GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001104-TA|BGIBMGA001104-PA|undefined
         (56 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025817-1|ABF85717.1|  510|Drosophila melanogaster IP02915p pro...    28   1.8  
AE014296-3004|AAF49275.1|  510|Drosophila melanogaster CG5137-PA...    28   1.8  
M19692-1|AAA28934.1| 1520|Drosophila melanogaster protein ( D.me...    26   5.5  
AY058497-1|AAL13726.1| 1249|Drosophila melanogaster LD03455p pro...    26   5.5  
AE014296-2776|AAF49431.2| 1620|Drosophila melanogaster CG4032-PA...    26   5.5  
AY084212-1|AAL89950.1| 1211|Drosophila melanogaster SD08909p pro...    25   9.5  
AY075386-1|AAL68224.1| 1294|Drosophila melanogaster LD24110p pro...    25   9.5  
AE014296-1521|AAF50366.2| 1294|Drosophila melanogaster CG32030-P...    25   9.5  
AE014296-1520|AAF50365.2| 1393|Drosophila melanogaster CG32030-P...    25   9.5  

>BT025817-1|ABF85717.1|  510|Drosophila melanogaster IP02915p
          protein.
          Length = 510

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 6  VPPEP-ERASESAKQAIERHNRLKRWLVTHLYLF---PRDVRASSS 47
          V P P  RA+E   + +  H R K W+ T LYL    P+D++A  S
Sbjct: 53 VGPHPLRRATEMINEHLHDH-RAKLWMGTKLYLVDCNPKDIQALCS 97


>AE014296-3004|AAF49275.1|  510|Drosophila melanogaster CG5137-PA
          protein.
          Length = 510

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 6  VPPEP-ERASESAKQAIERHNRLKRWLVTHLYLF---PRDVRASSS 47
          V P P  RA+E   + +  H R K W+ T LYL    P+D++A  S
Sbjct: 53 VGPHPLRRATEMINEHLHDH-RAKLWMGTKLYLVDCNPKDIQALCS 97


>M19692-1|AAA28934.1| 1520|Drosophila melanogaster protein (
            D.melanogaster tyrosinekinase gene, exons 3 to 10 (with a
            region homologous tothe Abelson oncogene). ).
          Length = 1520

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 11/18 (61%), Positives = 13/18 (72%)

Query: 7    PPEPERASESAKQAIERH 24
            PP P  A ESA QAI++H
Sbjct: 1090 PPPPPPAPESAVQAIQQH 1107


>AY058497-1|AAL13726.1| 1249|Drosophila melanogaster LD03455p
           protein.
          Length = 1249

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 11/18 (61%), Positives = 13/18 (72%)

Query: 7   PPEPERASESAKQAIERH 24
           PP P  A ESA QAI++H
Sbjct: 702 PPPPPPAPESAVQAIQQH 719


>AE014296-2776|AAF49431.2| 1620|Drosophila melanogaster CG4032-PA
            protein.
          Length = 1620

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 11/18 (61%), Positives = 13/18 (72%)

Query: 7    PPEPERASESAKQAIERH 24
            PP P  A ESA QAI++H
Sbjct: 1073 PPPPPPAPESAVQAIQQH 1090


>AY084212-1|AAL89950.1| 1211|Drosophila melanogaster SD08909p
           protein.
          Length = 1211

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 11/18 (61%), Positives = 11/18 (61%)

Query: 3   KCHVPPEPERASESAKQA 20
           KC VPPEPE  S   K A
Sbjct: 456 KCDVPPEPEPLSPVKKPA 473


>AY075386-1|AAL68224.1| 1294|Drosophila melanogaster LD24110p
           protein.
          Length = 1294

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 11/18 (61%), Positives = 11/18 (61%)

Query: 3   KCHVPPEPERASESAKQA 20
           KC VPPEPE  S   K A
Sbjct: 638 KCDVPPEPEPLSPVKKPA 655


>AE014296-1521|AAF50366.2| 1294|Drosophila melanogaster CG32030-PB,
           isoform B protein.
          Length = 1294

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 11/18 (61%), Positives = 11/18 (61%)

Query: 3   KCHVPPEPERASESAKQA 20
           KC VPPEPE  S   K A
Sbjct: 638 KCDVPPEPEPLSPVKKPA 655


>AE014296-1520|AAF50365.2| 1393|Drosophila melanogaster CG32030-PA,
           isoform A protein.
          Length = 1393

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 11/18 (61%), Positives = 11/18 (61%)

Query: 3   KCHVPPEPERASESAKQA 20
           KC VPPEPE  S   K A
Sbjct: 638 KCDVPPEPEPLSPVKKPA 655


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.125    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,773,296
Number of Sequences: 52641
Number of extensions: 69414
Number of successful extensions: 270
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 263
Number of HSP's gapped (non-prelim): 9
length of query: 56
length of database: 24,830,863
effective HSP length: 37
effective length of query: 19
effective length of database: 22,883,146
effective search space: 434779774
effective search space used: 434779774
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)