SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001108-TA|BGIBMGA001108-PA|IPR013151|Immunoglobulin,
IPR007110|Immunoglobulin-like
         (149 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC024164-1|AAH24164.1|  493|Homo sapiens CEACAM1 protein protein.      31   2.1  
X16356-1|CAA34405.1|  373|Homo sapiens TM3-CEA protein protein.        30   2.8  
X16354-1|CAA34404.1|  526|Homo sapiens TM1-CEA preprotein protein.     30   2.8  
S71326-1|AAB31183.1|  464|Homo sapiens BGPc protein.                   30   2.8  
M76741-1|AAA57141.1|  226|Homo sapiens biliary glycoprotein prot...    30   2.8  
M72238-1|AAA58394.1|  417|Homo sapiens biliary glycoprotein a pr...    30   2.8  
J03858-1|AAA51826.1|  526|Homo sapiens BGP protein.                    30   2.8  
D90311-1|BAA14341.1|  417|Homo sapiens biliary glycoprotein prot...    30   2.8  
DQ989182-1|ABI75349.1|  526|Homo sapiens carcinoembryonic antige...    30   2.8  
BC014473-1|AAH14473.1|  468|Homo sapiens CEACAM1 protein protein.      30   2.8  
AC004785-5|AAC18437.1|  417|Homo sapiens BGPg_HUMAN protein.           30   2.8  
AC004785-4|AAC18436.1|  464|Homo sapiens BGPc_HUMAN protein.           30   2.8  
AC004785-3|AAC18434.1|  526|Homo sapiens BGP1_HUMAN protein.           30   2.8  
D50926-1|BAA09485.1|  950|Homo sapiens KIAA0136 protein.               30   3.7  
BC132731-1|AAI32732.1|  938|Homo sapiens MORC family CW-type zin...    30   3.7  
BC094779-1|AAH94779.1|  939|Homo sapiens MORC family CW-type zin...    30   3.7  
AP000693-1|BAA89432.1|  950|Homo sapiens KIAA0136 protein.             30   3.7  
BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA seq...    29   8.5  
AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA seq...    29   8.5  
AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA seq...    29   8.5  
AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA seq...    29   8.5  
AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA seq...    29   8.5  
AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA seq...    29   8.5  
AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA seq...    29   8.5  
AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA seq...    29   8.5  
AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein.            29   8.5  
AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein.           29   8.5  

>BC024164-1|AAH24164.1|  493|Homo sapiens CEACAM1 protein protein.
          Length = 493

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 53  DYTYGNNTSGLMVKWFFKNNARP 75
           D T   N +G+ ++WFFKN + P
Sbjct: 374 DLTCSTNDTGISIRWFFKNQSLP 396


>X16356-1|CAA34405.1|  373|Homo sapiens TM3-CEA protein protein.
          Length = 373

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)

Query: 43  GVQDAVILDCDYTYGNNTSGLMVKWFFKNNARP 75
           G +D+V L C      N +G+ ++WFFKN + P
Sbjct: 248 GDKDSVNLTCS----TNDTGISIRWFFKNQSLP 276


>X16354-1|CAA34404.1|  526|Homo sapiens TM1-CEA preprotein protein.
          Length = 526

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)

Query: 43  GVQDAVILDCDYTYGNNTSGLMVKWFFKNNARP 75
           G +D+V L C      N +G+ ++WFFKN + P
Sbjct: 339 GDKDSVNLTCS----TNDTGISIRWFFKNQSLP 367


>S71326-1|AAB31183.1|  464|Homo sapiens BGPc protein.
          Length = 464

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)

Query: 43  GVQDAVILDCDYTYGNNTSGLMVKWFFKNNARP 75
           G +D+V L C      N +G+ ++WFFKN + P
Sbjct: 339 GDKDSVNLTCS----TNDTGISIRWFFKNQSLP 367


>M76741-1|AAA57141.1|  226|Homo sapiens biliary glycoprotein
          protein.
          Length = 226

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)

Query: 43 GVQDAVILDCDYTYGNNTSGLMVKWFFKNNARP 75
          G +D+V L C      N +G+ ++WFFKN + P
Sbjct: 47 GDKDSVNLTCS----TNDTGISIRWFFKNQSLP 75


>M72238-1|AAA58394.1|  417|Homo sapiens biliary glycoprotein a
           protein.
          Length = 417

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)

Query: 43  GVQDAVILDCDYTYGNNTSGLMVKWFFKNNARP 75
           G +D+V L C      N +G+ ++WFFKN + P
Sbjct: 339 GDKDSVNLTCS----TNDTGISIRWFFKNQSLP 367


>J03858-1|AAA51826.1|  526|Homo sapiens BGP protein.
          Length = 526

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)

Query: 43  GVQDAVILDCDYTYGNNTSGLMVKWFFKNNARP 75
           G +D+V L C      N +G+ ++WFFKN + P
Sbjct: 339 GDKDSVNLTCS----TNDTGISIRWFFKNQSLP 367


>D90311-1|BAA14341.1|  417|Homo sapiens biliary glycoprotein
           protein.
          Length = 417

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)

Query: 43  GVQDAVILDCDYTYGNNTSGLMVKWFFKNNARP 75
           G +D+V L C      N +G+ ++WFFKN + P
Sbjct: 339 GDKDSVNLTCS----TNDTGISIRWFFKNQSLP 367


>DQ989182-1|ABI75349.1|  526|Homo sapiens carcinoembryonic
           antigen-related cell adhesion molecule 1 (biliary
           glycoprotein protein.
          Length = 526

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)

Query: 43  GVQDAVILDCDYTYGNNTSGLMVKWFFKNNARP 75
           G +D+V L C      N +G+ ++WFFKN + P
Sbjct: 339 GDKDSVNLTCS----TNDTGISIRWFFKNQSLP 367


>BC014473-1|AAH14473.1|  468|Homo sapiens CEACAM1 protein protein.
          Length = 468

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)

Query: 43  GVQDAVILDCDYTYGNNTSGLMVKWFFKNNARP 75
           G +D+V L C      N +G+ ++WFFKN + P
Sbjct: 339 GDKDSVNLTCS----TNDTGISIRWFFKNQSLP 367


>AC004785-5|AAC18437.1|  417|Homo sapiens BGPg_HUMAN protein.
          Length = 417

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)

Query: 43  GVQDAVILDCDYTYGNNTSGLMVKWFFKNNARP 75
           G +D+V L C      N +G+ ++WFFKN + P
Sbjct: 339 GDKDSVNLTCS----TNDTGISIRWFFKNQSLP 367


>AC004785-4|AAC18436.1|  464|Homo sapiens BGPc_HUMAN protein.
          Length = 464

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)

Query: 43  GVQDAVILDCDYTYGNNTSGLMVKWFFKNNARP 75
           G +D+V L C      N +G+ ++WFFKN + P
Sbjct: 339 GDKDSVNLTCS----TNDTGISIRWFFKNQSLP 367


>AC004785-3|AAC18434.1|  526|Homo sapiens BGP1_HUMAN protein.
          Length = 526

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%)

Query: 43  GVQDAVILDCDYTYGNNTSGLMVKWFFKNNARP 75
           G +D+V L C      N +G+ ++WFFKN + P
Sbjct: 339 GDKDSVNLTCS----TNDTGISIRWFFKNQSLP 367


>D50926-1|BAA09485.1|  950|Homo sapiens KIAA0136 protein.
          Length = 950

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 66  KWFFKNNARPVYQWI-VPQKPQDMGILRGRVDLTYRASN 103
           KW+  NN  P ++   VP++P+D  ++    + TY+ +N
Sbjct: 443 KWYCSNNPDPQFRNCEVPEEPEDEDLVHPTYEKTYKKTN 481


>BC132731-1|AAI32732.1|  938|Homo sapiens MORC family CW-type zinc
           finger 3 protein.
          Length = 938

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 66  KWFFKNNARPVYQWI-VPQKPQDMGILRGRVDLTYRASN 103
           KW+  NN  P ++   VP++P+D  ++    + TY+ +N
Sbjct: 432 KWYCSNNPDPQFRNCEVPEEPEDEDLVHPTYEKTYKKTN 470


>BC094779-1|AAH94779.1|  939|Homo sapiens MORC family CW-type zinc
           finger 3 protein.
          Length = 939

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 66  KWFFKNNARPVYQWI-VPQKPQDMGILRGRVDLTYRASN 103
           KW+  NN  P ++   VP++P+D  ++    + TY+ +N
Sbjct: 432 KWYCSNNPDPQFRNCEVPEEPEDEDLVHPTYEKTYKKTN 470


>AP000693-1|BAA89432.1|  950|Homo sapiens KIAA0136 protein.
          Length = 950

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 66  KWFFKNNARPVYQWI-VPQKPQDMGILRGRVDLTYRASN 103
           KW+  NN  P ++   VP++P+D  ++    + TY+ +N
Sbjct: 443 KWYCSNNPDPQFRNCEVPEEPEDEDLVHPTYEKTYKKTN 481


>BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA sequence
            from clone RP11-465I11 on chromosome 1. ).
          Length = 5635

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 111  ALRIVKPNTDISGDYTCVVSTFMEEDSRTKQMTV 144
            +L I+ P+ D +  Y C V+    +D RT  +TV
Sbjct: 3860 SLVIISPSVDDTATYECTVTNGAGDDKRTVDLTV 3893


>AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA sequence
            from clone GS1-268N14 on chromosome 1. ).
          Length = 5635

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 111  ALRIVKPNTDISGDYTCVVSTFMEEDSRTKQMTV 144
            +L I+ P+ D +  Y C V+    +D RT  +TV
Sbjct: 3860 SLVIISPSVDDTATYECTVTNGAGDDKRTVDLTV 3893


>AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA sequence
            from clone GS1-77J13 on chromosome 1. ).
          Length = 5635

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 111  ALRIVKPNTDISGDYTCVVSTFMEEDSRTKQMTV 144
            +L I+ P+ D +  Y C V+    +D RT  +TV
Sbjct: 3860 SLVIISPSVDDTATYECTVTNGAGDDKRTVDLTV 3893


>AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA sequence
            from clone GS1-164L12 on chromosome 1. ).
          Length = 5635

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 111  ALRIVKPNTDISGDYTCVVSTFMEEDSRTKQMTV 144
            +L I+ P+ D +  Y C V+    +D RT  +TV
Sbjct: 3860 SLVIISPSVDDTATYECTVTNGAGDDKRTVDLTV 3893


>AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA sequence
            from clone GS1-174L6 on chromosome 1. ).
          Length = 5635

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 111  ALRIVKPNTDISGDYTCVVSTFMEEDSRTKQMTV 144
            +L I+ P+ D +  Y C V+    +D RT  +TV
Sbjct: 3860 SLVIISPSVDDTATYECTVTNGAGDDKRTVDLTV 3893


>AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA sequence
            from clone GS1-153O3 on chromosome 1. ).
          Length = 5635

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 111  ALRIVKPNTDISGDYTCVVSTFMEEDSRTKQMTV 144
            +L I+ P+ D +  Y C V+    +D RT  +TV
Sbjct: 3860 SLVIISPSVDDTATYECTVTNGAGDDKRTVDLTV 3893


>AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA sequence
            from clone GS1-118G19 on chromosome 1q25.1-31.1. ).
          Length = 5635

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 111  ALRIVKPNTDISGDYTCVVSTFMEEDSRTKQMTV 144
            +L I+ P+ D +  Y C V+    +D RT  +TV
Sbjct: 3860 SLVIISPSVDDTATYECTVTNGAGDDKRTVDLTV 3893


>AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA sequence
            from clone GS1-248A21 on chromosome 1q31.1-31.3. ).
          Length = 5635

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 111  ALRIVKPNTDISGDYTCVVSTFMEEDSRTKQMTV 144
            +L I+ P+ D +  Y C V+    +D RT  +TV
Sbjct: 3860 SLVIISPSVDDTATYECTVTNGAGDDKRTVDLTV 3893


>AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein.
          Length = 2673

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 111 ALRIVKPNTDISGDYTCVVSTFMEEDSRTKQMTV 144
           +L I+ P+ D +  Y C V+    +D RT  +TV
Sbjct: 898 SLVIISPSVDDTATYECTVTNGAGDDKRTVDLTV 931


>AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein.
          Length = 5636

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 111  ALRIVKPNTDISGDYTCVVSTFMEEDSRTKQMTV 144
            +L I+ P+ D +  Y C V+    +D RT  +TV
Sbjct: 3861 SLVIISPSVDDTATYECTVTNGAGDDKRTVDLTV 3894


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.323    0.138    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,797,302
Number of Sequences: 224733
Number of extensions: 851190
Number of successful extensions: 1640
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1455
Number of HSP's gapped (non-prelim): 189
length of query: 149
length of database: 73,234,838
effective HSP length: 83
effective length of query: 66
effective length of database: 54,581,999
effective search space: 3602411934
effective search space used: 3602411934
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)

- SilkBase 1999-2023 -