GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001103-TA|BGIBMGA001103-PA|undefined
         (159 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       22   2.8  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   2.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   2.8  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   5.0  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      20   8.7  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 9/37 (24%), Positives = 19/37 (51%)

Query: 69  KLEMWKKELRNKVAKKTAEAQAAKDKKERLVEEVRRH 105
           ++++W +  R K+ K+    +   ++  R  EE  RH
Sbjct: 49  QIKIWFQNRRMKLKKELRAVKEINEQARREREEQERH 85


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 9/37 (24%), Positives = 19/37 (51%)

Query: 69  KLEMWKKELRNKVAKKTAEAQAAKDKKERLVEEVRRH 105
           ++++W +  R K+ K+    +   ++  R  EE  RH
Sbjct: 200 QIKIWFQNRRMKLKKELRAVKEINEQARREREEQERH 236


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 9/37 (24%), Positives = 19/37 (51%)

Query: 69  KLEMWKKELRNKVAKKTAEAQAAKDKKERLVEEVRRH 105
           ++++W +  R K+ K+    +   ++  R  EE  RH
Sbjct: 259 QIKIWFQNRRMKLKKELRAVKEINEQARREREEQERH 295


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 12/53 (22%), Positives = 28/53 (52%), Gaps = 5/53 (9%)

Query: 73  WKKELRN-KVAKKTAEAQAAKDKKERL----VEEVRRHFGFKLDSRDERFQEM 120
           W+K  +N + AK++ +A+ AK+ +  +    +E    H  F  D+  +  +++
Sbjct: 139 WEKRRKNNEAAKRSRDARRAKEDEIAIRCAFLERENCHLKFVTDTLKKELEKL 191


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 42  METTRQKRLAEEEKILKRDQEIVAKMAKLEMW 73
           M+TT +K + E   IL  D+ +        +W
Sbjct: 239 MQTTNEKEIFERLSILPVDEFLQISEEVANIW 270


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.312    0.126    0.344 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,351
Number of Sequences: 317
Number of extensions: 747
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 159
length of database: 114,650
effective HSP length: 52
effective length of query: 107
effective length of database: 98,166
effective search space: 10503762
effective search space used: 10503762
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.0 bits)
S2: 40 (20.2 bits)