Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001102-TA|BGIBMGA001102-PA|IPR013234|PIGA, GPI anchor
biosynthesis, IPR001296|Glycosyl transferase, group 1
(431 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_1090 - 10009008-10009098,10009336-10009439,10009608-100097... 438 e-123
07_01_0003 + 16711-17016,17107-17177,17269-17461,17929-17984,185... 56 4e-08
01_01_0277 + 2274383-2274465,2274889-2274955,2275040-2275110,227... 52 1e-06
01_06_0097 + 26413647-26415101 51 2e-06
03_02_0467 + 8707777-8707892,8708030-8708096,8708190-8708260,870... 50 5e-06
11_01_0807 - 7178278-7178548,7178629-7178756,7178847-7179815,718... 40 0.003
01_06_1818 - 40093327-40093384,40093501-40093580,40093661-400939... 38 0.021
08_02_0104 + 12404890-12405129,12405244-12405333,12405953-124060... 36 0.083
07_03_1274 + 25377018-25377127,25377673-25377802,25377898-253780... 33 0.33
06_01_0661 - 4807712-4807759,4807857-4807995,4808107-4808351,480... 33 0.33
02_05_1336 + 35773629-35773856,35773931-35774085,35774217-357745... 33 0.44
04_03_0297 + 14060687-14060787,14061341-14061473,14061566-140617... 33 0.58
04_03_0029 - 9714031-9714072,9714196-9714219,9714343-9714406,971... 33 0.58
02_01_0627 + 4708648-4708836,4708975-4709064,4709579-4709664,471... 31 1.3
06_03_0908 - 25858909-25859185,25859765-25859892,25860061-258607... 31 1.8
03_03_0279 - 16134422-16134608,16134703-16134947,16135046-161353... 31 1.8
03_02_0948 - 12645972-12646010,12646612-12646750,12646846-126470... 31 1.8
02_05_0726 - 31252210-31253166,31253667-31253840,31254320-312543... 31 2.4
12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845 30 3.1
06_01_0230 + 1765913-1766251,1766365-1766445,1766553-1766651,176... 30 4.1
07_01_0927 - 7784564-7784656,7785182-7785225,7785946-7785970,778... 29 5.4
01_01_1120 - 8884760-8885017,8886088-8886150,8887365-8887627,888... 29 7.2
07_01_0861 + 7152976-7153061,7153222-7153310,7154862-7155013,715... 29 9.5
>07_01_1090 -
10009008-10009098,10009336-10009439,10009608-10009724,
10009826-10009916,10010581-10010735,10010970-10011542,
10011851-10011992,10012080-10012123
Length = 438
Score = 438 bits (1078), Expect = e-123
Identities = 204/389 (52%), Positives = 277/389 (71%), Gaps = 3/389 (0%)
Query: 1 MDTRKKRQVVCMASDFFYPNTGGVEEHIFNLSQCLIKRGHKVIVLTHSYGDRVGIRYLTA 60
MD R ++ + M SDFF+PN GGVE HI+ LSQCL+K GHKVIV+TH+YG+R G+RY+T
Sbjct: 22 MDGRGRKHRILMVSDFFFPNFGGVESHIYYLSQCLLKLGHKVIVMTHAYGNRSGVRYVTG 81
Query: 61 GLKVYYLPIRVFYAQCVLPTMICNIALIRNILIRECIEIVHGHSAFSVLCHEVCIIGKLM 120
GLKVYY+P + F Q LPT+ ++R ILIRE I +VHGH AFS LCHE + + M
Sbjct: 82 GLKVYYVPWKPFLMQNTLPTLFLTFPIVRTILIREKISVVHGHQAFSTLCHEALMHARTM 141
Query: 121 GLKTVFTDHSLFGFADTSAVLTNKYLQICLSEIDHCICVSHTGKENTVLRAKVQAHKVSV 180
G K VFTDHSL+GFAD ++ NK LQ L++ID ICVSHT KENTVLR+ + KV +
Sbjct: 142 GYKVVFTDHSLYGFADAGSIHMNKVLQFTLADIDQAICVSHTSKENTVLRSGISPEKVFM 201
Query: 181 IPNAVDAFSFIPDPCQRDQKFITIVIVSRLVYRKGVNLMAAVIADMCPRYPNLRFIIGGD 240
+PNAVD F P P + I IV++SRLVYRKG +L+ VI ++C +P +RFI+GGD
Sbjct: 202 VPNAVDTAMFTPSPDRLSCDEIVIVVISRLVYRKGADLLVEVIPEVCRLFPKVRFIVGGD 261
Query: 241 GPKMWLLQEVREKIGCQESVRLLGSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAAC 300
GPK ++E+REK Q+ V +LG++ H+++R+VL+ G IFLN+SLTEA+C+AI+EAA+C
Sbjct: 262 GPKRVRIEEMREKFSLQDRVEMLGAVPHAQVRSVLISGHIFLNSSLTEAFCIAILEAASC 321
Query: 301 GLKVVSTKVGGIPEVLPESMIYLTEPNVGSLVRGIEKAITDIKEGNIMCPFKCNRLVREM 360
GL VST+VGG+PEVLP+ M+ L EP +VR + KAI D+ G + P + ++++
Sbjct: 322 GLLTVSTRVGGVPEVLPDDMVVLAEPAPEDMVRAVRKAI-DMLPG--IDPQVMHLRMKKL 378
Query: 361 YSWMDITKRTEGVYDRILLNKNKPLGQQL 389
YSW D+ KRTE VYDR + + L ++L
Sbjct: 379 YSWDDVAKRTEIVYDRAMQSPQTDLLERL 407
>07_01_0003 +
16711-17016,17107-17177,17269-17461,17929-17984,
18511-18588,18873-18929,19396-19903
Length = 422
Score = 56.4 bits (130), Expect = 4e-08
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 17/172 (9%)
Query: 204 IVIVSRLVYRKGVNLMAAVIADMCPRYPNLRFIIGGDGPKMWLLQEVREKIGCQESVRLL 263
I+ V RL K ++ + V+ R P R GDGP E++ +V
Sbjct: 218 ILYVGRLGVEKSLDFLKRVM----DRLPGSRIAFVGDGP---FRAELQLMFTGMPAV-FT 269
Query: 264 GSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAACGLKVVSTKVGGIPEVLPE----- 318
G+L+ E+ GD+F+ S +E ++EA + G+ VV+ + GGIP+++PE
Sbjct: 270 GTLQGEELSQAYASGDVFVMPSESETLGFVVLEAMSSGVPVVAARAGGIPDIIPEDQEGK 329
Query: 319 -SMIYLTEPNVGSLVRGIEKAITDIKEGNIMCPFKCNRLVREMYSWMDITKR 369
S +Y T +V V IE+ +T + M K R E + W T++
Sbjct: 330 TSFLY-TPGDVDDCVSKIERLLTCEELRETM--RKAARKEMEKFDWRAATRK 378
>01_01_0277 +
2274383-2274465,2274889-2274955,2275040-2275110,
2275550-2275667,2275755-2275828,2276094-2276149,
2276237-2276320,2276422-2276509,2276602-2276679,
2276814-2276870,2277074-2277578
Length = 426
Score = 51.6 bits (118), Expect = 1e-06
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 204 IVIVSRLVYRKGVNLMAAVIADMCPRYPNLRFIIGGDGPKMWLLQEVREKIGCQESVRLL 263
I+ V R K ++ + V+ R P +R GDGP L+++ E +
Sbjct: 223 IIHVGRFGREKNLDFLKTVM----DRLPGVRIAFIGDGPYRSELEKMFEGMPAV----FT 274
Query: 264 GSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAACGLKVVSTKVGGIPEVLPE 318
G ++ E+ GD+F+ S +E ++E+ + G+ VV+ + GG+P+++PE
Sbjct: 275 GMMQGEELSQAYASGDVFVMPSESETLGQVVLESMSSGVPVVAARAGGVPDIIPE 329
>01_06_0097 + 26413647-26415101
Length = 484
Score = 51.2 bits (117), Expect = 2e-06
Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 19/183 (10%)
Query: 172 KVQAHKVSVIPNAVDAFSFIPDPC-----QRD---QKFITIV--IVSRLVYRKGVNLMAA 221
++ + +V VI N VD F PD + D K +V + RLV KG L+
Sbjct: 259 QIPSRRVHVILNGVDEAQFEPDAALGRAFREDLGLPKGADLVFGVSGRLVKDKGHPLLYE 318
Query: 222 VIADMCPRYPNLRFIIGGDGPKMWLLQEVREKIGCQESVRLLGSLKHSEIRNVLVKGDIF 281
+ + R+PN+ ++ G GP W ++ +G + ++LG++ +++ D+F
Sbjct: 319 AFSKLVLRHPNVYLLVAGKGP--W--EQRYMDLG--RNAKVLGAVPPEKLKAFYNALDVF 372
Query: 282 LNTSL-TEAYCMAIVEAAACGLKVVSTKVGGIPE--VLPESMIYLTEPNVGSLVRGIEKA 338
++ +L + + ++EA CG V++T+ I V+ + Y+ PNV SL+ +E
Sbjct: 373 VDPTLRPQGLDLTLMEAMQCGKPVLATRFPSIKGSIVVDDEFGYMFAPNVESLLEKLEAV 432
Query: 339 ITD 341
+ +
Sbjct: 433 VEE 435
>03_02_0467 +
8707777-8707892,8708030-8708096,8708190-8708260,
8708629-8708746,8708820-8708893,8709278-8709333,
8709448-8709531,8709611-8709698,8709786-8709863,
8710335-8710391,8710606-8711044
Length = 415
Score = 49.6 bits (113), Expect = 5e-06
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 204 IVIVSRLVYRKGVNLMAAVIADMCPRYPNLRFIIGGDGPKMWLLQEVREKIGCQESVRLL 263
I+ V R K ++ + V+ R P +R GDGP L E++
Sbjct: 234 IIHVGRFGREKNLDFLKRVME----RLPGVRIAFVGDGPYRAEL----ERMFTGMPAVFT 285
Query: 264 GSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAACGLKVVSTKVGGIPEVLP-----E 318
G L+ E+ GD+F S +E ++E+ A G+ VV+ + GGIP+++P +
Sbjct: 286 GMLQGEELSQAYASGDLFAMPSESETLGQVVLESMASGVPVVAARAGGIPDIIPKDKEGK 345
Query: 319 SMIYLTEPNVGSLVRGIEKAIT 340
+ T ++ VR IE+ ++
Sbjct: 346 TSFLFTPGDLDECVRKIEQLLS 367
>11_01_0807 -
7178278-7178548,7178629-7178756,7178847-7179815,
7180465-7180518,7180622-7180798,7180913-7181926,
7182038-7182101,7182247-7182563,7182797-7182847
Length = 1014
Score = 40.3 bits (90), Expect = 0.003
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 280 IFLNTSLTEAYCMAIVEAAACGLKVVSTKVGGIPEVL 316
+F+N +L E + + I+EAAA GL VV+TK GG ++L
Sbjct: 543 VFINPALVEPFGLTIIEAAAYGLPVVATKNGGPVDIL 579
>01_06_1818 -
40093327-40093384,40093501-40093580,40093661-40093946,
40095007-40095291,40095386-40095513,40095625-40096560,
40096650-40096712,40096801-40096854,40096963-40097139,
40097452-40097583,40097666-40097785,40097935-40098627,
40098760-40099158,40099263-40099271
Length = 1139
Score = 37.5 bits (83), Expect = 0.021
Identities = 17/36 (47%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 276 VKGDIFLNTSLTEAYCMAIVEAAACGLKVVSTKVGG 311
+KG +F+N +L E + + ++EAAA GL +V+TK GG
Sbjct: 509 MKG-VFINPALVEPFGLTLIEAAAHGLPIVATKNGG 543
>08_02_0104 +
12404890-12405129,12405244-12405333,12405953-12406036,
12406888-12407132,12409032-12409095,12409270-12409968,
12410063-12410176,12410287-12410418,12410594-12410770,
12411085-12411138,12411230-12411292,12411396-12412307,
12412408-12412535,12413680-12413962
Length = 1094
Score = 35.5 bits (78), Expect = 0.083
Identities = 17/64 (26%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 280 IFLNTSLTEAYCMAIVEAAACGLKVVSTKVGGIPEV--LPESMIYLTEPNVGSLVRGIEK 337
+F+N + E + + ++EAAA GL +V+T+ GG ++ + ++ I + N + + K
Sbjct: 617 VFINCAFIEPFGLTLIEAAAYGLPMVATRNGGPVDIHRVLDNGILVDPHNQNEIAEALYK 676
Query: 338 AITD 341
++D
Sbjct: 677 LVSD 680
>07_03_1274 +
25377018-25377127,25377673-25377802,25377898-25378049,
25378135-25378327,25378505-25378623,25378711-25378927,
25379038-25379133,25379249-25379422,25379530-25379646,
25379742-25379908,25379987-25380211,25380299-25380617,
25380703-25380947,25381042-25381180,25381277-25381324
Length = 816
Score = 33.5 bits (73), Expect = 0.33
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 281 FLNTSLTEAYCMAIVEAAACGLKVVSTKVGGIPEVL 316
F+ +L EA+ + ++EA CGL +T GG E++
Sbjct: 671 FVQPALYEAFGLTVIEAMTCGLPTFATAYGGPAEII 706
>06_01_0661 -
4807712-4807759,4807857-4807995,4808107-4808351,
4808482-4808800,4809140-4809364,4809453-4809619,
4809702-4809818,4809903-4810076,4810173-4810268,
4810351-4810567,4810663-4810781,4810931-4811123,
4811207-4811358,4811448-4811568,4811980-4812074
Length = 808
Score = 33.5 bits (73), Expect = 0.33
Identities = 12/41 (29%), Positives = 25/41 (60%)
Query: 280 IFLNTSLTEAYCMAIVEAAACGLKVVSTKVGGIPEVLPESM 320
+F+ + EA+ + ++EA CGL ++T GG E++ + +
Sbjct: 662 VFVQPAFYEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGV 702
>02_05_1336 +
35773629-35773856,35773931-35774085,35774217-35774549,
35774615-35774927,35776992-35777168,35777281-35777397,
35777532-35777698,35777800-35778024,35778127-35778448,
35778542-35778786,35778993-35779131,35779212-35779304,
35779509-35779577
Length = 860
Score = 33.1 bits (72), Expect = 0.44
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 281 FLNTSLTEAYCMAIVEAAACGLKVVSTKVGGIPEVLPESM 320
F+ +L EA+ + ++EA CGL +T GG E++ + +
Sbjct: 677 FVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDEV 716
>04_03_0297 +
14060687-14060787,14061341-14061473,14061566-14061720,
14061850-14062042,14062130-14062248,14062332-14062548,
14062670-14062765,14062908-14063084,14063175-14063291,
14063398-14063564,14063680-14063904,14064052-14064373,
14064624-14064868,14065227-14065290,14065414-14065437,
14065561-14065602
Length = 798
Score = 32.7 bits (71), Expect = 0.58
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 281 FLNTSLTEAYCMAIVEAAACGLKVVSTKVGGIPEVL 316
F+ +L EA+ + ++EA CGL +T GG E++
Sbjct: 672 FVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEII 707
>04_03_0029 -
9714031-9714072,9714196-9714219,9714343-9714406,
9714763-9715007,9715258-9715579,9715727-9715951,
9716067-9716233,9716340-9716456,9716547-9716723,
9716866-9716961,9717083-9717299,9717385-9717503,
9717591-9717783,9717913-9718067,9718160-9718292,
9718846-9718946
Length = 798
Score = 32.7 bits (71), Expect = 0.58
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 281 FLNTSLTEAYCMAIVEAAACGLKVVSTKVGGIPEVL 316
F+ +L EA+ + ++EA CGL +T GG E++
Sbjct: 672 FVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEII 707
>02_01_0627 +
4708648-4708836,4708975-4709064,4709579-4709664,
4710108-4710332,4711251-4711314,4711793-4712491,
4712657-4712764,4712920-4713051,4713183-4713359,
4713920-4713973,4714072-4714134,4714227-4714928,
4715048-4715175,4715563-4715839
Length = 997
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 267 KHSEIRNVL-----VKGDIFLNTSLTEAYCMAIVEAAACGLKVVSTKVGGIPEV 315
KHSE+ ++ KG F+N + E + + ++EAA GL +++TK G E+
Sbjct: 575 KHSEVPDIYRLAARTKG-AFVNVAYFEQFGVTLIEAAMNGLPIIATKNGAPVEI 627
>06_03_0908 -
25858909-25859185,25859765-25859892,25860061-25860765,
25860882-25860944,25861031-25861084,25861338-25861514,
25861644-25861813,25862011-25862065,25862220-25862918,
25863110-25863173,25863515-25863723,25866138-25866227,
25866390-25866617
Length = 972
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 267 KHSEIRNVL-----VKGDIFLNTSLTEAYCMAIVEAAACGLKVVSTKVGGIPEV 315
KHSE+ ++ KG F+N E + + ++EAA GL V++TK G E+
Sbjct: 549 KHSEVPDIYRLAVRTKG-AFVNVPYFEQFGVTLIEAAMHGLPVIATKNGAPVEI 601
>03_03_0279 -
16134422-16134608,16134703-16134947,16135046-16135364,
16135451-16135675,16135780-16135946,16136030-16136146,
16136234-16136407,16136489-16136584,16136669-16136885,
16137005-16137123,16137249-16137441,16137562-16137713,
16137809-16137938,16138667-16138776
Length = 816
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 281 FLNTSLTEAYCMAIVEAAACGLKVVSTKVGGIPEVL 316
F+ + EA+ + +VE+ CGL +T GG E++
Sbjct: 671 FVQPAFYEAFGLTVVESMTCGLPTFATAYGGPAEII 706
>03_02_0948 -
12645972-12646010,12646612-12646750,12646846-12647090,
12647184-12647505,12647781-12648005,12648185-12648351,
12648428-12648544,12648989-12649162,12649372-12649467,
12649624-12649840,12650267-12650385,12650478-12650670,
12651212-12651363,12651485-12651611,12651731-12651828
Length = 809
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 281 FLNTSLTEAYCMAIVEAAACGLKVVSTKVGGIPEVL 316
F+ + EA+ + +VEA CGL +T GG E++
Sbjct: 667 FVQPAFYEAFGLTVVEAMTCGLPTFATVHGGPAEII 702
>02_05_0726 -
31252210-31253166,31253667-31253840,31254320-31254364,
31254463-31254573,31254669-31254746,31255170-31255234,
31255358-31255733,31256891-31257035,31257308-31257462,
31259036-31259182
Length = 750
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 9 VVCMASDFF-YPNTGGVEEHIFNLSQCLIKRGHKVIVLTHSYGD 51
V+ +AS+ + TGG+ + + L + L +RGH+V+V+ YG+
Sbjct: 261 VIVVASECSPFCKTGGLGDVVGALPKALARRGHRVMVVIPRYGE 304
>12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845
Length = 170
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 232 NLRFIIGGDGPKMWLLQEVREKIGCQESVRLLGSLKHSEIRNVLVKGDI 280
NL+ + ++ +Q +R K G + ++GS+K ++ R + KGD+
Sbjct: 57 NLKVVDNSGAKRVMCIQSLRGKKGARLGDTIIGSVKEAQPRGKVKKGDV 105
>06_01_0230 +
1765913-1766251,1766365-1766445,1766553-1766651,
1766748-1766837,1766937-1767000,1767093-1767193,
1767284-1767393,1767515-1767758,1767852-1768052,
1768296-1768487,1768594-1768680,1768790-1768918,
1769276-1769392
Length = 617
Score = 29.9 bits (64), Expect = 4.1
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Query: 198 DQKFITIVIVSRLVYRKGVNLMAAVIADMCPRYPNLRFIIGGDGPKMW--LLQEVREKIG 255
D+K I + RL +KG ++MAA I ++ +++ ++ G G K + LL+ + EK
Sbjct: 405 DRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE--DVQIVLLGTGKKKFEKLLKSMEEKY- 461
Query: 256 CQESVRLLGSLKHSEIRNVLVKGDIFLNTSLTEAYCMAIVEAAACGLKVVSTKVGGIPEV 315
VR + ++ D+ S E + ++ G GG+ +
Sbjct: 462 -PGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDT 520
Query: 316 LPE 318
+ E
Sbjct: 521 VIE 523
>07_01_0927 -
7784564-7784656,7785182-7785225,7785946-7785970,
7786357-7786497,7786590-7786619,7786686-7786762,
7786816-7786855,7787055-7787122,7787782-7789864
Length = 866
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 263 LGSLKHSEIRNVLVKGDIFLNTSLTEAYC-MAIVEAAA 299
LG H + ++GD F+ +SL + YC ++EAAA
Sbjct: 262 LGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAA 299
>01_01_1120 -
8884760-8885017,8886088-8886150,8887365-8887627,
8887728-8887882,8888194-8888465,8889593-8889735,
8890150-8890444
Length = 482
Score = 29.1 bits (62), Expect = 7.2
Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 9/138 (6%)
Query: 247 LQEVREKIGCQESVRLLGSLKHSEIRNVLVKGDIFLNTSLTEAYCMA--IVEAAACGLKV 304
L++ K G Q+ V + K + L D+ + S C +EA A L V
Sbjct: 339 LRDFAVKNGIQDRVHFVN--KTLAVAPYLAATDVLVQNSQARGECFGRITIEAMAFKLPV 396
Query: 305 VSTKVGGIPEVLPESMIYLTEP----NVGSLVRGIEKAITDIKEGNIMCPFKCNRLVREM 360
+ T GG E++ + L P V L + + + + +E + K V+EM
Sbjct: 397 LGTAAGGTTEIVVDGSTGLLHPAGKEGVAPLAKNMVR-LASHEEDRVSMGRKGYGRVKEM 455
Query: 361 YSWMDITKRTEGVYDRIL 378
+ + R V +L
Sbjct: 456 FMEHHMAGRIAAVLQEVL 473
>07_01_0861 +
7152976-7153061,7153222-7153310,7154862-7155013,
7155254-7155382,7155465-7155581,7156353-7156496,
7156749-7156851,7157471-7157565,7157953-7158096
Length = 352
Score = 28.7 bits (61), Expect = 9.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 230 YPNLRFIIGGDGPKMWLLQEVREKIGCQESVRLLGSLKHSE 270
YPN F+ GP+ L+ V GC+ +R GS+K ++
Sbjct: 150 YPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDAD 190
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.327 0.142 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,940,859
Number of Sequences: 37544
Number of extensions: 483648
Number of successful extensions: 1226
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1202
Number of HSP's gapped (non-prelim): 27
length of query: 431
length of database: 14,793,348
effective HSP length: 84
effective length of query: 347
effective length of database: 11,639,652
effective search space: 4038959244
effective search space used: 4038959244
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 61 (28.7 bits)
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