BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001109-TA|BGIBMGA001109-PA|undefined (66 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g67160.1 68418.m08466 transferase family protein similar to a... 27 1.2 At3g13980.1 68416.m01765 expressed protein 26 3.6 At3g04450.1 68416.m00472 myb family transcription factor contain... 25 4.7 At5g38220.2 68418.m04607 expressed protein 25 6.2 At1g58300.1 68414.m06632 heme oxygenase, putative similar to hem... 25 6.2 >At5g67160.1 68418.m08466 transferase family protein similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase, Dianthus caryophyllus [gi:2239091]; contains Pfam transferase family domain PF002458 Length = 434 Score = 27.5 bits (58), Expect = 1.2 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%) Query: 5 GLEHHMLKVIHLRYLITVPETNF-----RLIQNKTDDDTVNVICAAEGA 48 GL H ++V L+ ++V F RL++ K DDDTV+ + +G+ Sbjct: 45 GLLFHKIEVKQLQASLSVALDRFYPLAGRLVKLKNDDDTVSFFISCDGS 93 >At3g13980.1 68416.m01765 expressed protein Length = 357 Score = 25.8 bits (54), Expect = 3.6 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Query: 10 MLKVIHLRYLITVPETNFRLIQNKTDDDTVNVICAAEGAFPAPNLTLATPERY 62 +L+ H + +T TN ++ +DD + CA+ F NL+ ERY Sbjct: 284 LLRTYHNKNKVTT--TNINNVEEDDEDDAAS--CASSDLFELENLSAIGIERY 332 >At3g04450.1 68416.m00472 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain Length = 438 Score = 25.4 bits (53), Expect = 4.7 Identities = 12/39 (30%), Positives = 23/39 (58%) Query: 17 RYLITVPETNFRLIQNKTDDDTVNVICAAEGAFPAPNLT 55 RYL + E ++ +NK D + + + A+ + P+PNL+ Sbjct: 357 RYLQMMIEKQQKMQENKKDSTSSSSMPEADPSAPSPNLS 395 >At5g38220.2 68418.m04607 expressed protein Length = 238 Score = 25.0 bits (52), Expect = 6.2 Identities = 10/22 (45%), Positives = 15/22 (68%) Query: 13 VIHLRYLITVPETNFRLIQNKT 34 VIH+++LI + E NF Q K+ Sbjct: 204 VIHMKWLIVLMENNFGNFQKKS 225 >At1g58300.1 68414.m06632 heme oxygenase, putative similar to heme oxygenase 4 GI:14485565 from [Arabidopsis thaliana] Length = 283 Score = 25.0 bits (52), Expect = 6.2 Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%) Query: 12 KVIHLRYLITVPETNFRLIQNKTDDDT--VNVICAA 45 K + +RY+ T+ L++ +D T VNV+ AA Sbjct: 29 KTVTIRYVRTIAAPRRHLVRRANEDQTLVVNVVAAA 64 Database: arabidopsis Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.322 0.138 0.426 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,751,491 Number of Sequences: 28952 Number of extensions: 56846 Number of successful extensions: 81 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 78 Number of HSP's gapped (non-prelim): 5 length of query: 66 length of database: 12,070,560 effective HSP length: 46 effective length of query: 20 effective length of database: 10,738,768 effective search space: 214775360 effective search space used: 214775360 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 51 (24.6 bits)
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