Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001109-TA|BGIBMGA001109-PA|undefined
         (66 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   1.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   1.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   1.4  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    20   1.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    20   2.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    20   2.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    19   3.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    19   5.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    19   5.6  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    18   7.4  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 1.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)

Query: 4   CGLEHHMLKVIHL 16
           C L HH+ K++ L
Sbjct: 506 CALHHHLSKLVKL 518


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 1.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query: 4   CGLEHHMLKVIHL 16
           C L HH+ K+I L
Sbjct: 855 CTLHHHLSKLIRL 867



 Score = 19.8 bits (39), Expect = 2.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)

Query: 4    CGLEHHMLKVI 14
            C L HH+ K+I
Sbjct: 1305 CSLHHHLSKLI 1315



 Score = 18.6 bits (36), Expect = 5.6
 Identities = 5/11 (45%), Positives = 8/11 (72%)

Query: 4   CGLEHHMLKVI 14
           C L HH+ K++
Sbjct: 579 CTLHHHLSKLV 589


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 1.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)

Query: 4   CGLEHHMLKVIHL 16
           C L HH+ K++ L
Sbjct: 231 CALHHHLSKLVKL 243


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 20.2 bits (40), Expect = 1.8
 Identities = 9/37 (24%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 25  TNFRLIQNKTDDDTVNVICAAEGAFPAPNLTLATPER 61
           T  +L+  +  +  + ++   +GA P P L +  P+R
Sbjct: 170 TGVQLVPTRLANGDIALVLPTQGASPLP-LLVPIPQR 205


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 19.8 bits (39), Expect = 2.4
 Identities = 4/13 (30%), Positives = 9/13 (69%)

Query: 2   YNCGLEHHMLKVI 14
           Y CG+++H+   +
Sbjct: 152 YKCGIQYHICNTV 164


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 19.8 bits (39), Expect = 2.4
 Identities = 4/13 (30%), Positives = 9/13 (69%)

Query: 2   YNCGLEHHMLKVI 14
           Y CG+++H+   +
Sbjct: 148 YKCGIQYHICNTV 160


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 19.4 bits (38), Expect = 3.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query: 43  CAAEGAFPAPNLT 55
           C   G F APNLT
Sbjct: 109 CHTFGRFLAPNLT 121


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 18.6 bits (36), Expect = 5.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 39  VNVICAAEGAFPAPNLTLATPERYNLN 65
           V+++    GAF A NL +      N+N
Sbjct: 198 VSLVRELRGAFKAENLLVTLTVLPNVN 224


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 18.6 bits (36), Expect = 5.6
 Identities = 5/11 (45%), Positives = 8/11 (72%)

Query: 4   CGLEHHMLKVI 14
           C L HH+ K++
Sbjct: 223 CTLHHHLSKLV 233


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 18.2 bits (35), Expect = 7.4
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 31  QNKTDDD 37
           +NKTDDD
Sbjct: 153 KNKTDDD 159


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.138    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,899
Number of Sequences: 317
Number of extensions: 606
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of query: 66
length of database: 114,650
effective HSP length: 44
effective length of query: 22
effective length of database: 100,702
effective search space:  2215444
effective search space used:  2215444
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.6 bits)
S2: 34 (17.8 bits)