Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001103-TA|BGIBMGA001103-PA|undefined
(159 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 32 0.010
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 29 0.092
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 28 0.12
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 25 0.86
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 25 0.86
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 24 2.0
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 24 2.0
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 23 3.5
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 23 4.6
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ... 22 8.0
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 31.9 bits (69), Expect = 0.010
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 21 ADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQ-EIVAKMAKLEMWKKELRN 79
A ++ + +E T++++ +KRL E + + K+++ EI AK+E ++
Sbjct: 386 AKVQANMRATNERRKKTLEQI--AAEEKRLLELQDVPKKNKKEIEESEAKIESLTRQKTE 443
Query: 80 KVAKKTAEAQAAKDKKERLVEE 101
AK TA KD+ + L+EE
Sbjct: 444 VEAKLTANLATLKDETKVLLEE 465
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 28.7 bits (61), Expect = 0.092
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 29 YESEAYPFTIQEMMETTR------QKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVA 82
+E E T++E +E +R QK + EE+ L + + V + + KK+ V
Sbjct: 775 FEGETEETTLREELEHSRTILAKLQKGIEEEQAKLDQVRRTVQQEEQTAQAKKDAMGAVE 834
Query: 83 KKTAEAQAAKDKKERLVEEVRRHFGFK 109
+ A QA+ DK+++ +++ + K
Sbjct: 835 AEIARIQASIDKEQQARHDLQTNHKVK 861
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 28.3 bits (60), Expect = 0.12
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 24 REKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAK 83
R KLE E A +E R+ + E++ R+Q + K E +KE R K +
Sbjct: 440 RMKLEEEHRAARLREEERAREAREAAIEREKERELREQREREQREK-EQREKEQREKEER 498
Query: 84 KTAEAQAAKDKKERLVEEVRRHFGFKLDSRDERFQE 119
+ + + + ++E+ +E R + + ER +E
Sbjct: 499 ERQQREKEQREREQREKEREREAARERERERERERE 534
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 25.4 bits (53), Expect = 0.86
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 47 QKRLAEEEKILKRDQEIVAKMAKLEMWKKE 76
+KR E +++LK ++ V KM + EM KKE
Sbjct: 263 EKRKEEADEVLKEKKKEVGKMTR-EMAKKE 291
Score = 22.6 bits (46), Expect = 6.1
Identities = 19/79 (24%), Positives = 33/79 (41%)
Query: 20 RADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRN 79
R I + + ES P M + +Q+ A+ +R+ I +KLE K L +
Sbjct: 936 RQTILMQAKMESIEIPLLQGSMDDIGQQEYAADGGSAYERESRIEIDYSKLEHHLKNLSD 995
Query: 80 KVAKKTAEAQAAKDKKERL 98
K + AK+ + +L
Sbjct: 996 PDQIKKSGDSLAKELQSKL 1014
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
TPR-containing phosphoprotein protein.
Length = 1200
Score = 25.4 bits (53), Expect = 0.86
Identities = 13/51 (25%), Positives = 29/51 (56%)
Query: 54 EKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKERLVEEVRR 104
+ +L++ Q V++ K++ ++ LR K + E + + + R +EE+RR
Sbjct: 817 QDLLQQAQYHVSRARKIDEEERSLRQKQELEREEFKRRQAEDRRRMEEMRR 867
Score = 23.8 bits (49), Expect = 2.6
Identities = 12/58 (20%), Positives = 28/58 (48%)
Query: 39 QEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKE 96
Q +R +++ EEE+ L++ QE+ + K + R + ++ A + ++E
Sbjct: 822 QAQYHVSRARKIDEEERSLRQKQELEREEFKRRQAEDRRRMEEMRRKAHEEMLLKRQE 879
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 24.2 bits (50), Expect = 2.0
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 26 KLEYESEAYPFTIQEMMETTRQKRLAEE--EKILKRDQEIVAKMAKLEMWKKELRNKVAK 83
KLE + A + E+ TT + A ++ +K+ +E + +K K R+K+ K
Sbjct: 840 KLEEQIAALQQRLVEVSGTTDEMTAAVTALKQQIKQHKEKMNSQSKELKAKYHQRDKLLK 899
Query: 84 KTAEAQAAKDKKERLVEEVR 103
+ E + KKE + +VR
Sbjct: 900 QNDELKLEIKKKENEITKVR 919
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 24.2 bits (50), Expect = 2.0
Identities = 8/15 (53%), Positives = 14/15 (93%)
Query: 37 TIQEMMETTRQKRLA 51
T+++++E TRQKR+A
Sbjct: 1607 TVRQLLERTRQKRMA 1621
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.4 bits (48), Expect = 3.5
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 37 TIQEMMETTRQKRLA 51
T+++ +E TRQKR+A
Sbjct: 1604 TVRQFLERTRQKRMA 1618
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 23.0 bits (47), Expect = 4.6
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 39 QEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDK 94
Q+M + K L + + LK+ + K + E + K+ K+ AE KDK
Sbjct: 957 QKMSLKSLFKELEKANQHLKKYNHVNKKALDQFLSFSEQKEKLYKRKAELDVGKDK 1012
Score = 22.2 bits (45), Expect = 8.0
Identities = 11/48 (22%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 52 EEEKILKRD-QEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKDKKERL 98
+E+ +L + Q+++ + KL++ +L ++V + A+ + ERL
Sbjct: 286 DEKSVLATEHQQLLREKTKLDLTISDLSDEVQGDNKSKERAEQELERL 333
>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
protein.
Length = 1087
Score = 22.2 bits (45), Expect = 8.0
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 57 LKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAA 91
+KR+ E+ AK++ W +E R A A A AA
Sbjct: 1026 VKRNDEL---KAKIDAWMREKRASHAATLAAAAAA 1057
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.312 0.126 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,623
Number of Sequences: 2123
Number of extensions: 3325
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 13
length of query: 159
length of database: 516,269
effective HSP length: 59
effective length of query: 100
effective length of database: 391,012
effective search space: 39101200
effective search space used: 39101200
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)
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