GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001112-TA|BGIBMGA001112-PA|undefined
         (251 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive ...    28   0.23 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    27   0.69 
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    24   4.9  

>AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR20 protein.
          Length = 175

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 46  RRKTPLPTSDDGGASSS-SIEVPEKTMAIEVAGAATTKDTMPAPQRTPV 93
           ++ T +P   DG A    +I  P  T +   AG     DT  A +R PV
Sbjct: 58  KQATTIPPITDGDADDQVTIVPPSSTASPTTAGDGDANDTQQASKRPPV 106


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
          protein.
          Length = 724

 Score = 26.6 bits (56), Expect = 0.69
 Identities = 15/40 (37%), Positives = 20/40 (50%)

Query: 53 TSDDGGASSSSIEVPEKTMAIEVAGAATTKDTMPAPQRTP 92
          +SDD   +S+ I +PE     E A AA   +   A Q TP
Sbjct: 44 SSDDDELNSTIIAMPEPASECEAAEAAMDLEPPAAAQPTP 83


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 16/52 (30%), Positives = 22/52 (42%)

Query: 70  TMAIEVAGAATTKDTMPAPQRTPVRRRGAVSPATSVESMSTSVASLASGDEA 121
           T A  VA AA    T PA          A + A +  +   + A+LA+G  A
Sbjct: 202 TNAASVATAAPAAITAPAANAASTAAAPAAATAHAATASPVATAALAAGAPA 253


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.309    0.123    0.337 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,771
Number of Sequences: 2123
Number of extensions: 7418
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 3
length of query: 251
length of database: 516,269
effective HSP length: 62
effective length of query: 189
effective length of database: 384,643
effective search space: 72697527
effective search space used: 72697527
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 47 (23.0 bits)