Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001111-TA|BGIBMGA001111-PA|IPR013151|Immunoglobulin,
IPR003961|Fibronectin, type III, IPR008957|Fibronectin, type III-like
fold, IPR007110|Immunoglobulin-like
(249 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 38 5e-05
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 22 3.9
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 22 3.9
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 22 5.1
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 21 8.9
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 21 8.9
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 8.9
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 21 8.9
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 21 8.9
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 38.3 bits (85), Expect = 5e-05
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 16/128 (12%)
Query: 9 EPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEP---SKFTVD-----NIGRSVLTYTATT 60
+PA ++C+ P W +NN +EP +++T+ N S L+ T
Sbjct: 812 DPAVLQCEAKG-EKPIGILWNINNKR----LEPKGDNRYTIREEILANGVLSGLSIKRTE 866
Query: 61 ESDYGSLTCRATNMAGQQMDPCRYTLLPAVKPDQPFNCTTLNLTDDSAELRCVAGYDGGL 120
SD TC ATN G D ++ P+ P+ L+ + S +L VA +DG
Sbjct: 867 RSDSALFTCVATNAFGS--DDTSINMIVQEVPEVPYGLKVLDKSGRSVQLSWVAPFDGNS 924
Query: 121 H-TTYIVE 127
T Y++E
Sbjct: 925 PITRYMIE 932
Score = 29.1 bits (62), Expect = 0.034
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 6 AINEP--ASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGR--SVLTYTATTE 61
+INE SV+C V P N WTLN +D + + ++ + S L+
Sbjct: 614 SINEGDGVSVQCTVSKGDYPLNISWTLNGHF--ID-QTNGIVINRASKRVSTLSIDNVQS 670
Query: 62 SDYGSLTCRATNMA 75
+ G+ TC A+N A
Sbjct: 671 THVGNYTCLASNSA 684
Score = 24.2 bits (50), Expect = 0.96
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 9/109 (8%)
Query: 11 ASVKCDVDAFP-PPKNFQWTLNNSMGTV-DIEPSKFTVDNIGRSVLTYTATTESDYGSLT 68
A+V+C D FP P ++ S G D +P+ + + LT +++ G
Sbjct: 716 AAVECKADGFPRPVVTWKRATGVSPGDYKDFKPNNPDI-KVEDGTLTINNIQKTNEGYYL 774
Query: 69 CRATNMAGQQMDPCRYTLLPAVKPDQPFNCTTLNLTD---DSAELRCVA 114
C A N G + + +V+ F+ N T D A L+C A
Sbjct: 775 CEAVNGIGSGLSA---VIQISVQAPPQFDIKLRNQTSRRGDPAVLQCEA 820
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 22.2 bits (45), Expect = 3.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 32 NSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYG 65
+S V++ KF NIG + ATTE + G
Sbjct: 341 SSRQAVNLICDKFERSNIGVKIALEAATTEREGG 374
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 22.2 bits (45), Expect = 3.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 32 NSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYG 65
+S V++ KF NIG + ATTE + G
Sbjct: 341 SSRQAVNLICDKFERSNIGVKIALEAATTEREGG 374
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 214 TISLALWARRR 224
T+ LALW RRR
Sbjct: 55 TVLLALWTRRR 65
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 129 WETGNLIANVSSSVPVWKLGD 149
++ GN +AN+++ P W L D
Sbjct: 273 FQGGNQLANLANWGPEWNLLD 293
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 129 WETGNLIANVSSSVPVWKLGD 149
++ GN +AN+++ P W L D
Sbjct: 274 FQGGNQLANLANWGPEWNLLD 294
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 129 WETGNLIANVSSSVPVWKLGD 149
++ GN +AN+++ P W L D
Sbjct: 274 FQGGNQLANLANWGPEWNLLD 294
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 21.0 bits (42), Expect = 8.9
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 70 RATNMAGQQMDPCR 83
RA + G Q DPC+
Sbjct: 17 RAQQLKGNQEDPCK 30
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 174 LRVHTLSRLALHTEAKTTEVQIDRNW 199
LR++ L+R A + E + NW
Sbjct: 576 LRIYELARKAAFAHLNSNEARATLNW 601
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.317 0.131 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,652
Number of Sequences: 317
Number of extensions: 2106
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 11
length of query: 249
length of database: 114,650
effective HSP length: 55
effective length of query: 194
effective length of database: 97,215
effective search space: 18859710
effective search space used: 18859710
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)
- SilkBase 1999-2023 -