GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001106-TA|BGIBMGA001106-PA|IPR008991|Translation protein
SH3-like, IPR001147|Ribosomal protein L21e
         (159 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           27   0.37 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   1.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   1.5  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   1.5  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   1.5  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   4.6  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    23   6.1  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 26.6 bits (56), Expect = 0.37
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 102  RQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPP 135
            R++  +R +E  +L  EA  A +  N + QP PP
Sbjct: 1101 REEDERRTEERRQLHNEANRAYRQRNRRSQPTPP 1134


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 13/44 (29%), Positives = 23/44 (52%)

Query: 110 KENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPI 153
           K +ER  K+++       L++  + P++   V GT  P L+A I
Sbjct: 486 KHHERCAKQSETTRIEKQLEQFESAPRSKLAVYGTNMPALVARI 529


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 24   TIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRG 82
            T  L  Y   Y+   I  + G   V  GM  K +    G  Y+ T +A     NK+ +G
Sbjct: 1745 TSHLKEYFAFYE-NFITQVHGTSHVMSGMVAKAHPSCEGFPYSRTIYANDPTENKQYQG 1802


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 13/48 (27%), Positives = 23/48 (47%)

Query: 97  KHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGT 144
           KH  C  +     +E +++ KEA    +T+NL +     +A  +  GT
Sbjct: 323 KHRLCELNREPTEREEQQMQKEAAVMARTMNLNQVCLCFRAYRVEPGT 370


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 93  VEHVKHSKCRQ-DFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGTEK 146
           +E  K ++ RQ   +++ KE   L+K+ KAA KT+  + +    KA   V    K
Sbjct: 859 LETFKQAEARQRQEIEKDKEKIELMKQEKAAHKTLVDQMEEEMAKARREVQALAK 913


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 8/22 (36%), Positives = 15/22 (68%)

Query: 63  RVYNVTAHALGVIVNKRVRGRI 84
           R ++V    LG+++N+ +RG I
Sbjct: 474 RAFDVIERELGLVLNEALRGEI 495


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 12/52 (23%), Positives = 24/52 (46%)

Query: 64  VYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERL 115
           ++ +  H  GV+V+ + R          + EH++H   R    K  + NE++
Sbjct: 117 LFQIGQHVRGVLVSIKSRMMAYTNDAVAKFEHLRHRTMRAVKRKMDELNEQI 168


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.138    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,608
Number of Sequences: 2123
Number of extensions: 5720
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 8
length of query: 159
length of database: 516,269
effective HSP length: 59
effective length of query: 100
effective length of database: 391,012
effective search space: 39101200
effective search space used: 39101200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)