Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001111-TA|BGIBMGA001111-PA|IPR013151|Immunoglobulin,
IPR003961|Fibronectin, type III, IPR008957|Fibronectin, type III-like
fold, IPR007110|Immunoglobulin-like
(249 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30961| Best HMM Match : I-set (HMM E-Value=0) 40 0.003
SB_10900| Best HMM Match : I-set (HMM E-Value=0) 39 0.003
SB_56996| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_5575| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_45852| Best HMM Match : I-set (HMM E-Value=0) 36 0.032
SB_8817| Best HMM Match : I-set (HMM E-Value=0) 36 0.032
SB_37927| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 35 0.055
SB_29237| Best HMM Match : I-set (HMM E-Value=0) 34 0.096
SB_8388| Best HMM Match : ig (HMM E-Value=8.80001e-41) 34 0.13
SB_49916| Best HMM Match : ig (HMM E-Value=8.5e-06) 33 0.17
SB_45516| Best HMM Match : I-set (HMM E-Value=1.1e-26) 33 0.17
SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_2034| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_19226| Best HMM Match : I-set (HMM E-Value=0) 33 0.22
SB_23359| Best HMM Match : I-set (HMM E-Value=0) 33 0.29
SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_10860| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_50833| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1.1e-08) 32 0.51
SB_52846| Best HMM Match : ig (HMM E-Value=9e-12) 31 0.68
SB_12096| Best HMM Match : ig (HMM E-Value=9.4e-33) 31 0.68
SB_8819| Best HMM Match : I-set (HMM E-Value=0) 31 0.68
SB_43700| Best HMM Match : SRCR (HMM E-Value=0) 31 0.90
SB_12208| Best HMM Match : ig (HMM E-Value=6.9e-30) 31 0.90
SB_8703| Best HMM Match : rve (HMM E-Value=1.5e-22) 31 0.90
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 31 1.2
SB_54662| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23) 30 2.1
SB_41626| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_26711| Best HMM Match : I-set (HMM E-Value=0) 30 2.1
SB_50854| Best HMM Match : ig (HMM E-Value=6.1e-27) 29 2.7
SB_47305| Best HMM Match : I-set (HMM E-Value=0) 29 2.7
SB_50799| Best HMM Match : I-set (HMM E-Value=0) 29 3.6
SB_42485| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 3.6
SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_33752| Best HMM Match : I-set (HMM E-Value=3.7e-15) 29 3.6
SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_51604| Best HMM Match : I-set (HMM E-Value=2.3e-21) 29 3.6
SB_10606| Best HMM Match : I-set (HMM E-Value=0) 29 3.6
SB_5223| Best HMM Match : fn3 (HMM E-Value=3.2e-27) 29 4.8
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_30548| Best HMM Match : I-set (HMM E-Value=2.1e-11) 28 6.3
SB_6364| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_30292| Best HMM Match : fn3 (HMM E-Value=1.2e-12) 28 8.4
SB_11883| Best HMM Match : I-set (HMM E-Value=0) 28 8.4
SB_5198| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_37776| Best HMM Match : fn3 (HMM E-Value=1.4e-22) 28 8.4
SB_28651| Best HMM Match : ig (HMM E-Value=1.4e-09) 28 8.4
SB_26428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_30961| Best HMM Match : I-set (HMM E-Value=0)
Length = 1018
Score = 39.5 bits (88), Expect = 0.003
Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 15/123 (12%)
Query: 5 AAINEPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDY 64
A INE +KC DA P P +++ +N GT TV + T++D
Sbjct: 594 AVINETLVLKCLADAVPQPSRYKFKVN---GT--------TVTESSNATRVIHRVTKADQ 642
Query: 65 GSLTCRATNMAGQQMDPCRYTLL---PAVKPDQPFNCTTLNLTDDSAELRCVAGYDGGLH 121
GS C A N+ G Y + P + P T+N T DS L+C A D +
Sbjct: 643 GSHECAAYNIMGWGKAAQLYVRVYERPRITAISPDVSVTINRT-DSVTLKCHASGDPAPN 701
Query: 122 TTY 124
T+
Sbjct: 702 ITW 704
Score = 34.3 bits (75), Expect = 0.096
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 39 IEPSKFTVDNIGRSVLTYTATTESDYGSLTCRATNMAGQQMDPCRYTLLPAVKPDQP-FN 97
I K + NIG SV SD G+ TC ATN GQ T+ KPD +
Sbjct: 532 INQGKVLLRNIGGSVFQVGKNNRSDAGTYTCSATNYLGQTHG--NTTVDIQYKPDDSRLS 589
Query: 98 CTTLNLTDDSAELRCVA 114
+ + +++ L+C+A
Sbjct: 590 IHDIAVINETLVLKCLA 606
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 12 SVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTCRA 71
++ CDV+ P P + W+ S ++ P + RSVL D+G C A
Sbjct: 755 NLTCDVEGGPLP-SVTWSRKRSQFSIIFSPVRM------RSVLEVIPKQSRDFGDYICMA 807
Query: 72 TNMAG 76
N+ G
Sbjct: 808 RNIMG 812
>SB_10900| Best HMM Match : I-set (HMM E-Value=0)
Length = 1642
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 6 AINEPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYG 65
A+ A + C D PPP T S G+V I ++ TV G ++T T D G
Sbjct: 489 ALGATARLDCQADGDPPPL---MTWETSQGSV-IGQARHTVAANGTLIITMA--TAGDTG 542
Query: 66 SLTCRATNMAGQQMDPCRYTL 86
LTC ATN AG + T+
Sbjct: 543 WLTCTATNAAGSTVKKAYLTI 563
Score = 31.1 bits (67), Expect = 0.90
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 23/171 (13%)
Query: 9 EPASVKCD-VDAFPPPKNFQWTL-NNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGS 66
E + VK D + A P + W L + ++ TV S+ V + L TES+YG
Sbjct: 314 EFSEVKLDCLVAGDPTPSVSWILPSGAIATVTSPASRVQV--LANHTLVIGNATESEYGE 371
Query: 67 LTCRATNMAGQQMDPCRYTLLPAVKPDQPFNCTTLNLT---DDSAELRCVAGYDGGLHTT 123
C A N G++ ++L FN LN++ D+ + C + + H
Sbjct: 372 YVCVAKNSVGEKTRKVTVSILTV----PSFNSQLLNISRPIRDNVTIMCPSRGNPSPH-- 425
Query: 124 YIVEVWETGNLIANVSSSVPVWKLGDLGSGKALKLYFYAH--NARGRSDIT 172
+W G I + S ++ + L G Y+ H N+ G ++++
Sbjct: 426 ---HLWTFGGKILSQSRTLSLVSLNVTNRG-----YYTCHLNNSMGSAELS 468
>SB_56996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/27 (62%), Positives = 18/27 (66%)
Query: 50 GRSVLTYTATTESDYGSLTCRATNMAG 76
G SVLT T +E DYGS TCRA N G
Sbjct: 67 GGSVLTVTTRSEQDYGSYTCRAVNSVG 93
>SB_5575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 37.5 bits (83), Expect = 0.010
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 8 NEPASVKCDVDAFPPPKNFQWT-LNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGS 66
N A V C FP P WT + NSM +PS+ + D+ LT SD G+
Sbjct: 155 NSTAVVPCISTGFPAPV-INWTKIENSM-----DPSRMSYDS---RALTIKDVRLSDVGT 205
Query: 67 LTCRATNMAGQ 77
C ATN+AGQ
Sbjct: 206 YVCSATNVAGQ 216
>SB_45852| Best HMM Match : I-set (HMM E-Value=0)
Length = 1122
Score = 35.9 bits (79), Expect = 0.032
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 12 SVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTCRA 71
S+ C V+ PPPK W N + + D KFT+ V + D G +CRA
Sbjct: 157 SIICPVEGLPPPK-VTWAKNGPIASGD----KFTIARSTDLVFNSGKASVFDSGRYSCRA 211
Query: 72 TNMAGQ 77
N GQ
Sbjct: 212 VNNLGQ 217
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 13 VKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVD-NIGRSVLTYTATTESDYGSLTCRA 71
++C P P W +N S T E VD N G L+ T + G C++
Sbjct: 373 LQCPSIGTPKPA-VTWFINGSAVT---ESDTLKVDPNTG--ALSIIEITAEEQGQYMCKS 426
Query: 72 TNMAGQQMDPCRYTLLPAVKP 92
N+AG+ ++ T++ V P
Sbjct: 427 KNIAGEDLETSYTTVVGPVAP 447
>SB_8817| Best HMM Match : I-set (HMM E-Value=0)
Length = 2526
Score = 35.9 bits (79), Expect = 0.032
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 22 PPKNFQWTLNNSMGTVDIEPSKFTVDNIG-RSVLTYTATTESDYGSLTCRATNMAG 76
P NF+WT ++ +D S++T + + R L + + SD G+ C ATN G
Sbjct: 801 PEPNFKWTKDDE--DIDFRSSQYTFERVDDRLTLIVKSPSPSDQGTYKCTATNKGG 854
>SB_37927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 35.5 bits (78), Expect = 0.042
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 7 INEPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGS 66
+ E +V C P P W N + + + N G +LT A T+SD G+
Sbjct: 527 VGESHTVTCQFQGSPAPL-VTWFFKNDTADQTVPSTLNYIINGG--ILTIKAVTKSDEGT 583
Query: 67 LTCRATNMAG 76
C+ TN AG
Sbjct: 584 FVCKGTNPAG 593
Score = 31.1 bits (67), Expect = 0.90
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Query: 15 CDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTCRATNM 74
C +P P + W +N ++ + T+ + G L+ T SD GS +C ATN+
Sbjct: 446 CAATGYPMP-SVLWLKDNQA----VDTNHVTLHSNGS--LSITRVLFSDRGSYSCVATNV 498
Query: 75 AGQQMDPCRYTL-LPAVKPDQPFNCTTL 101
AG T+ +P +P N T +
Sbjct: 499 AGSASSVATLTVQVPPTVSGRPTNATRI 526
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 35.1 bits (77), Expect = 0.055
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
Query: 9 EPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFT-VDNIGRSVLTYTATTESDYGSL 67
+ A + C + P P +W VD+ +K D++ + LT T D G
Sbjct: 1105 DEAKLVCKITGSPTP-TVEW-FKEKAKVVDVRRTKMEYTDDV--ATLTIPTTRPEDKGMY 1160
Query: 68 TCRATNMAGQQMDPCRYTLLPAVKPDQPFNCTTLNLTDDS 107
C A N G+ + P VKPD + +T++S
Sbjct: 1161 KCVAKNDFGEASTSATLHINPVVKPDFKTKLKPMEVTEES 1200
>SB_29237| Best HMM Match : I-set (HMM E-Value=0)
Length = 869
Score = 34.3 bits (75), Expect = 0.096
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 9 EPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLT 68
+P + CDV P P W+L + P+K+ + + L T D G+ T
Sbjct: 334 QPFTFACDVKGLPKP-TISWSLADGKSL----PAKYDMKG---TALRNNKTAMEDSGNFT 385
Query: 69 CRATNMAGQQMDPCRYTL-LPAVKPDQP 95
C A+N AG++ + + P V ++P
Sbjct: 386 CTASNTAGKKSQTVQIIISQPPVLTEEP 413
>SB_8388| Best HMM Match : ig (HMM E-Value=8.80001e-41)
Length = 666
Score = 33.9 bits (74), Expect = 0.13
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 10 PASVKCDVDAFPPPKNFQWTLN-NSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLT 68
P ++ C VD+ P + QWT +++G V + N+ S+ TT+ D GS T
Sbjct: 306 PVTLTCMVDSVTPFR-VQWTKGRDALGPVLTRVGQV---NVTHSI---RVTTDRDEGSYT 358
Query: 69 CRATNMAGQQMDPCRYTL-LPAVKPDQPFNCTTLNLTDDSAELRCVA 114
C A+N G + R + +P Q + T T D+ LRC++
Sbjct: 359 CFASNAGGTAIAVTRLVVKVPVPVLIQRDDGTLTVKTGDTIVLRCLS 405
>SB_49916| Best HMM Match : ig (HMM E-Value=8.5e-06)
Length = 465
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 51 RSVLTYTATTESDYGSLTCRATNMAGQ 77
+S+ T T TT YG+ TC A+N+AG+
Sbjct: 48 QSIYTITITTRYQYGNYTCEASNIAGK 74
>SB_45516| Best HMM Match : I-set (HMM E-Value=1.1e-26)
Length = 939
Score = 33.5 bits (73), Expect = 0.17
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 3 VGAAINEPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTES 62
V A I A++ C D P PK +T N+ G + + + G+ LT TA S
Sbjct: 474 VAAWIGYRATLDCYADGNPLPK---YTWRNASGVIAVSETG------GK--LTVTAHDNS 522
Query: 63 DYGSLTCRATNMAGQQMDPCRYTLLPAVKP 92
+G TC A+N G+ D TL+ KP
Sbjct: 523 AFGDYTCEASNSRGR--DSHTVTLIKVGKP 550
>SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 13 VKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTCRAT 72
++C + +P P ++QW + + +D + T+ + L + ESD G+ TCR T
Sbjct: 178 IRCSAEGYPTP-HYQWYKDWNPTVLDYSDDRLTL--LPNGSLLISNVQESDSGNYTCRIT 234
Query: 73 NM 74
+
Sbjct: 235 QL 236
Score = 31.1 bits (67), Expect = 0.90
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 57 TATTESDYGSLTCRATNMAGQQMDPCRYTLLPAVKPDQPFNCTTLNLTDDSAELRCVAGY 116
T T++ D+G CRA+N G + L A PD P N +T+ + +
Sbjct: 316 TVTSDEDFGDYECRASNELGNATHIVQ--LKQAGGPDSPTNISTVVHCGYISVTWDSPLF 373
Query: 117 DGGLHT-TYIVEVWETGNLI 135
DGGL Y VE+ GNL+
Sbjct: 374 DGGLPIFMYEVELLR-GNLV 392
>SB_2034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1003
Score = 33.5 bits (73), Expect = 0.17
Identities = 43/192 (22%), Positives = 70/192 (36%), Gaps = 20/192 (10%)
Query: 10 PASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTC 69
P ++KC P P V + K G + L + SD+G+ C
Sbjct: 273 PVTIKCQFTGLPMPT-----------VVMTKDGKEVAKGNGTAQLDVVTSVTSDFGTFIC 321
Query: 70 RATNMAGQQMDPCRYTLLPAVKPDQPFNCTTLNLTDDSAELRCV-AGYDGGLH-TTYIVE 127
A N G++++ L AV P +P + N T D+ L DGG++ YI+
Sbjct: 322 EANNKRGRKLN--NIMLKMAVPPGKPLD-VKANKTCDTITLSWKHPASDGGMYIEDYIIS 378
Query: 128 VWETGNLIANVSSSVPVWKL-GDLGSGKALKLYFYAHNARGRSDITKLRVHTLSRLALHT 186
V A + ++KL + A N G + L + T + + +
Sbjct: 379 VGSRKE--ATIDDKKQMFKLESKFQRNTKYNVSIQARNKAGPGERETLYI-TTDKYCIPS 435
Query: 187 EAKTTEVQIDRN 198
K T Q + N
Sbjct: 436 PPKITSKQTESN 447
>SB_19226| Best HMM Match : I-set (HMM E-Value=0)
Length = 1500
Score = 33.1 bits (72), Expect = 0.22
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 10 PASVKCDVDAFPPPKNFQWTLNN--SMGTVD--IEPSKFTVDNIGRSVLTYTATTESDYG 65
P + C+V A P P++ QW ++ G D I T + S L+ TA + +D G
Sbjct: 672 PLQITCEVSAIPYPRDVQWYHDDIPLTGGHDYIITAMPGTKRSSRLSKLSRTAVSMADSG 731
Query: 66 SLTCRATNMAG 76
C A+N AG
Sbjct: 732 EYKCVASNAAG 742
Score = 31.1 bits (67), Expect = 0.90
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 8/81 (9%)
Query: 12 SVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTCRA 71
S+ C FPPP W+ + D S +DN L +SD G TC A
Sbjct: 774 SLPCRAKGFPPPV-ITWSRSGQTIPYDRRQS---IDN---GTLLIGNVQKSDSGKYTCTA 826
Query: 72 TNMAGQQMDPCRYTLLPAVKP 92
N AG++ D T+ V P
Sbjct: 827 VNTAGER-DSVTMTVSIVVSP 846
>SB_23359| Best HMM Match : I-set (HMM E-Value=0)
Length = 367
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 9 EPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLT 68
E +C V+A PP W+ + ++ T I +VL +SD G
Sbjct: 21 ETVVFRCAVNAGMPPPFITWSRDGQ--PINNTQDNSTAHVIEGNVLKIAHAFDSDSGRYA 78
Query: 69 CRATNMAG 76
CRATN+ G
Sbjct: 79 CRATNLLG 86
>SB_5639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1384
Score = 32.7 bits (71), Expect = 0.29
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 13 VKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTCRAT 72
V+C V P P W + +K DN S L + T+ D GS TC A
Sbjct: 595 VRCPVKTRPEP-GLSWRIRGLAFDPKTSRAKLQNDN---STLLLSGLTKDDAGSYTCIAR 650
Query: 73 NMAGQQMDPCRYTLLPAVKPDQP 95
N AG+ + T + P +P
Sbjct: 651 NNAGKDQ---KVTNIQVADPQKP 670
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/69 (26%), Positives = 27/69 (39%)
Query: 47 DNIGRSVLTYTATTESDYGSLTCRATNMAGQQMDPCRYTLLPAVKPDQPFNCTTLNLTDD 106
DN GR +L T+ GS C A+N+ G ++ A +P F L D
Sbjct: 1128 DNSGRDILIIAQVTKDVSGSYECVASNVGGADRVATSIQVIEAQQPVIEFISKRLQSLKD 1187
Query: 107 SAELRCVAG 115
+ + G
Sbjct: 1188 LSAVTATIG 1196
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 9/67 (13%)
Query: 12 SVKCDVDAFPPPKNFQWTLNNSMGTVDIEPS-KFTVDNIGRSVLTYTATTESDYGSLTCR 70
++ C P P + W +NN+ ++ P +F V LT + D G++ C
Sbjct: 705 TIICPTRGLPAP-DVTWEMNNT----NVRPGGRFVVQE---GTLTIRNLVKQDQGNIRCV 756
Query: 71 ATNMAGQ 77
A N AGQ
Sbjct: 757 ARNAAGQ 763
>SB_10860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1292
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 24 KNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYG 65
+ F TL+N +GT++++ K D + R V Y AT S G
Sbjct: 1020 ERFNRTLHNMLGTLEVDKKKDWPDYVARLVHAYNATKHSTTG 1061
>SB_50833| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1.1e-08)
Length = 280
Score = 31.9 bits (69), Expect = 0.51
Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 8/92 (8%)
Query: 3 VGAAINEPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATT-- 60
V + + A +KC D P P+ W + ++ + +DN V T T
Sbjct: 30 VHTSAGQQAMLKCFYDGIPRPQAI-W-MREGKQLLECKNCVTHIDNTKHGVTTLRVTPYR 87
Query: 61 ESDYGSLTCRATNMAGQQMDPCRYTLL--PAV 90
ESDYG C+ N G D TL+ PAV
Sbjct: 88 ESDYGDYICKVRNENG--FDSVTITLVEQPAV 117
>SB_52846| Best HMM Match : ig (HMM E-Value=9e-12)
Length = 330
Score = 31.5 bits (68), Expect = 0.68
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 13 VKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTCRAT 72
+KCD +A P N W+ ++ + ++ ++++ G S L T ++D G TC+AT
Sbjct: 189 IKCDSNA-APAANHVWSKDDQVLSIS---GRYSLGP-GNS-LVITPVQQNDEGKYTCKAT 242
Query: 73 NMAG 76
N+ G
Sbjct: 243 NLLG 246
>SB_12096| Best HMM Match : ig (HMM E-Value=9.4e-33)
Length = 942
Score = 31.5 bits (68), Expect = 0.68
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 13 VKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTCRAT 72
+KCD +A P N W+ ++ + ++ ++++ G S L T ++D G TC+AT
Sbjct: 773 IKCDSNA-APAANHVWSKDDQVLSIS---GRYSLGP-GNS-LVITPVQQNDEGKYTCKAT 826
Query: 73 NMAG 76
N+ G
Sbjct: 827 NLLG 830
>SB_8819| Best HMM Match : I-set (HMM E-Value=0)
Length = 1789
Score = 31.5 bits (68), Expect = 0.68
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 9 EPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSV-LTYTATTESDYGSL 67
E AS ++ P PK W + G V E + +IG + +T TT D G+
Sbjct: 1536 EEASTSLEIQGKPKPK-VTWYKD---GKVLRETRNIQLMSIGNTYSVTIIRTTPDDVGTY 1591
Query: 68 TCRATNMAG 76
C ATN AG
Sbjct: 1592 MCEATNKAG 1600
>SB_43700| Best HMM Match : SRCR (HMM E-Value=0)
Length = 967
Score = 31.1 bits (67), Expect = 0.90
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 11 ASVKCDV-DAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTC 69
A+++C V + PP ++ W + P+ +V + GR +L + +D GS TC
Sbjct: 608 ATLRCSVIRSQPPVLSYTWRKDGLTFNPATHPN-VSVTHGGRDLL-FAPVYRTDQGSYTC 665
Query: 70 RATNMAGQQMD-PCRYTL-LPAVKPDQPFNCTTLNLTDDSAELRC---VAGYDGGLHTTY 124
A+N G + R T+ P V P D+A L+C V+G T+
Sbjct: 666 EASNSVGNGISLASRMTIHYPPVTSVSPLEAK----EGDNATLKCSVLVSGRPPATSFTW 721
Query: 125 IVE 127
I E
Sbjct: 722 IKE 724
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 12 SVKCDVDAFPPPK-NFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTCR 70
+++C V++ P ++ W + + + P + + GR L + +D G+ TC
Sbjct: 891 TLRCTVESSQPSVGSYTWLKDGAEINLATHP-RVRAERGGRD-LVFAPVGRADQGNYTCE 948
Query: 71 ATNMAGQQMDP 81
ATN G P
Sbjct: 949 ATNSVGSGTSP 959
>SB_12208| Best HMM Match : ig (HMM E-Value=6.9e-30)
Length = 474
Score = 31.1 bits (67), Expect = 0.90
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 12/97 (12%)
Query: 11 ASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTCR 70
A V+C D +PPP +W + + P I L T +SD G CR
Sbjct: 156 AVVRCKADGWPPPY-LRWYKEG----MPLSPHS----KIEEVSLHITFARQSDQGMYYCR 206
Query: 71 ATNMAGQQMDPCRYTL---LPAVKPDQPFNCTTLNLT 104
A N G ++ P + P VK + T L T
Sbjct: 207 ANNTVGSEIRPILIKMKQVTPRVKAKDHYVATRLGST 243
>SB_8703| Best HMM Match : rve (HMM E-Value=1.5e-22)
Length = 382
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 24 KNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTES 62
+ F TL+N +GT++++ K D + R V Y AT S
Sbjct: 120 ERFNRTLHNMLGTLEVDKKKDWPDYVARLVHAYNATKHS 158
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
Query: 9 EPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLT 68
E A ++ V P P +W + + + + T++N G + L T T D G+
Sbjct: 2272 EQAELEFVVSGTPTP-TLEW-YRDGLRVKESRRVRSTLEN-GIARLVITETWAEDMGTYK 2328
Query: 69 CRATNMAGQQMDPCRYTLLPAVKPDQPFNCTTLNLTD-DSAELRC-VAGY 116
C+ N G+ ++ A +P+ T + +T+ D A+ V GY
Sbjct: 2329 CQVRNDLGRTSTSAHLNIIVATRPEFKEKLTKVEVTEGDRAKFEVRVKGY 2378
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Query: 3 VGAAINEPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTES 62
V A + A + C + P P +W L N + D +K + + G LT T
Sbjct: 600 VEATEGDDAVLSCTISGKPVP-TIEW-LKNGIRVKDSRRTKCDLVD-GEVKLTIKTTRAD 656
Query: 63 DYGSLTCRATNMAGQQMDPCRYTLLPAVKPD 93
D G TC N G + ++ +P+
Sbjct: 657 DQGDYTCIVRNELGSAESKTKLKVIAFARPE 687
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 12 SVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTCRA 71
+++C V P P N +W + T T D SV T+T D G C A
Sbjct: 1686 TLECTVSGKPAP-NIEWYKDGLRFTATRRVMT-TFDGSVASV-TFTDAQGFDDGEYKCVA 1742
Query: 72 TNMAGQQMDPCRYTLLPAVKPD 93
TN G R T+ KP+
Sbjct: 1743 TNPLGSAQSSARLTVTVPSKPE 1764
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/85 (27%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Query: 8 NEPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSL 67
+E A + C + P P N +W +S+ + K V N G + LT T D G
Sbjct: 23 DENAILSCTISGTPTP-NAEW-YRDSIRVRESRRIKSEVVN-GMATLTIKQTRAEDQGEY 79
Query: 68 TCRATNMAGQQMDPCRYTLLPAVKP 92
C N G + VKP
Sbjct: 80 KCVLRNEHGTATSKAPLNVRVPVKP 104
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 4/92 (4%)
Query: 3 VGAAINEPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTES 62
V A A +C V P P+ W + + F + + LT+ T
Sbjct: 3149 VEAVQGSTARFECKVSGHPEPQ-IAWLKDGKELAIPRYIKPFYDGEVCK--LTFYETQPE 3205
Query: 63 DYGSLTCRATNMAGQQMDPCRYTL-LPAVKPD 93
D G TC A+N AG+ L P V P+
Sbjct: 3206 DEGDYTCVASNEAGEASSHASLVLSKPLVMPE 3237
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Query: 17 VDAFPPPKNFQWTLNNSMGTVDIEPS-KFTVDNIG-RSVLTYTATTESDYGSLTCRATNM 74
VD +P P+ W N+ + I P KF + G L + G LTC+A N
Sbjct: 2516 VDGYPKPE-IDWYKNDIL----IRPGPKFDIKEHGDHHTLIVKDCRPEETGKLTCKARNS 2570
Query: 75 AGQQMDPC 82
AGQ + C
Sbjct: 2571 AGQAICSC 2578
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 53 VLTYTATTESDYGSLTCRATNMAGQQMDPCRYTLLPAVKPDQPF 96
VLT T D GS C ATN AGQ D L A + + PF
Sbjct: 2453 VLTIRGVTPDDEGSYKCIATNPAGQ--DDTVAELTVAKRGNPPF 2494
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 51 RSVLTYTATTESDYGSLTCRATNMAGQQMDPCRYTLL---PAVKPDQPFNCTTLNLTD 105
RSVLT +D G TC AT+ AG+ D C LL V P+ + + LT+
Sbjct: 3114 RSVLTIIDAKLNDEGEYTCVATSKAGK--DSCSVELLVDEAVVPPEFVRKISNIELTE 3169
>SB_54662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/106 (25%), Positives = 40/106 (37%), Gaps = 11/106 (10%)
Query: 12 SVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTCRA 71
++ CD+ FPPP + +WT I + GR ++ T + D G C
Sbjct: 116 TLTCDIFGFPPP-HIEWT----RALQQIHSGR--TRQAGRRLII-KKTEQQDRGPYMCTG 167
Query: 72 TNMAGQQMDPCRYTLLPAVKP---DQPFNCTTLNLTDDSAELRCVA 114
TN G T+ P V P P T+ + +L C A
Sbjct: 168 TNKLGSVFALIVLTVYPVVPPTITKSPPPVVTVQRRGATLQLTCAA 213
>SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23)
Length = 932
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 7 INEPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEP-SKFTVDNIGRSVLTYTATTESDYG 65
+ + A + C D +P P+ W + MG + + TV R+ L + +D+G
Sbjct: 809 VGKAAKLTCQADGYPLPQ-ITWNPSPPMGNTSYDVIGRTTV----RATLIFVPRNATDFG 863
Query: 66 SLTCRATNMAG 76
C A N G
Sbjct: 864 KYKCSARNENG 874
>SB_41626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 753
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 7 INEPASVKCDVDAFPPPKNFQWTLNNSMG-TVDIEPSK-FTVDNIGRSVLTYTATTESDY 64
I E ++C P P+ W G V ++P F+V+ G V+ E+DY
Sbjct: 226 IGESLELRCFATGNPTPEVI-WLHELENGEVVPVDPGHVFSVE--GSLVVIKPRIEENDY 282
Query: 65 GSLTCRATNMAG 76
G TC A+N G
Sbjct: 283 GPYTCHASNRHG 294
>SB_26711| Best HMM Match : I-set (HMM E-Value=0)
Length = 327
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Query: 8 NEPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSL 67
N+ A KC V A P P +W + T +D + + LT ++D GS
Sbjct: 239 NDTAIFKCRVTASPAP-TVEWLRDGVRVTEGRRIVAQYLDEV--ATLTINQARDTDMGSY 295
Query: 68 TCRATNMAGQQMDPCRYTLLPAVKPD 93
C A N G + ++ KPD
Sbjct: 296 KCVARNNFGDISTSAKLRVVVNSKPD 321
>SB_50854| Best HMM Match : ig (HMM E-Value=6.1e-27)
Length = 770
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 15 CDVDAFPPPKNFQWTLNNSM---GTVDIEPSKFTVDNIGRSVLTYT--ATTESDYGSLTC 69
C+V +P P N W NN G D+ + ++ + LT A T + G C
Sbjct: 244 CEVTGYPAP-NITWLYNNMTVRPGRHDMWHGAYYLNALDHRRLTLNLFAVTRDNQGIYMC 302
Query: 70 RATNMAGQQ 78
RA+N G++
Sbjct: 303 RASNGWGKE 311
>SB_47305| Best HMM Match : I-set (HMM E-Value=0)
Length = 5832
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 11 ASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTE-SDYGSLTC 69
A+ +DAFP P+ +W L + T D K D S + + + D G++ C
Sbjct: 1134 ANFAVKIDAFPKPE-IEWYLGATKIT-DGGRFKIKTDKENCSYILFIDDVKLDDAGTVKC 1191
Query: 70 RATNMAGQ 77
ATN AG+
Sbjct: 1192 SATNAAGK 1199
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 17 VDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTCRATNMAG 76
++ +P P + N +G+ K D+ G+ L T+ D G+ C ATN AG
Sbjct: 14 IEGYPKPTVEWYQGKNKIGSSG--KHKILEDDDGKCSLIIKDLTKDDAGAYKCVATNDAG 71
Query: 77 Q 77
Q
Sbjct: 72 Q 72
>SB_50799| Best HMM Match : I-set (HMM E-Value=0)
Length = 1195
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 10/112 (8%)
Query: 7 INEPASVKCDVDAFPPPKNFQWTLNN-SMGTVDIEPSKFTVDNIGRSVLTYTATTESDYG 65
+N C P P+ W+ + ++ DI+ +K ++ N+ + A+ E +Y
Sbjct: 656 VNRTVVFTCSASGIPTPQ-LTWSFSGGNLPNYDIDGNKLSIVNVQNN-----ASYEGNY- 708
Query: 66 SLTCRATNMAGQQMDPCRYTLLPAVKPDQPFNCTTLNLTDDSAELRCVAGYD 117
TC A + AG+ T+ K + N T + + +L C A D
Sbjct: 709 --TCTADSRAGRTSFTAMLTVHALPKITKLLNKTLVAERGSNVQLSCQASGD 758
>SB_42485| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1565
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 55 TYTATTESDYGSLTCRATNMAGQQMDPCRYTLL--PAVKPD---QPFNCTTLNLTDDSAE 109
T + + D+G CRATN+ GQ++ + L+ A PD +P + L++ +S
Sbjct: 111 TIVSFSMKDFGLYQCRATNVKGQEIQSREFFLIGYVAAIPDVKIKPRHAVALSI-GESTN 169
Query: 110 LRCVAGYDGGL 120
C + + L
Sbjct: 170 YTCTSAQNANL 180
>SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/44 (36%), Positives = 21/44 (47%)
Query: 29 TLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTCRAT 72
+L NS+ + K TV++ G V T T D TCRAT
Sbjct: 112 SLKNSLHKKKLALQKETVESEGEDVATSTVDKSEDSTCKTCRAT 155
>SB_33752| Best HMM Match : I-set (HMM E-Value=3.7e-15)
Length = 783
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 7 INEPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGS 66
+ E +V DV+ +W N++ V+ +FT G+ L + D G
Sbjct: 341 VKEGENVTLDVEVKAEHYELEW-YKNAVDVVEGGRVRFTSGEGGKHALVIEEVEDDDQGE 399
Query: 67 LTCRATNMAGQ 77
C A N AG+
Sbjct: 400 YCCVAMNDAGR 410
>SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2409
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 5 AAINEPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPS---KFTVDNIGRSVL-TYTATT 60
A+ N+P ++C P PK + W + + D E S +F + N + L
Sbjct: 803 ASRNQPTDLRCRATGSPKPKIY-WLKDGRIVPTDGEDSENRRFIMPNGDLTFLRVINKKR 861
Query: 61 ESDYGSLTCRATNMAGQ 77
+SD G C A N AG+
Sbjct: 862 KSDSGVYQCVAENSAGK 878
>SB_51604| Best HMM Match : I-set (HMM E-Value=2.3e-21)
Length = 152
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 13 VKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTCRAT 72
+ C+ P P+ W N G + ++ V G ++L A SD GS TC A
Sbjct: 82 IVCNATGLPAPR-VTWRQN---GNAISQGGRYRVTADGVTMLIDGAVV-SDTGSFTCEAE 136
Query: 73 NMAGQ 77
N AG+
Sbjct: 137 NFAGK 141
>SB_10606| Best HMM Match : I-set (HMM E-Value=0)
Length = 872
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 13 VKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTESDYGSLTCRAT 72
+ C+ P P+ W N G + ++ V G ++L A SD GS TC A
Sbjct: 471 IVCNATGLPAPR-VTWRQN---GNAISQGGRYRVTADGVTMLIDGAVV-SDTGSFTCEAE 525
Query: 73 NMAGQ 77
N AG+
Sbjct: 526 NFAGK 530
Score = 28.3 bits (60), Expect = 6.3
Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 6/117 (5%)
Query: 1 MVVGAAINEPASVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATT 60
M + + ++KC V P P W+ G I + +V G V+ + +
Sbjct: 238 MTIRTLTSTSITLKCPVTGSPKPL-VDWS---KTGQPIISGDRVSVTVTGSLVIVNSRS- 292
Query: 61 ESDYGSLTCRATNMAGQQMDPCRYTLLPAVKPDQPFNCTTLNLTDDSAELRCVAGYD 117
SD G C A N+ G+ +L V+P + +N + + AG D
Sbjct: 293 -SDSGEYVCTARNLLGEDSAVSTVNILNPVRPGIFASYGHINALPGFSPVNVTAGQD 348
>SB_5223| Best HMM Match : fn3 (HMM E-Value=3.2e-27)
Length = 197
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 85 TLLPAVKPDQPFNCTTLNLTDDSAELRCVAGYDGGLHTTYIVEVWETGNLIANVSSSVPV 144
T+ PA +P N T + + + + G+ GG H TY + ++ + S++ V
Sbjct: 103 TIAPANITTEPVNSTAVIIQWHDVPTQHLNGFFGGFHVTYRRLTHASCDVSVHTSATQVV 162
Query: 145 WKLGDLGSGKALKLYFYAHNARG 167
LG + G K+ A RG
Sbjct: 163 --LGPIEPGVEYKVQISASTGRG 183
>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4232
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 12 SVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGR-----SVLTYTATTESDYGS 66
++ C ++ P + W +N+ +D P + TV + G S LT T +D
Sbjct: 1636 TLTCQLEC-KPKCSVTWLKDNT--PLDTSPDRITVTHPGSYGNTTSSLTITNLVRTDEAR 1692
Query: 67 LTCRATNMAGQQ 78
+C+A N AG++
Sbjct: 1693 YSCKAINAAGEK 1704
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 12 SVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGR-----SVLTYTATTESDYGS 66
++ C ++ P + W +N+ +D P + TV + G S LT T +D
Sbjct: 2078 TLTCQLEC-KPKCSVTWLKDNT--PLDTSPDRITVTHPGSYGNTTSSLTITNLVRTDEAR 2134
Query: 67 LTCRATNMAGQQ 78
+C+A N AG++
Sbjct: 2135 YSCKAINAAGEK 2146
>SB_30548| Best HMM Match : I-set (HMM E-Value=2.1e-11)
Length = 203
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 9/67 (13%)
Query: 12 SVKCDVDAFPPPKNFQWTLNNSMGTVDIEPS-KFTVDNIGRSVLTYTATTESDYGSLTCR 70
++ C P P + W +NN+ ++ P +F V LT + D G++ C
Sbjct: 18 TIICPTRGLPAP-DVTWEMNNT----NVRPGGRFVVQE---GTLTIRNLVKQDQGNIRCV 69
Query: 71 ATNMAGQ 77
A N AGQ
Sbjct: 70 ARNAAGQ 76
>SB_6364| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 49 IGRSVLTYTATTESDYGSLTCRATNMAG 76
I +S+L SD G+ TCRA NM G
Sbjct: 71 ITQSILVIMEARGSDTGTYTCRARNMMG 98
>SB_30292| Best HMM Match : fn3 (HMM E-Value=1.2e-12)
Length = 519
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 40 EPSKFTVDNIGRSVLTYTATTES-DYGSLTCRATNMAG 76
+P V I L T T +S DYG CRA+N+ G
Sbjct: 9 QPITAGVSPISGGQLQVTTTQDSGDYGQYKCRASNLLG 46
>SB_11883| Best HMM Match : I-set (HMM E-Value=0)
Length = 616
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 48 NIGRSVLTYTATTESDYGSLTCRATNMAGQQMDPCRYTLLPAVKPDQPFNCTTLNLTD 105
N+ +VLT + SD G C A N+ G T+L P T+ N+T+
Sbjct: 466 NVSHAVLTLPTLSPSDSGLYRCEARNLKGVDDADSYLTVLVGSPPS--IRTTSENITE 521
>SB_5198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1037
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 134 LIANVSSSVPVWKLGDLGSGKALKLYFYAHNARGRSD 170
LIAN S +W GD GKA K++ +AH + D
Sbjct: 254 LIANGSDIKCIWSFGD---GKADKMFDHAHGGSFKQD 287
>SB_37776| Best HMM Match : fn3 (HMM E-Value=1.4e-22)
Length = 1296
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Query: 51 RSVLTYTATTESDYGSLTCRATNMAGQQMDPCRYTLLPAVKPDQPFNCTTLNLTDDSAEL 110
+ +LT D+G C A G+ + ++ P +P T +++ +A +
Sbjct: 179 KGLLTILGVQTVDHGEYECVAETDKGKAVHTTTLNVISV--PSRP-TITAVSIEYTTARI 235
Query: 111 RCVAGYDGGLHTTYIVEVW 129
AGYDGG + VW
Sbjct: 236 VWTAGYDGGFAQRF--RVW 252
>SB_28651| Best HMM Match : ig (HMM E-Value=1.4e-09)
Length = 221
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Query: 12 SVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTES-DYGSLTCR 70
S++C P P+ + T + P G S L T T E+ DYG CR
Sbjct: 104 SLQCKARGVPSPQITWYKPGGQPITAGVSPIS------GGSQLQVTTTREAGDYGQYKCR 157
Query: 71 ATNMAG 76
A N+ G
Sbjct: 158 AFNLLG 163
>SB_26428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query: 12 SVKCDVDAFPPPKNFQWTLNNSMGTVDIEPSKFTVDNIGRSVLTYTATTES-DYGSLTCR 70
S++C P P+ + T + P G S L T T ++ DYG CR
Sbjct: 17 SLQCKARGVPSPQITWYKPGGQPITAGVSPIS------GGSQLQVTTTQDAGDYGQYKCR 70
Query: 71 ATNMAG 76
A+N+ G
Sbjct: 71 ASNLLG 76
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.131 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,457,052
Number of Sequences: 59808
Number of extensions: 314031
Number of successful extensions: 784
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 707
Number of HSP's gapped (non-prelim): 117
length of query: 249
length of database: 16,821,457
effective HSP length: 80
effective length of query: 169
effective length of database: 12,036,817
effective search space: 2034222073
effective search space used: 2034222073
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -