GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001108-TA|BGIBMGA001108-PA|IPR013151|Immunoglobulin,
IPR007110|Immunoglobulin-like
         (149 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118734-1|AAM50594.1|  260|Drosophila melanogaster GH04238p pro...    73   2e-13
AE013599-3716|AAF47088.1|  260|Drosophila melanogaster CG5597-PA...    73   2e-13
AY071285-1|AAL48907.1|  263|Drosophila melanogaster RE31221p pro...    64   7e-11
AE013599-3491|AAF46918.2|  263|Drosophila melanogaster CG13532-P...    64   7e-11
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros...    28   4.5  
BT010225-1|AAQ23543.1| 1173|Drosophila melanogaster RE72153p pro...    28   6.0  

>AY118734-1|AAM50594.1|  260|Drosophila melanogaster GH04238p
           protein.
          Length = 260

 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 2/108 (1%)

Query: 39  IIQYGVQDAVILDCDYTYGNNTSGLMVKWFFKNNARPVYQWIVPQKPQDMGILRGRVDLT 98
           ++Q    +  ILDCDY    +   + VKW+   + + +YQWI    P  +   R  +D T
Sbjct: 33  VLQNEEMEPTILDCDYEVEESPKFITVKWY--RDDKSIYQWIFGTPPYAIPEFRNEIDST 90

Query: 99  YRASNDPLKMHRALRIVKPNTDISGDYTCVVSTFMEEDSRTKQMTVFE 146
           Y +S +P K + +L ++ P    +GDY CVV T +   S  +++ V +
Sbjct: 91  YESSTEPSKQYSSLALINPTIATTGDYKCVVQTSLNTFSSHQRVQVID 138


>AE013599-3716|AAF47088.1|  260|Drosophila melanogaster CG5597-PA
           protein.
          Length = 260

 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 2/108 (1%)

Query: 39  IIQYGVQDAVILDCDYTYGNNTSGLMVKWFFKNNARPVYQWIVPQKPQDMGILRGRVDLT 98
           ++Q    +  ILDCDY    +   + VKW+   + + +YQWI    P  +   R  +D T
Sbjct: 33  VLQNEEMEPTILDCDYEVEESPKFITVKWY--RDDKSIYQWIFGTPPYAIPEFRNEIDST 90

Query: 99  YRASNDPLKMHRALRIVKPNTDISGDYTCVVSTFMEEDSRTKQMTVFE 146
           Y +S +P K + +L ++ P    +GDY CVV T +   S  +++ V +
Sbjct: 91  YESSTEPSKQYSSLALINPTIATTGDYKCVVQTSLNTFSSHQRVQVID 138


>AY071285-1|AAL48907.1|  263|Drosophila melanogaster RE31221p
           protein.
          Length = 263

 Score = 64.1 bits (149), Expect = 7e-11
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 7/100 (7%)

Query: 46  DAVILDCDYTYGNNTSGLMVKWFFKNNARPVYQWIVPQKPQDMGILRGRVDLT-YRASND 104
           D ++LDC+   G    G ++KW F N++  +YQWI   K   MG ++ ++D   +     
Sbjct: 46  DPLVLDCEVEIGPREQGFVLKWLFNNHS--IYQWIPSVKGFAMGFMKSKIDTKIFTMEGS 103

Query: 105 PLKMHRALRIVKPNTDISGDYTCVVSTFMEEDSRTKQMTV 144
           P      + I  P+ +++G+YTC V TF   D R+ ++ +
Sbjct: 104 P----GVISIKNPDWNMTGEYTCAVQTFESTDKRSARLQI 139


>AE013599-3491|AAF46918.2|  263|Drosophila melanogaster CG13532-PA
           protein.
          Length = 263

 Score = 64.1 bits (149), Expect = 7e-11
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 7/100 (7%)

Query: 46  DAVILDCDYTYGNNTSGLMVKWFFKNNARPVYQWIVPQKPQDMGILRGRVDLT-YRASND 104
           D ++LDC+   G    G ++KW F N++  +YQWI   K   MG ++ ++D   +     
Sbjct: 46  DPLVLDCEVEIGPREQGFVLKWLFNNHS--IYQWIPSVKGFAMGFMKSKIDTKIFTMEGS 103

Query: 105 PLKMHRALRIVKPNTDISGDYTCVVSTFMEEDSRTKQMTV 144
           P      + I  P+ +++G+YTC V TF   D R+ ++ +
Sbjct: 104 P----GVISIKNPDWNMTGEYTCAVQTFESTDKRSARLQI 139


>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
           Drosophila melanogastertransposable element 297. ).
          Length = 1059

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 79  WIVPQKPQDMGILRGRVDLTYRASND 104
           W+VP+KP   G  + RV + YR  N+
Sbjct: 247 WVVPKKPDASGANKYRVVIDYRKLNE 272


>BT010225-1|AAQ23543.1| 1173|Drosophila melanogaster RE72153p
           protein.
          Length = 1173

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 4/104 (3%)

Query: 44  VQDAVILDCDYTYGNNTSGL--MVKWFFKNNARPVYQWIVPQKPQDMGILRGRVDLTYRA 101
           V   V L CD   G        +V W+ + N +P+Y +    +P ++GI      +  + 
Sbjct: 48  VGSEVALPCDLVPGTGIVDKVQLVIWYRQGNVKPIYTFDARGRPLNLGIPWADESVFNKK 107

Query: 102 SNDPLKMH-RALRIVKPNTDISGDYTCVVSTFMEEDSRTKQMTV 144
           ++        ALRI    T  +G Y C V  F +  +R  ++ V
Sbjct: 108 AHFHHDTDPPALRIKNIQTSDAGLYKCRVD-FHKSPTRNWRINV 150


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.323    0.138    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,413,182
Number of Sequences: 52641
Number of extensions: 285991
Number of successful extensions: 560
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 549
Number of HSP's gapped (non-prelim): 6
length of query: 149
length of database: 24,830,863
effective HSP length: 79
effective length of query: 70
effective length of database: 20,672,224
effective search space: 1447055680
effective search space used: 1447055680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)