GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001107-TA|BGIBMGA001107-PA|IPR002048|Calcium-binding
EF-hand
         (322 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450 pr...    25   3.8  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   8.7  

>AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 3/26 (11%)

Query: 33  DAEHYRNEHHNKQFDHDAFLGEDQAK 58
           D EH+ N    +QFD D F  E +AK
Sbjct: 407 DPEHFPNP---EQFDPDRFTAEQEAK 429


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 54  EDQAKTFDQLSPEESKRRLGEIADKIDSDQDGFITLVELK 93
           E+ AK   ++   ++ + +GE   K+   Q+G + L+ELK
Sbjct: 128 EELAKLLKEMKQSDALKSVGETISKVRRAQNGGM-LLELK 166


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.134    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 352,756
Number of Sequences: 2123
Number of extensions: 15730
Number of successful extensions: 64
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 64
Number of HSP's gapped (non-prelim): 2
length of query: 322
length of database: 516,269
effective HSP length: 64
effective length of query: 258
effective length of database: 380,397
effective search space: 98142426
effective search space used: 98142426
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)