG NP RP G+ R K+ LP S ++ S + P K ++ T+ D P
Sbjct: 489 SGGQNPLRPLGGQNPPRPPGKSDLPRSVHSIGTTHSTDPPWKRHDLDPNFGWTSSDYSPD 548
Query: 88 PQRTP 92
P R P
Sbjct: 549 PVRPP 553
>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 29.9 bits (64), Expect = 2.1
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 16 SSIAGSMRSTLTSDSGATNPTRPSVGKKRGRRKTPLPTSDDGGASSSSIEVPEKTMAIEV 75
+S+A + T T+ T P + GR P PT+ + +S + PE T A V
Sbjct: 429 ASLATTAPETTTASLLTTAPETTTAXXXXGRGY-PRPTAPETTTASLATTAPETTTASLV 487
Query: 76 AGA---ATTKDTMPAPQRTPVRRRGAVSPATSVESMSTSVASLAS 117
A T + AP+ T S T+ + T+ ASLA+
Sbjct: 488 TTAPETTTAPEATLAPEATTAPEAATASLVTT--APETTTASLAT 530
>SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 11 FPSRCSSIAGSMRSTLTSDSGATNPTRPSVGKK 43
FPS S +A S + S SG PTRPS GKK
Sbjct: 159 FPSSFSPVA----SNIGSSSGQLEPTRPSDGKK 187
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 1/82 (1%)
Query: 23 RSTLTSDSGATNPTRPSVGKKRGRRKTPLPTSDDGGASSSSIEVPEKTMAIEVAGAATTK 82
+ T T+ T PT+P+ G PT+ A+++ + T T
Sbjct: 105 KPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTT 164
Query: 83 DTMPAPQRTPVRRRGAVSPATS 104
T PA TP + PAT+
Sbjct: 165 TTPPA-TTTPTKSTTTTPPATT 185
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 1/93 (1%)
Query: 25 TLTSDSGATNPTRPSVGKKRGRRKTPLPTSDDGGASSSSIEVPEKTMAIEVAGAATTKDT 84
T T+ T PT+P+ PT+ +++ + T T T
Sbjct: 93 TTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTT 152
Query: 85 MPAPQRTPVRRRGAVSPATSVESMSTSVASLAS 117
PA TP + PAT+ + ST+ A+
Sbjct: 153 PPATT-TPTKPTTTTPPATTTPTKSTTTTPPAT 184
>SB_22024| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.2)
Length = 953
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 4/113 (3%)
Query: 8 AAEFPSRCSSIAGSMRSTLTSDSGATNPTRPSVGKKRGRRKTPLPTSDDGGASSSSIEVP 67
+A P R +SI+ R T A + + P + + TP SDD A S + +
Sbjct: 419 SAPMPRRSTSISDLARDLPTPRQAAHSVSLPDLTMVQ----TPARFSDDEQAKPSKLRLD 474
Query: 68 EKTMAIEVAGAATTKDTMPAPQRTPVRRRGAVSPATSVESMSTSVASLASGDE 120
+ + TK P + SP+ + + +T AS+ DE
Sbjct: 475 APKPQSALVTSTKTKAVEPQSVMASKPSSASASPSNTYRTQNTDQASVTEIDE 527
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.1 bits (62), Expect = 3.7
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Query: 21 SMRSTLTSDSGATNPTRPSVGKKRGRRKTP-LPTSDDGGASSSSIEVPEKTMAIEVAGAA 79
S ST ++ S + P+ PS TP P++ ++ S+ P A G
Sbjct: 456 STPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSAPGTPGTP 515
Query: 80 TTKDTMPAPQRTPVRRRGAVSPATSVESMSTSVASLAS 117
+T T AP TP +P+T + S S+ S
Sbjct: 516 STPSTPSAP-GTPSTPSTPSTPSTPSTPSTPSTPSMPS 552
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 21 SMRSTLTSDSGATNPTRPSVGKKRGRRKTP-LPTSDDGGASSSSIEVPEKTMAIEVAGAA 79
SM ST ++ S + P+ P TP +P++ ++ S+ P A
Sbjct: 806 SMPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTP 865
Query: 80 TTKDTMPAPQRTPVRRRGAVSPATSVESMS 109
+T T P+ +TP +P+T+ +S S
Sbjct: 866 STPST-PSTPKTPSTPCTPNTPSTNRKSTS 894
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 59 ASSSSIEVPEKTMAIEVAGAATTKDTMPAPQRTPVRRRGAVSPATSVESMSTSVASLASG 118
A+ + +P+ T A E T T AP+ T + + A T+V STS ++S
Sbjct: 2999 AAPETTTLPKTTAAPETT---TLPKTTAAPETTTLPKTTAAPETTAVHE-STSAPEMSSR 3054
Query: 119 DEAFR 123
EAFR
Sbjct: 3055 TEAFR 3059
>SB_31997| Best HMM Match : zf-C2H2 (HMM E-Value=1.4013e-45)
Length = 1091
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 42 KKRGRRKTPLPTSDDGGASSSSIEVPEKTMAIEVAGAATTKDTMPAPQRTPVRRRGAVSP 101
KKRG++K +P G S E+ M+ +G+ TTK T+ +PQ P R + P
Sbjct: 990 KKRGKKKNRIPRK---GLSDKRGEI----MSGSGSGSDTTKATIASPQPPPRPPRPRLIP 1042
Query: 102 ATSVESMS 109
V S
Sbjct: 1043 VRKVHFKS 1050
>SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22)
Length = 1249
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 49 TPLPTSDDGGASSSSIEVPEKTMAIEVAGAATTKDTMPAPQRTPVRRRGAVSPATSVESM 108
T + T+ D ASS++ VP+ M + + T + P + T VSP S+ ++
Sbjct: 423 TEVTTTHDA-ASSTTSSVPDIYMTLSITTGVYTSLSSPGLKNTTFTPSEIVSP--SISTL 479
Query: 109 STSVASLAS 117
TS L+S
Sbjct: 480 HTSTVELSS 488
>SB_4416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 23 RSTLTSDSGATNPTRPSVGKKRGRRKTPLPTSDD 56
R TLT+ A + P GK R R K P P D
Sbjct: 428 RPTLTTKETAESKVDPQQGKNRARPKPPKPFESD 461
>SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1)
Length = 172
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 8/68 (11%)
Query: 44 RGRRKTPLPTSDDGGASSSSIEVPEKTMAIEVAGAATTKDT-MPAPQRTPVRRRGAVSPA 102
R +RKTP T+ GA P T A AATT T PA P A +P
Sbjct: 110 RAQRKTPAATTPPTGA-------PAATTPPTAAPAATTPPTAAPAATTPPTGAPAATTPP 162
Query: 103 TSVESMST 110
T + +T
Sbjct: 163 TGAPAATT 170
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/77 (23%), Positives = 30/77 (38%)
Query: 28 SDSGATNPTRPSVGKKRGRRKTPLPTSDDGGASSSSIEVPEKTMAIEVAGAATTKDTMPA 87
S + A T P+V + K P+ TS G + +S + + AAT T P
Sbjct: 335 STAKAPGSTEPTVSQSASSPKIPMSTSPTGPSQPNSPTDTQASSKKPTENAATNPKTQPG 394
Query: 88 PQRTPVRRRGAVSPATS 104
+ A++ T+
Sbjct: 395 GPTVTTPKSSALTGVTA 411
>SB_44003| Best HMM Match : DUF658 (HMM E-Value=1.1)
Length = 572
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 30 SGATNPTRPSVGKKRGRRKTPLPTSDDGGASSSSIEVPEKTMAIEVAGAATTKDTMPAPQ 89
+G N T +V KK+ ++TPL + ++ A + E K + + AT K P+
Sbjct: 142 NGIVNSTPSNVLKKKKTKQTPLVSKNETYALTLH-ETKTKKKTKKRSKLATEK-----PR 195
Query: 90 RTPVRRRGAVSPATSVESMSTSVASLAS 117
+ +R + S ++S+ S S+S S S
Sbjct: 196 KNKLRLNSSTSTSSSLSSASSSSLSSCS 223
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 28.3 bits (60), Expect = 6.4
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 26 LTSDSGATNPTRPSVGKKRGRRKTPLPTSDDGGASSSSIEVPEKTMAIEVAGAATTKDTM 85
+T+D+G RP G G P T + S S+ + T VA A KDT
Sbjct: 1770 VTNDAGRRIVLRPDKGNPHGFPMEPRSTMEVTLMSMST----DATPIAPVAFKAYDKDTK 1825
Query: 86 PAPQRTPVRRRGAVSPATSVESMSTSVAS 114
+ R V+P S+E +T V S
Sbjct: 1826 TPFEINNSERPFLVTPVESMEDFTTMVVS 1854
>SB_43809| Best HMM Match : PSGP (HMM E-Value=0.069)
Length = 932
Score = 28.3 bits (60), Expect = 6.4
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 3/109 (2%)
Query: 12 PSRCSSIAGSMRSTLTSDSGATNPTRPSVGKKRGRRKTP-LPTSDDGGASSSSIEVPE-- 68
P+ + IA +++ A P + R T +P S D ++S+ +P
Sbjct: 692 PTSATPIATDKQASKQVTPTAAIPIATDIQASRKASSTATIPGSKDSQPATSTATIPRAT 751
Query: 69 KTMAIEVAGAATTKDTMPAPQRTPVRRRGAVSPATSVESMSTSVASLAS 117
T A + A +A T PQ + A P ++ +S VAS A+
Sbjct: 752 NTQAPKTASSANTIPRNTDPQASKTAISTATIPRSADAPVSKQVASTAT 800
>SB_41306| Best HMM Match : Ribosomal_L19e (HMM E-Value=8.5)
Length = 220
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 1 MKEAVRRAAEFPSRCSSIAGSMRSTLTSDSGATNPTRPSVGKKRGRRKTPLPTSDDG 57
++E RR+ E P R +A S RS + S + +G RG R+ P + G
Sbjct: 48 IREICRRSGEIPWRKCVVAHSSRSRVLGSSNTKQSSEQVIG--RGHRECRQPRLEGG 102
>SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8)
Length = 361
Score = 28.3 bits (60), Expect = 6.4
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Query: 41 GKKRGRRKTPLPTSDDGGASSSSIEVPEKTMAIEVAGAATTKDT------MPAPQRTPVR 94
GKK ++K P + D+ A+ S+ K A + A + T++++ MP+ TP R
Sbjct: 185 GKKEEQKKAPPQSLDEFMANISTKRPDAKPPAAKKATSPTSEESFQFGGYMPSAASTPGR 244
Query: 95 RRGAVS-PATSVESMSTSV--ASLASGDEAFRXXXXXXXXXXXXXSTVAAKGAEPSSSYR 151
R +S P T+ S SV A D+ V+++GA+ S + R
Sbjct: 245 ARTGISRPDTAPGSGRRSVRFADDLGLDDDILGSSRPRTAPSNRGRAVSSRGADESETER 304
>SB_26457| Best HMM Match : Band_41 (HMM E-Value=0.0026)
Length = 453
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 143 GAEPSSSYRKRLREGVAMVRTKLIPTMSKLVAQLESRESRILEDSPVLREGTPLSPMPAL 202
GAE SSS R RE A + + M KL + E ++++ + E P +P
Sbjct: 185 GAESSSSSRAAEREMAAALLARREALMEKLRQKTEELRDICIQEAEFIGEYPPETPYTVG 244
Query: 203 AHSGPPARKMDTN 215
+ P R++ T+
Sbjct: 245 SPLPPIRRRVGTS 257
>SB_19564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/95 (25%), Positives = 33/95 (34%), Gaps = 4/95 (4%)
Query: 13 SRCSSIAGSMRSTLTSDSGA----TNPTRPSVGKKRGRRKTPLPTSDDGGASSSSIEVPE 68
SR + AGS + SG P R S+ + K P D+ SS + P
Sbjct: 336 SRRIASAGSSQGVTPRQSGTPTQGAQPKRRSIAMPGSQVKKPARNCDETSVGSSEVSTPR 395
Query: 69 KTMAIEVAGAATTKDTMPAPQRTPVRRRGAVSPAT 103
K +A + T PQ +G V T
Sbjct: 396 KGRRSLLATPRSASKTSSKPQSGMGSPQGMVKMRT 430
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/85 (21%), Positives = 29/85 (34%)
Query: 60 SSSSIEVPEKTMAIEVAGAATTKDTMPAPQRTPVRRRGAVSPATSVESMSTSVASLASGD 119
++SSI P KT + V AATT V+ +V + +T+ +
Sbjct: 1097 AASSITTPLKTTVVAVTAAATTTAATTIAAAVTASTASVVTTTATVAAATTTAEKATTTT 1156
Query: 120 EAFRXXXXXXXXXXXXXSTVAAKGA 144
A ++V K A
Sbjct: 1157 AAMVKATTTAAAVTASTASVVTKTA 1181
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 49 TPLPTSDDGGASSSSIEVPEKTMAIEV--AGAATTKDTMPAPQRTPVRRRGAVSPATSVE 106
T P S DG ++ SS+E T+ AA+++ T P + TP S T+
Sbjct: 727 TAAPMSTDGTSTISSVETTPSTIFPRTIFPVAASSRTTSPV-ETTPGTAAPMSSDGTTAL 785
Query: 107 SMSTSVASLA 116
SMST + A
Sbjct: 786 SMSTDETTAA 795
>SB_13376| Best HMM Match : DUF1213 (HMM E-Value=0.18)
Length = 1022
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 73 IEVAGAATTKDTMPAPQRTPVRRRGAVSPATSVESMSTSVASLASGDE 120
I+ A A ++D M + PV R A+ SV TS+ A GD+
Sbjct: 736 IDSAQVAQSRDDMGNNKSNPVTMRPALETRRSVPLWKTSIRGNAKGDK 783
>SB_37674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 50 PLPTSDDGGASSSSIEVPEKTMAIEVAGAATTKDTMPAPQRTPVRRRGAVSPATSVESMS 109
P P ++D SSS P++ + + G+ T DT Q +P + SP + E+
Sbjct: 447 PAPDAEDKPKSSSGTSTPKEGVP-KTIGSTTAADT--TAQASPAQDVNRKSPVSEAEAPK 503
Query: 110 TSVA 113
S A
Sbjct: 504 PSAA 507
>SB_22693| Best HMM Match : DUF1042 (HMM E-Value=0.00027)
Length = 2261
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 13 SRCSSIAGSMRSTLTSDSGATNPTRPSVGKKRGRR-KTPLPTSDDGGASSSS 63
S S G+ + GA+ P P +K ++ ++P PTS GG+ S S
Sbjct: 1155 SDSKSEKGTKSAKSAKSKGASTPGSPKSRQKTVKKDRSPSPTSKKGGSKSRS 1206
>SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 27.9 bits (59), Expect = 8.5
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 38 PSVGKKRGRRKTPLPTSDDGGASSSSIEVPEKTMAIEV----AGAA----TTKDTMPAPQ 89
P V R +R+TP + S + P+K I V AG+A TTK P P+
Sbjct: 106 PPVSTPRQQRRTPSSFTPRSSISRRRSDTPKKRRRISVSRRRAGSALGRLTTKKKTP-PR 164
Query: 90 RTPVRRRGAVSPATSVESMSTSVA 113
RT + + T S S+S++
Sbjct: 165 RTNLLEAFRAATCTPAGSRSSSIS 188
>SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 27.9 bits (59), Expect = 8.5
Identities = 52/209 (24%), Positives = 72/209 (34%), Gaps = 23/209 (11%)
Query: 9 AEFPSRCSSIAGSMRSTLTSDSG--ATNPTRPSVGKKRGRR-KTPLPTS-----DDGG-- 58
A F S R D G P +P GKKRGR+ KT S D GG
Sbjct: 2283 ANFDPTLSEKPPKKRRRRKEDKGEKGEKPEKPPTGKKRGRKPKTAKLGSAGQPGDSGGTP 2342
Query: 59 -ASSSSIEVPEKTMAIEVAG-AATTKDTMPAPQRTPVR-RRGAVSPATSVESMSTSVASL 115
S + + + + G +P P +PVR RG +S MS+
Sbjct: 2343 HGESMGYDWTGQPLPPRIRGNGEAVVPGLPPPLTSPVRDERGLMSQPLPHNKMSSDKLIA 2402
Query: 116 ASGDEAFRXXXXXXXXXXXXXSTVAAKGAEPSSSYRKRLREGVAMVRTKLIPTMSKLVAQ 175
E R A+ E + +Y VA KL+ L +
Sbjct: 2403 VIDRETGRKSFVQLSGNGAPTLKSLAEWLERNRAY------DVAEESAKLVLEEGNLPSN 2456
Query: 176 LESRESRILEDSPVLREGTPLSPMPALAH 204
L +R + SP ++ TP S P+ AH
Sbjct: 2457 LLTR----VPKSPRPKQTTPSSANPSSAH 2481
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 8 AAEFPSRCSSIAGSMRSTLTSDSGATNPTRPSVGKKRGRRKTPLPTSDDGGASSSSIEVP 67
A P+ + + R+T +++SG+T + SVG T TS GGA+S P
Sbjct: 490 ANTIPTPVTHTGPTARTTFSTNSGSTMGST-SVGTSGPGGSTSGGTSGPGGATSGGTSGP 548
Query: 68 EKTMAIEVAGAATTKDTMP 86
+G +T +P
Sbjct: 549 GGATLGGTSGVSTAPTAVP 567
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.309 0.123 0.337
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,331,286
Number of Sequences: 59808
Number of extensions: 276712
Number of successful extensions: 958
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 881
Number of HSP's gapped (non-prelim): 117
length of query: 251
length of database: 16,821,457
effective HSP length: 80
effective length of query: 171
effective length of database: 12,036,817
effective search space: 2058295707
effective search space used: 2058295707
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 59 (27.9 bits)
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