GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001109-TA|BGIBMGA001109-PA|undefined
         (66 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071285-1|AAL48907.1|  263|Drosophila melanogaster RE31221p pro...    27   2.4  
AE013599-3491|AAF46918.2|  263|Drosophila melanogaster CG13532-P...    27   2.4  

>AY071285-1|AAL48907.1|  263|Drosophila melanogaster RE31221p
           protein.
          Length = 263

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 17  RYLITVPETNFRLIQNKTDDDT-VNVICAAEGAFPAPNLTL 56
           R  I VPE++F L    +     V+++CA +  FP P L++
Sbjct: 136 RLQIIVPESDFMLEARMSGSRMDVDIMCAVQHVFPQPMLSV 176


>AE013599-3491|AAF46918.2|  263|Drosophila melanogaster CG13532-PA
           protein.
          Length = 263

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 17  RYLITVPETNFRLIQNKTDDDT-VNVICAAEGAFPAPNLTL 56
           R  I VPE++F L    +     V+++CA +  FP P L++
Sbjct: 136 RLQIIVPESDFMLEARMSGSRMDVDIMCAVQHVFPQPMLSV 176


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.138    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,792,376
Number of Sequences: 52641
Number of extensions: 126529
Number of successful extensions: 192
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 192
Number of HSP's gapped (non-prelim): 2
length of query: 66
length of database: 24,830,863
effective HSP length: 46
effective length of query: 20
effective length of database: 22,409,377
effective search space: 448187540
effective search space used: 448187540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 53 (25.4 bits)