Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001103-TA|BGIBMGA001103-PA|undefined
(159 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 42 6e-05
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 36 0.003
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 33 0.027
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 32 0.035
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 32 0.047
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.061
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 31 0.061
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 31 0.081
SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2... 31 0.081
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 31 0.11
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 30 0.14
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 29 0.25
SPCC1223.07c |||aspartate-tRNA ligase |Schizosaccharomyces pombe... 29 0.33
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 29 0.33
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 28 0.57
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 28 0.57
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 28 0.76
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 28 0.76
SPAC17G6.07c |||SNARE Slt1 |Schizosaccharomyces pombe|chr 1|||Ma... 28 0.76
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 27 1.3
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 27 1.3
SPAC31G5.18c |||ubiquitin family, human C1ORF55 related|Schizosa... 27 1.7
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 27 1.7
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 27 1.7
SPAC328.08c |||tubulin specific chaperone cofactor C |Schizosacc... 27 1.7
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 27 1.7
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 26 2.3
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 26 2.3
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 26 2.3
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 26 3.1
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 26 3.1
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 3.1
SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr 1|||Ma... 26 3.1
SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase |Schizosac... 25 4.0
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 25 4.0
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 25 4.0
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 25 5.3
SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 5.3
SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein Did4... 25 5.3
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 25 5.3
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 25 7.1
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 25 7.1
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 25 7.1
SPBC1347.04 |tim54||TIM22 inner membrane protein import complex ... 25 7.1
SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo... 24 9.3
SPBC83.15 |||ribosome biogenesis protein Nsa1|Schizosaccharomyce... 24 9.3
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 41.5 bits (93), Expect = 6e-05
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 25 EKLEYESEAYPFTIQEMMETTRQKRL-AEEEKILKRDQEIVAKMAKLEMWKKELRNKVAK 83
E L +SEA ++E+ E T+Q RL A+ E I K + E +++ +L + E +K+ +
Sbjct: 44 ESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLR 103
Query: 84 KTAEAQAAKDKKERLVEEVRRHFGFKLDSRDERFQEM 120
+T E D K E + + D +++ +EM
Sbjct: 104 ETTEKMRQTDVKAEHFERRVQSLERERDDMEQKLEEM 140
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 35.9 bits (79), Expect = 0.003
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 20 RADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRN 79
+A+ + +LE E A ++ +K E E+ KR+ E AK E K+E
Sbjct: 548 KAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEE 607
Query: 80 KVAKKTAEAQAAKDKKERLVEEVRRHFGFKLDSRDERFQE 119
K AK+ AE +A ++ +E+ E + + + +R E
Sbjct: 608 K-AKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAE 646
Score = 35.9 bits (79), Expect = 0.003
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 21 ADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNK 80
A+ + K E E +A ++ +K E E+ KR+ E AK E K+E K
Sbjct: 613 AEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEK 672
Query: 81 VAKKTAEAQAAKDKKERLVEEVRRHFGFKLDSRDER 116
AK+ AE A ++ +E++ E + K + +R
Sbjct: 673 -AKREAEENAKREAEEKVKRETEENAKRKAEEEGKR 707
Score = 34.7 bits (76), Expect = 0.007
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 21 ADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNK 80
A+ + K E E +A + +K E E+ KR+ E AK E K+E K
Sbjct: 581 AEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEK 640
Query: 81 VAKKTAEAQAAKDKKERLVEEVRRHFGFKLDSRDERFQE 119
AK+ AE +A ++ +E+ E + + + + +R E
Sbjct: 641 -AKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAE 678
Score = 30.7 bits (66), Expect = 0.11
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 23 IREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVA 82
I+++++ ++EA E +K E E+ KR+ E AK E K+E K A
Sbjct: 533 IQQRIQEKAEA------EAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEK-A 585
Query: 83 KKTAEAQAAKDKKERLVEEVRRHFGFKLDSRDERFQE 119
K+ AE +A ++ +E E + + + +R E
Sbjct: 586 KREAEEKAKREAEENAKREAEEKAKREAEEKAKREAE 622
Score = 29.1 bits (62), Expect = 0.33
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 20 RADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRN 79
+A+ K + E +A + ++ E E+ KR+ E AK E K+E
Sbjct: 540 KAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEE 599
Query: 80 KVAKKTAEAQAAKDKKERLVEEVRRHFGFKLDSRDERFQE 119
AK+ AE +A ++ +E+ E + + + +R E
Sbjct: 600 N-AKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAE 638
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 32.7 bits (71), Expect = 0.027
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 25 EKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEI-VAKMAKLEMWKKELRNKVAK 83
++L+ E E ++ +QK+ E+K+ K+ QE KMA+ ++ LR + K
Sbjct: 644 QRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAR----EQRLREEEEK 699
Query: 84 KTAEAQAAKDKKERLVEEVRRHFGFKLDSRDE 115
+ E + ++K ++ EE RR + +S ++
Sbjct: 700 RILEERKRREKLDKEEEERRRRELLEKESEEK 731
Score = 31.1 bits (67), Expect = 0.081
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 39 QEMMETTRQK--RLAEEEKILKRDQEIVAKMAKLEMWKKE--LRNKVAKKTAEAQAAKDK 94
Q+ +E RQ+ R EE+ LKR+QE K +LE K+E + K +K + Q +
Sbjct: 626 QKALEAKRQEEARKKREEQRLKREQE--KKQQELERQKREEKQKQKEREKKLKKQQQEAD 683
Query: 95 KERLVEEVR 103
+E++ E R
Sbjct: 684 REKMAREQR 692
Score = 29.9 bits (64), Expect = 0.19
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 10/85 (11%)
Query: 24 REKLEYESEAYPFTIQEMMETTRQKRLAEEEKIL----KRDQEIVAKMAKLEMWKKELRN 79
REK+ + +A ++E+ E ++K+ E +KI KRD++ K+AK ++E +
Sbjct: 561 REKVAQQRQAK--LLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAK----EEERQR 614
Query: 80 KVAKKTAEAQAAKDKKERLVEEVRR 104
+ A++ AE A K + + EE R+
Sbjct: 615 REAERLAEQAAQKALEAKRQEEARK 639
Score = 25.0 bits (52), Expect = 5.3
Identities = 16/80 (20%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 24 REKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAK 83
RE+ + + E ++ E R+K E+ + ++ I+ + + E KE + +
Sbjct: 662 REEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRILEERKRREKLDKEEEERRRR 721
Query: 84 KTAEAQAAKDKKERLVEEVR 103
+ E ++ ++KER + E +
Sbjct: 722 ELLEKES--EEKERRLREAK 739
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 32.3 bits (70), Expect = 0.035
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 39 QEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDK 94
++ E R K+LA+EEK LK+ +E A+ A+ + +KE R K AK+ + A D+
Sbjct: 717 EQAKEAKRLKKLAKEEKRLKKKEE-KARKAEEKRLQKE-RAKYAKQMSRESAHADQ 770
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 31.9 bits (69), Expect = 0.047
Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 39 QEMMETTRQKRLAEEEKILK---RDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKK 95
QE + +++ +++ + I + E ++K +KLE + L+NKV++ E A
Sbjct: 954 QEEISNLKEENMSQSQAITSVKSKLDETLSKSSKLEADIEHLKNKVSEVEVERNALLASN 1013
Query: 96 ERLVEEVRRH 105
ERL+++++ +
Sbjct: 1014 ERLMDDLKNN 1023
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 31.5 bits (68), Expect = 0.061
Identities = 23/118 (19%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Query: 42 METTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKERLVEE 101
+E + K L E +I KR+ ++ K L+ +K+L N++ K ++ ++ +L E
Sbjct: 205 LEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLENRLLKVEEHEKSLNERATKL-SE 263
Query: 102 VRRHFGFKLDSRDERFQEMXXXXXXXXXXXXXXXXXXXXXXXMIAKLQQKNAEISENK 159
+F + +ER + +I L++K ++I+ K
Sbjct: 264 ANENFNNRFKEFEEREKSAIKQNKEQSSEGSKTANQTHEQKELINSLEKKVSDIALEK 321
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 31.5 bits (68), Expect = 0.061
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 39 QEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKERL 98
+E + R+AEEEK L +E + A+L+ +KE + K K +K +KE+
Sbjct: 263 EEQRIREEEARIAEEEKRLAEVEEARKEEARLKKKEKERKKKEEMKAQGKYLSKKQKEQQ 322
Query: 99 VEEVRR 104
RR
Sbjct: 323 ALAQRR 328
Score = 28.3 bits (60), Expect = 0.57
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 38 IQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKER 97
+Q+M+E +KR EEE+ R++E A++A+ E K L + EA+ K +KER
Sbjct: 250 LQKMLE---EKRAREEEEQRIREEE--ARIAEEE---KRLAEVEEARKEEARLKKKEKER 301
Query: 98 LVEEVRRHFGFKLDSRDERFQEM 120
+E + G L + + Q +
Sbjct: 302 KKKEEMKAQGKYLSKKQKEQQAL 324
Score = 27.9 bits (59), Expect = 0.76
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 23 IREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNK-- 80
+ EK E E +E +KRLAE E+ K + + K K K+E++ +
Sbjct: 254 LEEKRAREEEEQRIREEEARIAEEEKRLAEVEEARKEEARL-KKKEKERKKKEEMKAQGK 312
Query: 81 -VAKKTAEAQA-AKDKKERLVEEVRRHFGFKLDSRDER 116
++KK E QA A+ + ++++E R G + ++
Sbjct: 313 YLSKKQKEQQALAQRRLQQMLESGVRVAGLSNGEKKQK 350
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 31.1 bits (67), Expect = 0.081
Identities = 12/52 (23%), Positives = 31/52 (59%)
Query: 53 EEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKERLVEEVRR 104
E ++LKR++++ ++AKL +L +++ +++ +A + K E +R+
Sbjct: 371 ESQLLKREKQLSEELAKLRSTNAQLTDRITQESKKASFLEQKASEQEEVIRK 422
>SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 31.1 bits (67), Expect = 0.081
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 33 AYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAK 92
++P+ + + E QKR+ EEEK+ +R V + E E + + K AEA A
Sbjct: 53 SFPYKDKILAEIEEQKRIREEEKLARRASGQVDAAMEEEDAVDENGSLMISKIAEAAQAS 112
Query: 93 ---DKKERLVEE 101
D++E ++EE
Sbjct: 113 NPDDEEEFVMEE 124
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 30.7 bits (66), Expect = 0.11
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 26 KLEYESEA----YPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEM--WKKELRN 79
KL YE Y + + E QK+ A+EE+I +++ E + + + + +K+LR
Sbjct: 56 KLSYEGNRKKRIYNGSAEAGKEKKLQKQRAQEERIRQKEAERLKREKERQQREQEKKLRE 115
Query: 80 K---VAKKTAEAQAAKDKKERLVEEVRRHFGFKLDSRDERFQE 119
+ AKK E + + ++ RL E+ RR + RD++ +E
Sbjct: 116 QEKIAAKKMKELEKLEKERIRLQEQQRRK-----EERDQKLRE 153
Score = 30.3 bits (65), Expect = 0.14
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 40 EMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKERLV 99
E ++ ++++ E+EK L+ ++I AK K E+ K E ++ + +D+K R
Sbjct: 96 ERLKREKERQQREQEKKLREQEKIAAKKMK-ELEKLEKERIRLQEQQRRKEERDQKLREK 154
Query: 100 EEVRR 104
EE +R
Sbjct: 155 EEAQR 159
Score = 27.9 bits (59), Expect = 0.76
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 39 QEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKE 96
+E + ++K+L E+EKI + + ++ KLE + L+ + +K Q ++K+E
Sbjct: 102 KERQQREQEKKLREQEKIAAKKMK---ELEKLEKERIRLQEQQRRKEERDQKLREKEE 156
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 30.3 bits (65), Expect = 0.14
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 23 IREKLEYESEAYPFTIQEMMETTRQK--RLAEEEKILKRDQEIVAKMAKLEMWKKELRNK 80
I+ ++EYE ++ ++K RLAEEE +LK QE + +L+ +++++ +
Sbjct: 857 IQAQIEYEKSVAAKLEDARIQREKEKARRLAEEEALLKEKQE---RERQLQEERQKMQEE 913
Query: 81 VAKKTAEAQAAKDKKERLVEEVRRHFGFK 109
V + Q A + L ++ + G K
Sbjct: 914 VLEWRKSQQKASEDDMSLSDDEEKQSGKK 942
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 29.5 bits (63), Expect = 0.25
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 26 KLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRN 79
K E S+ P + +ET R+ ++++L+R EI+ K L KKE +N
Sbjct: 1177 KFESVSQKAPIFEAKGIETVRRDGTPVQQQLLRRCLEILFKTKDLSTVKKEFQN 1230
>SPCC1223.07c |||aspartate-tRNA ligase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 580
Score = 29.1 bits (62), Expect = 0.33
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 53 EEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKERLVEEV 102
+E IL D + ++K A L+ +KE + +K EA+ A++KK+R E+
Sbjct: 21 KEVILGEDGKPLSKKA-LKKLEKEREKEQKRKEREAREAEEKKKREANEI 69
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 29.1 bits (62), Expect = 0.33
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 48 KRL--AEEEKILKRDQEI--VAKMAKLEM---WK---KELRNKVAKKTAEAQAAKDKKER 97
KRL A+E+K + D+ I +AK E+ WK +E+R + A++ AEAQ K++
Sbjct: 155 KRLSGADEKKAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRRRRAERAAEAQRVAGKEQ- 213
Query: 98 LVEEVRRHFGFKLDSRDER 116
+ + +H L++R ER
Sbjct: 214 -LANILKHSTDLLEARIER 231
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 28.3 bits (60), Expect = 0.57
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 24 REKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAK 83
+E+LE ++ T ++ + + EE K +QEI K + E ++ + KV+K
Sbjct: 72 KEELESHVDSEIETSKDESSVNKVEEKVEEFKEDNVEQEIKQKRSLSESPQESMLEKVSK 131
Query: 84 KTAEAQAAKDK-KERLVEEVRRHFGFKLDSRDER 116
K ++A ++ VE + + +DE+
Sbjct: 132 KPKVSEAHNEEISPENVETIENELDLPVKGKDEQ 165
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 28.3 bits (60), Expect = 0.57
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 22 DIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAK-----LEMWKKE 76
D ++ L SE P Q+ + + ++ E E + KR+QE++ + E +K
Sbjct: 128 DKQQLLLESSEPTPTIKQQFNDRKKNAQIREREALAKREQEMIEDRRQRIKEVTENLEKR 187
Query: 77 LRNKVAKKTAEAQAAKDKKERLVEE 101
L + +AK T E + +E+ +E
Sbjct: 188 LDDWIAKATTE-EGLNALREKYTQE 211
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 27.9 bits (59), Expect = 0.76
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 37 TIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEM----WKKE---LRNKVAKKTAEAQ 89
T+ R + + E+EK K Q++ K E W++E +N+V++ + +
Sbjct: 148 TLSTQYSIQRSQWVREDEKKKKEIQDLKELYEKSEHGAKNWERERETFQNQVSQMSKQLD 207
Query: 90 AAKDKKERLVEEVRRHFGFKLDSRDE 115
+ + ER EE+R F + R+E
Sbjct: 208 SLEKLCERKDEEIRSSQAFNMTLREE 233
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 27.9 bits (59), Expect = 0.76
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 34 YPFTIQEMMETTR--QKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAA 91
Y TI E+ + QKR+AEE K L ++E V K++ E+ + R+ + +
Sbjct: 407 YVRTIYELRQKVSILQKRIAEESKQLALNKE-VRKISSREIKMLDARSMLKN---SFDGS 462
Query: 92 KDKKERLVEEVR 103
+D ++ L+E VR
Sbjct: 463 RDLQKSLIEHVR 474
>SPAC17G6.07c |||SNARE Slt1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 222
Score = 27.9 bits (59), Expect = 0.76
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 42 METTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAK 92
+ T +K+L EEK +K QE A + ++ELR + EA A+
Sbjct: 71 LNVTMEKKLKIEEKKIKSKQEKEIAHALQSIQERELRERQQMSNVEASNAQ 121
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.1 bits (57), Expect = 1.3
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 22 DIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKV 81
+IR+++ E E + E+ T K L E + ++ + K+ K+ W K+L+++
Sbjct: 454 EIRQQMTREMEE---RVSEVERTFLTKLLEESAQGIEYTDQ---KLEKMGGWMKKLQDEN 507
Query: 82 AKKTAEAQAAKDKKERLVEEVR 103
++KT + E L EE+R
Sbjct: 508 SEKTETIAQLEQIIEELHEELR 529
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 27.1 bits (57), Expect = 1.3
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 24 REKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNK-VA 82
R+KLE +AY E+ QK E+++ + +++I + K E ++++N+ +A
Sbjct: 135 RKKLESRRQAY--------ESLLQKSFKEKKEDSRLEEDIRLALYKFEESTEQVKNRMIA 186
Query: 83 KKTAEAQAAKDKKERLVEEV 102
K EA + E +V E+
Sbjct: 187 LKDVEADQYQQLTELIVYEL 206
>SPAC31G5.18c |||ubiquitin family, human C1ORF55
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 263
Score = 26.6 bits (56), Expect = 1.7
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 75 KELRNKVAKKTAEAQAAKDKKERLVEEVRRHFGFKLDSRDERFQE 119
KEL +AKK AE +A K+ K++ + +V DS RF +
Sbjct: 127 KELSEYLAKKPAETRAKKEAKKQKLNKV-----LAADSSSSRFDD 166
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 26.6 bits (56), Expect = 1.7
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 35 PFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDK 94
P T +E E + RL EEE+ LK++ E+ ++ + + T+E K K
Sbjct: 932 PLTEREKFE--EEDRLREEEEALKQEIELSSRRGNRPYPSSAVESPSYSGTSE---RKSK 986
Query: 95 KERLVEEV 102
K+ L +EV
Sbjct: 987 KQMLKDEV 994
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 26.6 bits (56), Expect = 1.7
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 51 AEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKERLVEEVRRHFGFKL 110
A + K+ + ++E V +M ++ KE++ + ++ EAQ +K K+ V + + G +
Sbjct: 255 AVKAKVKEYEEEYVPEMERM----KEIQRQTKERQKEAQLSKLMKDMHVSKDKEDVGLTV 310
Query: 111 -DSRDE 115
D+ DE
Sbjct: 311 SDAEDE 316
>SPAC328.08c |||tubulin specific chaperone cofactor C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 259
Score = 26.6 bits (56), Expect = 1.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 74 KKELRNKVAKKTAEAQAAKDKKERLVEEVRRHFG 107
+KE K+ K T Q ++ +KE +EE ++ G
Sbjct: 9 RKEFLTKLYKSTPSEQTSRSEKETWLEEKSKYLG 42
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.6 bits (56), Expect = 1.7
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 40 EMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTA 86
E + +++ +EEK LK+D+++ KM K + K+L K K A
Sbjct: 403 EKVSQSKKGAKVKEEKGLKKDRKLPKKMRKAQ---KKLERKAGKAVA 446
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 26.2 bits (55), Expect = 2.3
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 23 IREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVA 82
I++ ++ SE + IQ ++ +K + EEE+ + E K K+E E K
Sbjct: 191 IKDTVKKHSEFISYPIQLVVTREVEKEVPEEEETEEVKNEEDDKAPKIEEVDDESEKK-E 249
Query: 83 KKTAEAQAAKDKKERL 98
KKT + + + E L
Sbjct: 250 KKTKKVKETTTETEEL 265
Score = 25.0 bits (52), Expect = 5.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 76 ELRNKVAKKTAEAQAAKDKKERLVEEVRRHFGFKLD 111
EL+ KV + AE ++ KD L E GF LD
Sbjct: 620 ELKKKVEENGAEDRSVKDLATILYETALLSSGFTLD 655
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 2.3
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 26 KLEYESEAYPFTIQEMMETTRQKRLAEEEKIL------KRDQEIVAKMAKLEMWKKELRN 79
K + ESEA +QE + +R+ E++ + K +E+ AK LE+ ++L +
Sbjct: 592 KQKQESEAESLRVQEEINKRNAERIRREKEAIRINEAKKLAEELKAK-GGLEVNAEDLEH 650
Query: 80 KVAKKTAEAQAAK-DKKERLVEEVRRHFGFKLDSRDERFQ 118
A K Q + +K+ + + E R G ++D + ++
Sbjct: 651 LDADKLRAMQIEQVEKQNKSMNERLRVIGKRIDHLERAYR 690
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 26.2 bits (55), Expect = 2.3
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 46 RQKRLAE-EEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKERL 98
RQKR E ++++LK ++ ++ K + K + NK+ K+ + AK +ER+
Sbjct: 65 RQKRKQELKDQLLKENEGSISSKKKKRL-DKYIENKLKKEEVASLIAKLAEERI 117
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 25.8 bits (54), Expect = 3.1
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 38 IQEMMETTRQKRLA-----EEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAA 91
I ME+ QK + EEE+I ++ +E ++A E K+ + KKT +Q A
Sbjct: 625 ISAAMESVNQKNVLKAQKEEEERIAQQKREEKRRLAYEESLKRHAKKLHEKKTKSSQDA 683
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 25.8 bits (54), Expect = 3.1
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 15 LCWPTRADIREKLEYESEAY-PFTIQEM--METTRQKRLAEEEKILKR-DQEIVAKMAKL 70
+C T+ +K ++E +A I EM M+ T ++ K+ R ++EI + A+L
Sbjct: 40 ICQKTKTVEAQKDDFEYKAMISAQINEMALMKQTVMDLEMQQSKVKDRYEEEITSLKAQL 99
Query: 71 EMWKKELRNKVAKKTAEAQAAKD 93
E +KE+ + V ++++ + ++
Sbjct: 100 EARRKEIASGVVPQSSKTKHGRN 122
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 25.8 bits (54), Expect = 3.1
Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 25 EKLEYESEAYPFTIQEMMETTRQKRLAEEE----KILKRDQEIVAKMAKLEMWKKELRNK 80
E L A +E++ T Q+RLA E + ++++ + + A L+ EL ++
Sbjct: 865 ENLLTTERAIALDKEEILRRT-QERLANIEDSFSETKQQNENLQRESASLKQINNELESE 923
Query: 81 VAKKTAEAQAAKDKKERLVEEVRRHFGFKLDSRDE 115
+ +KT++ + ++ L E++ LD++ E
Sbjct: 924 LLEKTSKVETLLSEQNELKEKLSLEEKDLLDTKGE 958
Score = 24.6 bits (51), Expect = 7.1
Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
Query: 38 IQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKE-------LRNKVAKKTAEAQA 90
+++ + + + K + + + KR+QE+ ++A LE K+ LR+++A E +A
Sbjct: 1466 LKDQINSEKAKMFSVQVQYEKREQELQKRIASLEKVNKDSLIDVRALRDRIASLEDELRA 1525
Query: 91 A 91
A
Sbjct: 1526 A 1526
>SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 835
Score = 25.8 bits (54), Expect = 3.1
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 1 MYGK-YGSASGVNPSLCWPTRADIREKLEYESEAYPFTI 38
MYG G ++G N + C P + IR L +++YP I
Sbjct: 424 MYGGGTGPSTGTNATTCTPNKDLIRSMLR-STDSYPMNI 461
>SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.4 bits (53), Expect = 4.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 76 ELRNKVAKKTAEAQAAKDKKERLVEEVRRHFG 107
+LR +V ++T+ AAK ++R + + R FG
Sbjct: 59 QLRREVGRRTSILVAAKSYRQRFIGLMSRAFG 90
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 25.4 bits (53), Expect = 4.0
Identities = 20/87 (22%), Positives = 36/87 (41%)
Query: 33 AYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAK 92
AY +T + ++K EE + K+ +E +K+ +K+L+ K+ Q
Sbjct: 6 AYYYTQTTIPTQQKRKSKKMEELLSKQREECKELQSKITNLRKQLKEGNKKQKRALQQKI 65
Query: 93 DKKERLVEEVRRHFGFKLDSRDERFQE 119
+ E + + KLD DE E
Sbjct: 66 SQMEADLSQKHATERQKLDKGDEETNE 92
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.4 bits (53), Expect = 4.0
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 40 EMMETTRQKRLAEEEKILKRDQEIVAKM--AKLEMWK--KELRNKVAKKTAEAQAAKDKK 95
E+ E+ R + ++ K LKRDQE K+ A L ++ KE K+ + E+
Sbjct: 176 EIFESLRYAKALDQIKGLKRDQETQVKVDQATLTHYRSDKERAEKIELRVHESLKRISCI 235
Query: 96 ERLVEEVRRHFGFKLDSRDERFQ 118
VEE+ + +DE F+
Sbjct: 236 RSKVEELDQEITETARLQDELFK 258
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 25.0 bits (52), Expect = 5.3
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 74 KKELRNKVAKKTAEAQAAKDKKERLVEEVRRHFGFKLDSRDE 115
KK+L NK+ E A D +E L + + + F ++S D+
Sbjct: 22 KKQLENKILHSYEEESAGFDSEE-LEDNDEQGYSFGVNSEDD 62
>SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 233
Score = 25.0 bits (52), Expect = 5.3
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 69 KLEMWKKELRNKVAKKTAEAQAAKDKKER 97
K WK+E+R +VA + E QA ++K R
Sbjct: 186 KNRKWKEEMRQRVASE--EQQAGEEKMAR 212
>SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein
Did4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 25.0 bits (52), Expect = 5.3
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 1 MYGKYGSASGVNPSLCWPTRADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRD 60
M G +G+N S+ P A I ++ E E+E QEM++ L E+++ +
Sbjct: 106 MRGATRLLTGMNKSMNIPAMARITQQFERENEIME-QRQEMIDENMDDALEEDDE--EEA 162
Query: 61 QEIVAKM 67
E+V K+
Sbjct: 163 DELVNKV 169
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 25.0 bits (52), Expect = 5.3
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 40 EMMETTRQKRLAEEE-KILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKERL 98
++ E QK L++ K DQE A E WKK+ + ++ +K E +K +K R
Sbjct: 29 DISEEKPQKELSDASVKSSYVDQEQQA----YENWKKQEQEEINRKKEEELKSKFEKLRQ 84
Query: 99 VEEVRR 104
E RR
Sbjct: 85 KNERRR 90
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 24.6 bits (51), Expect = 7.1
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 60 DQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKK---ERLVEEVRRHFG 107
+ E+ A+LE+ K++ ++ +K AA +KK +RLV E+ + G
Sbjct: 865 ESEVATAEAELELLKEDFASENSKTEKILLAASEKKLVGKRLVSELTKLSG 915
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 24.6 bits (51), Expect = 7.1
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 31 SEAYPFTIQEMMETTRQK---RLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAE 87
S+ P ++++++ ++ R+AEEEK R + + + E W +E K+ E
Sbjct: 681 SKVEPEVVEKLLDEEEEEMIIRMAEEEKEYDRFVSELNQRHETEEWNQE---AFEKRLKE 737
Query: 88 AQAAKDKKERLVEEV 102
+ K ++R +EV
Sbjct: 738 LKNQKRSEKRDADEV 752
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 24.6 bits (51), Expect = 7.1
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 34 YPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELR 78
Y TIQ E KRL+ E++ L+ +Q + K L + K L+
Sbjct: 301 YDLTIQLKEELQSLKRLSSEQQNLQHEQILQWKSDFLNVSKDHLK 345
>SPBC1347.04 |tim54||TIM22 inner membrane protein import complex
subunit Tim54|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 24.6 bits (51), Expect = 7.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 69 KLEMWKKELRNKVAKKTAEAQAAKDKKE 96
KLE K E NK K+ E + KD KE
Sbjct: 173 KLETEKLEANNKEEKEEKEGKDDKDDKE 200
>SPAC4F10.09c |||ribosome biogenesis protein Noc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 24.2 bits (50), Expect = 9.3
Identities = 16/71 (22%), Positives = 28/71 (39%)
Query: 17 WPTRADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKE 76
W D + +LE + E F +EM + E+ + D E +A K +E
Sbjct: 727 WKALVDSKPQLEMDEEESDFDSEEMDKAMTDMGSDSEQSADENDNESMASEEKPMFSDEE 786
Query: 77 LRNKVAKKTAE 87
+++A E
Sbjct: 787 NLSEIAHSEDE 797
>SPBC83.15 |||ribosome biogenesis protein Nsa1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 24.2 bits (50), Expect = 9.3
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 56 ILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKK 95
I +RD EI+ K +LE K+E ++ + + + +DKK
Sbjct: 342 INERDAEIIKKEEELEAAKEE-EEEIWRNMEQLEDTEDKK 380
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.126 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,887
Number of Sequences: 5004
Number of extensions: 18578
Number of successful extensions: 176
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 110
Number of HSP's gapped (non-prelim): 69
length of query: 159
length of database: 2,362,478
effective HSP length: 68
effective length of query: 91
effective length of database: 2,022,206
effective search space: 184020746
effective search space used: 184020746
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 50 (24.2 bits)
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