Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001109-TA|BGIBMGA001109-PA|undefined
(66 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 27 2.1
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 27 2.1
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 27 2.1
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 27 2.1
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 27 2.1
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 27 2.1
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 27 2.1
Z22176-7|CAA80137.1| 910|Caenorhabditis elegans Hypothetical pr... 26 3.8
Z68342-3|CAA92773.1| 751|Caenorhabditis elegans Hypothetical pr... 25 5.0
Z81124-9|CAB03379.2| 328|Caenorhabditis elegans Hypothetical pr... 25 6.6
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 26.6 bits (56), Expect = 2.1
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 16 LRYLITVPETNFRLIQNKTD-DDTVNVICAAEGAFPAPNLT-LATPERYN-LNP 66
L+Y I + + LI N + DDT C A G LT L P +Y+ LNP
Sbjct: 644 LKYKIVIEKNVCTLIINNPEVDDTGKYTCEANGVPTHAQLTVLEPPMKYSFLNP 697
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 26.6 bits (56), Expect = 2.1
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 16 LRYLITVPETNFRLIQNKTD-DDTVNVICAAEGAFPAPNLT-LATPERYN-LNP 66
L+Y I + + LI N + DDT C A G LT L P +Y+ LNP
Sbjct: 1173 LKYKIVIEKNVCTLIINNPEVDDTGKYTCEANGVPTHAQLTVLEPPMKYSFLNP 1226
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 26.6 bits (56), Expect = 2.1
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 16 LRYLITVPETNFRLIQNKTD-DDTVNVICAAEGAFPAPNLT-LATPERYN-LNP 66
L+Y I + + LI N + DDT C A G LT L P +Y+ LNP
Sbjct: 854 LKYKIVIEKNVCTLIINNPEVDDTGKYTCEANGVPTHAQLTVLEPPMKYSFLNP 907
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 26.6 bits (56), Expect = 2.1
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 16 LRYLITVPETNFRLIQNKTD-DDTVNVICAAEGAFPAPNLT-LATPERYN-LNP 66
L+Y I + + LI N + DDT C A G LT L P +Y+ LNP
Sbjct: 644 LKYKIVIEKNVCTLIINNPEVDDTGKYTCEANGVPTHAQLTVLEPPMKYSFLNP 697
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 26.6 bits (56), Expect = 2.1
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 16 LRYLITVPETNFRLIQNKTD-DDTVNVICAAEGAFPAPNLT-LATPERYN-LNP 66
L+Y I + + LI N + DDT C A G LT L P +Y+ LNP
Sbjct: 1173 LKYKIVIEKNVCTLIINNPEVDDTGKYTCEANGVPTHAQLTVLEPPMKYSFLNP 1226
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 26.6 bits (56), Expect = 2.1
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 16 LRYLITVPETNFRLIQNKTD-DDTVNVICAAEGAFPAPNLT-LATPERYN-LNP 66
L+Y I + + LI N + DDT C A G LT L P +Y+ LNP
Sbjct: 854 LKYKIVIEKNVCTLIINNPEVDDTGKYTCEANGVPTHAQLTVLEPPMKYSFLNP 907
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 26.6 bits (56), Expect = 2.1
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 16 LRYLITVPETNFRLIQNKTD-DDTVNVICAAEGAFPAPNLT-LATPERYN-LNP 66
L+Y I + + LI N + DDT C A G LT L P +Y+ LNP
Sbjct: 63 LKYKIVIEKNVCTLIINNPEVDDTGKYTCEANGVPTHAQLTVLEPPMKYSFLNP 116
>Z22176-7|CAA80137.1| 910|Caenorhabditis elegans Hypothetical
protein ZK1098.8 protein.
Length = 910
Score = 25.8 bits (54), Expect = 3.8
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 15 HLRYLITVPETNFRLIQNKTDDDTVNV 41
HLR++ITVP ++ ++ D+ T+ +
Sbjct: 710 HLRHIITVPSKSYEALKMDYDNYTIAI 736
>Z68342-3|CAA92773.1| 751|Caenorhabditis elegans Hypothetical
protein F38E11.4 protein.
Length = 751
Score = 25.4 bits (53), Expect = 5.0
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 19 LITVPETNFRLIQNKTD-DDTVNVICAAEGA 48
++T PET LIQN D ++T + A+GA
Sbjct: 397 MLTTPETPPELIQNSVDEEETTSERSIAQGA 427
>Z81124-9|CAB03379.2| 328|Caenorhabditis elegans Hypothetical
protein T21B4.12 protein.
Length = 328
Score = 25.0 bits (52), Expect = 6.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 41 VICAAEGAFPAPNLTLATPERYNLN 65
++C AFP P+L L P + LN
Sbjct: 67 IVCIGYLAFPVPSLLLEDPPNHWLN 91
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.138 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,911,509
Number of Sequences: 27539
Number of extensions: 64631
Number of successful extensions: 133
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 131
Number of HSP's gapped (non-prelim): 10
length of query: 66
length of database: 12,573,161
effective HSP length: 46
effective length of query: 20
effective length of database: 11,306,367
effective search space: 226127340
effective search space used: 226127340
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 51 (24.6 bits)
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