GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001111-TA|BGIBMGA001111-PA|IPR013151|Immunoglobulin,
IPR003961|Fibronectin, type III, IPR008957|Fibronectin, type III-like
fold, IPR007110|Immunoglobulin-like
         (249 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   2.1  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   2.1  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   2.1  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    24   4.8  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   8.4  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    23   8.4  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 65  GSLTCRATNMAGQQMDPCRYTLLPAVKPDQPFNCT 99
           G+  CR  N A    D C    L   + +QP+  T
Sbjct: 158 GATVCRGANGATAASDACLECFLAVEEHEQPYELT 192


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 65  GSLTCRATNMAGQQMDPCRYTLLPAVKPDQPFNCT 99
           G+  CR  N A    D C    L   + +QP+  T
Sbjct: 158 GATVCRGANGATAASDACLECFLAVEEHEQPYELT 192


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 72  TNMAGQQMDPCRYTLLPAVKPDQPFNCTTLNLTDDSAELRCV 113
           +N+     D C+Y +LP  + D   N  T+N   D+     +
Sbjct: 45  SNLRYDAPDDCKYRILPGNEVDLACNLRTVNSEFDNTNFSVI 86


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 144 VWKLGDLGSGKALKLYFYAHNARGRSDITKLRVHTLSRLA 183
           ++ LG  G  K L ++           +  LR+H L+R+A
Sbjct: 214 IYTLGFTGGTKLLTIFSNVKYCSAMLKLVALRIHCLARVA 253


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 98  CTTLNLTDDSAELRCVAGYDGGLHTTY 124
           C+T N   DSA     AG  G  H T+
Sbjct: 37  CSTCNAPTDSANSVSCAGVCGSKHHTH 63


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 12  SVKCDVDAFPPPKNFQWTLNNSMGTVDIEP 41
           S+ C++  F    N  W   N++  V+I+P
Sbjct: 294 SIVCNIGHFDCEINVTWLQENAVEKVNIKP 323


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.131    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,550
Number of Sequences: 2123
Number of extensions: 9695
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 7
length of query: 249
length of database: 516,269
effective HSP length: 62
effective length of query: 187
effective length of database: 384,643
effective search space: 71928241
effective search space used: 71928241
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)